EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002058 (Gene tree)
Gene ID: 102237955
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 13427 bases
Position: chr12:24118583-24132009
Accession: 102237955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002083	ResIII	PF04851.15	6e-26	1	2
ENSXMAP00000002083	ResIII	PF04851.15	6e-26	2	2
ENSXMAP00000002083	DEAD	PF00270.29	4.3e-53	1	2
ENSXMAP00000002083	DEAD	PF00270.29	4.3e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002088	-	5712	XM_005804353	ENSXMAP00000002083	1903 (aa)	XP_005804410	M3ZIP1

Gene Model

Click here to download ENSXMAG00000002058's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002058	snrnp200	98	90.471	ENSG00000144028	SNRNP200	97	90.471	Homo_sapiens
ENSXMAG00000002058	snrnp200	98	97.428	ENSAPOG00000010223	snrnp200	97	97.428	Acanthochromis_polyacanthus
ENSXMAG00000002058	snrnp200	98	90.525	ENSAMEG00000008996	SNRNP200	97	90.525	Ailuropoda_melanoleuca
ENSXMAG00000002058	snrnp200	98	96.277	ENSACIG00000001764	snrnp200	99	96.277	Amphilophus_citrinellus
ENSXMAG00000002058	snrnp200	98	97.320	ENSAOCG00000024593	snrnp200	99	96.890	Amphiprion_ocellaris
ENSXMAG00000002058	snrnp200	98	96.997	ENSAPEG00000012554	snrnp200	99	96.997	Amphiprion_percula
ENSXMAG00000002058	snrnp200	98	97.267	ENSATEG00000022522	snrnp200	97	97.267	Anabas_testudineus
ENSXMAG00000002058	snrnp200	98	90.685	ENSAPLG00000004313	SNRNP200	98	90.685	Anas_platyrhynchos
ENSXMAG00000002058	snrnp200	97	89.862	ENSACAG00000000434	SNRNP200	97	89.862	Anolis_carolinensis
ENSXMAG00000002058	snrnp200	98	86.546	ENSANAG00000036625	SNRNP200	97	86.065	Aotus_nancymaae
ENSXMAG00000002058	snrnp200	98	96.999	ENSACLG00000011188	snrnp200	97	96.999	Astatotilapia_calliptera
ENSXMAG00000002058	snrnp200	98	94.159	ENSAMXG00000005684	snrnp200	97	94.159	Astyanax_mexicanus
ENSXMAG00000002058	snrnp200	98	90.257	ENSBTAG00000000848	SNRNP200	97	90.257	Bos_taurus
ENSXMAG00000002058	snrnp200	98	90.471	ENSCJAG00000007514	SNRNP200	97	90.471	Callithrix_jacchus
ENSXMAG00000002058	snrnp200	99	89.096	ENSCAFG00020019979	SNRNP200	99	91.917	Canis_lupus_dingo
ENSXMAG00000002058	snrnp200	98	90.257	ENSCHIG00000020611	SNRNP200	97	90.257	Capra_hircus
ENSXMAG00000002058	snrnp200	98	90.525	ENSTSYG00000010467	SNRNP200	97	90.525	Carlito_syrichta
ENSXMAG00000002058	snrnp200	98	90.069	ENSCAPG00000017234	SNRNP200	98	90.069	Cavia_aperea
ENSXMAG00000002058	snrnp200	98	90.310	ENSCPOG00000006776	SNRNP200	97	90.310	Cavia_porcellus
ENSXMAG00000002058	snrnp200	98	90.471	ENSCCAG00000033962	SNRNP200	97	90.471	Cebus_capucinus
ENSXMAG00000002058	snrnp200	98	90.471	ENSCATG00000015790	SNRNP200	97	90.471	Cercocebus_atys
ENSXMAG00000002058	snrnp200	98	90.310	ENSCLAG00000004116	SNRNP200	97	90.310	Chinchilla_lanigera
ENSXMAG00000002058	snrnp200	98	90.471	ENSCSAG00000017369	SNRNP200	97	90.471	Chlorocebus_sabaeus
ENSXMAG00000002058	snrnp200	74	92.216	ENSCHOG00000012981	-	55	92.216	Choloepus_hoffmanni
ENSXMAG00000002058	snrnp200	98	90.540	ENSCPBG00000022571	SNRNP200	97	90.540	Chrysemys_picta_bellii
ENSXMAG00000002058	snrnp200	98	76.094	ENSCING00000005082	-	97	76.201	Ciona_intestinalis
ENSXMAG00000002058	snrnp200	94	90.346	ENSCANG00000033932	SNRNP200	99	90.346	Colobus_angolensis_palliatus
ENSXMAG00000002058	snrnp200	98	90.471	ENSCGRG00001022610	Snrnp200	97	90.471	Cricetulus_griseus_chok1gshd
ENSXMAG00000002058	snrnp200	98	89.898	ENSCGRG00000016472	Snrnp200	97	89.898	Cricetulus_griseus_crigri
ENSXMAG00000002058	snrnp200	98	95.874	ENSCSEG00000016399	snrnp200	97	95.874	Cynoglossus_semilaevis
ENSXMAG00000002058	snrnp200	98	92.765	ENSCVAG00000017631	snrnp200	97	92.765	Cyprinodon_variegatus
ENSXMAG00000002058	snrnp200	98	94.373	ENSDARG00000077536	snrnp200	97	94.373	Danio_rerio
ENSXMAG00000002058	snrnp200	98	88.919	ENSDNOG00000011227	SNRNP200	97	88.919	Dasypus_novemcinctus
ENSXMAG00000002058	snrnp200	98	87.714	ENSDORG00000005861	Snrnp200	97	87.714	Dipodomys_ordii
ENSXMAG00000002058	snrnp200	98	72.964	FBgn0263599	l(3)72Ab	97	72.964	Drosophila_melanogaster
ENSXMAG00000002058	snrnp200	93	94.712	ENSETEG00000000162	SNRNP200	67	94.712	Echinops_telfairi
ENSXMAG00000002058	snrnp200	82	81.166	ENSEBUG00000016524	snrnp200	95	81.166	Eptatretus_burgeri
ENSXMAG00000002058	snrnp200	98	89.291	ENSEASG00005001884	SNRNP200	97	89.185	Equus_asinus_asinus
ENSXMAG00000002058	snrnp200	98	90.471	ENSECAG00000019675	SNRNP200	97	90.471	Equus_caballus
ENSXMAG00000002058	snrnp200	90	89.175	ENSEEUG00000012178	SNRNP200	89	89.196	Erinaceus_europaeus
ENSXMAG00000002058	snrnp200	98	95.608	ENSELUG00000018948	snrnp200	97	95.608	Esox_lucius
ENSXMAG00000002058	snrnp200	98	90.525	ENSFCAG00000010699	SNRNP200	97	90.525	Felis_catus
ENSXMAG00000002058	snrnp200	92	85.027	ENSFALG00000001368	-	93	85.027	Ficedula_albicollis
ENSXMAG00000002058	snrnp200	98	90.310	ENSFDAG00000004683	SNRNP200	97	90.310	Fukomys_damarensis
ENSXMAG00000002058	snrnp200	98	96.088	ENSFHEG00000003786	snrnp200	97	96.088	Fundulus_heteroclitus
ENSXMAG00000002058	snrnp200	98	94.807	ENSGMOG00000004881	snrnp200	97	94.647	Gadus_morhua
ENSXMAG00000002058	snrnp200	98	96.785	ENSGAFG00000010807	snrnp200	97	96.785	Gambusia_affinis
ENSXMAG00000002058	snrnp200	98	96.843	ENSGACG00000011474	snrnp200	97	96.843	Gasterosteus_aculeatus
ENSXMAG00000002058	snrnp200	91	93.950	ENSGAGG00000016069	SNRNP200	98	90.252	Gopherus_agassizii
ENSXMAG00000002058	snrnp200	98	90.471	ENSGGOG00000005174	SNRNP200	97	92.560	Gorilla_gorilla
ENSXMAG00000002058	snrnp200	98	94.335	ENSHBUG00000011322	snrnp200	99	94.335	Haplochromis_burtoni
ENSXMAG00000002058	snrnp200	98	90.310	ENSHGLG00000006654	SNRNP200	97	90.310	Heterocephalus_glaber_female
ENSXMAG00000002058	snrnp200	98	90.310	ENSHGLG00100018594	SNRNP200	97	90.310	Heterocephalus_glaber_male
ENSXMAG00000002058	snrnp200	98	90.525	ENSSTOG00000016351	SNRNP200	97	90.525	Ictidomys_tridecemlineatus
ENSXMAG00000002058	snrnp200	98	90.310	ENSJJAG00000023659	Snrnp200	97	90.310	Jaculus_jaculus
ENSXMAG00000002058	snrnp200	98	94.608	ENSKMAG00000003665	snrnp200	97	94.608	Kryptolebias_marmoratus
ENSXMAG00000002058	snrnp200	98	97.320	ENSLBEG00000021585	snrnp200	97	97.320	Labrus_bergylta
ENSXMAG00000002058	snrnp200	80	92.529	ENSLACG00000000226	SNRNP200	99	92.529	Latimeria_chalumnae
ENSXMAG00000002058	snrnp200	98	93.683	ENSLOCG00000015198	snrnp200	97	93.683	Lepisosteus_oculatus
ENSXMAG00000002058	snrnp200	98	90.203	ENSLAFG00000015626	SNRNP200	97	90.203	Loxodonta_africana
ENSXMAG00000002058	snrnp200	98	90.418	ENSMFAG00000040174	SNRNP200	99	92.151	Macaca_fascicularis
ENSXMAG00000002058	snrnp200	98	90.418	ENSMMUG00000023261	SNRNP200	97	90.418	Macaca_mulatta
ENSXMAG00000002058	snrnp200	98	90.364	ENSMNEG00000032398	SNRNP200	97	90.364	Macaca_nemestrina
ENSXMAG00000002058	snrnp200	98	90.471	ENSMLEG00000019083	SNRNP200	99	92.151	Mandrillus_leucophaeus
ENSXMAG00000002058	snrnp200	98	96.251	ENSMAMG00000007851	snrnp200	97	96.197	Mastacembelus_armatus
ENSXMAG00000002058	snrnp200	98	94.335	ENSMZEG00005010787	snrnp200	99	94.335	Maylandia_zebra
ENSXMAG00000002058	snrnp200	97	90.378	ENSMGAG00000001831	SNRNP200	99	90.386	Meleagris_gallopavo
ENSXMAG00000002058	snrnp200	98	90.525	ENSMAUG00000011825	Snrnp200	97	90.525	Mesocricetus_auratus
ENSXMAG00000002058	snrnp200	98	90.525	ENSMICG00000004710	SNRNP200	98	91.831	Microcebus_murinus
ENSXMAG00000002058	snrnp200	98	88.490	ENSMOCG00000011814	Snrnp200	97	88.490	Microtus_ochrogaster
ENSXMAG00000002058	snrnp200	98	94.855	ENSMMOG00000014167	snrnp200	97	94.855	Mola_mola
ENSXMAG00000002058	snrnp200	98	90.525	ENSMODG00000008475	SNRNP200	97	90.525	Monodelphis_domestica
ENSXMAG00000002058	snrnp200	98	96.838	ENSMALG00000001973	snrnp200	97	96.838	Monopterus_albus
ENSXMAG00000002058	snrnp200	98	90.364	MGP_CAROLIEiJ_G0024250	Snrnp200	97	90.364	Mus_caroli
ENSXMAG00000002058	snrnp200	98	90.418	ENSMUSG00000003660	Snrnp200	97	90.418	Mus_musculus
ENSXMAG00000002058	snrnp200	98	90.418	MGP_PahariEiJ_G0025695	Snrnp200	97	90.418	Mus_pahari
ENSXMAG00000002058	snrnp200	98	90.418	MGP_SPRETEiJ_G0025170	Snrnp200	96	95.172	Mus_spretus
ENSXMAG00000002058	snrnp200	98	90.471	ENSMPUG00000008949	SNRNP200	97	90.471	Mustela_putorius_furo
ENSXMAG00000002058	snrnp200	98	89.898	ENSMLUG00000010493	SNRNP200	97	89.898	Myotis_lucifugus
ENSXMAG00000002058	snrnp200	98	87.206	ENSMLUG00000027511	-	97	87.206	Myotis_lucifugus
ENSXMAG00000002058	snrnp200	98	90.471	ENSNGAG00000021993	Snrnp200	97	90.471	Nannospalax_galili
ENSXMAG00000002058	snrnp200	90	96.922	ENSNBRG00000017960	snrnp200	98	96.922	Neolamprologus_brichardi
ENSXMAG00000002058	snrnp200	98	85.608	ENSNLEG00000000025	SNRNP200	97	85.661	Nomascus_leucogenys
ENSXMAG00000002058	snrnp200	97	89.172	ENSMEUG00000010532	SNRNP200	71	89.172	Notamacropus_eugenii
ENSXMAG00000002058	snrnp200	97	89.396	ENSOPRG00000015464	SNRNP200	96	89.408	Ochotona_princeps
ENSXMAG00000002058	snrnp200	98	90.257	ENSODEG00000008366	SNRNP200	97	90.257	Octodon_degus
ENSXMAG00000002058	snrnp200	98	97.053	ENSONIG00000010714	snrnp200	97	97.053	Oreochromis_niloticus
ENSXMAG00000002058	snrnp200	98	90.418	ENSOCUG00000009864	SNRNP200	97	90.418	Oryctolagus_cuniculus
ENSXMAG00000002058	snrnp200	98	96.356	ENSORLG00000012286	snrnp200	99	96.510	Oryzias_latipes
ENSXMAG00000002058	snrnp200	98	96.570	ENSORLG00020004648	snrnp200	97	96.570	Oryzias_latipes_hni
ENSXMAG00000002058	snrnp200	98	96.463	ENSORLG00015019114	snrnp200	99	96.468	Oryzias_latipes_hsok
ENSXMAG00000002058	snrnp200	98	96.677	ENSOMEG00000011834	snrnp200	97	96.677	Oryzias_melastigma
ENSXMAG00000002058	snrnp200	98	90.525	ENSOGAG00000006879	SNRNP200	97	90.525	Otolemur_garnettii
ENSXMAG00000002058	snrnp200	98	89.941	ENSOARG00000013949	SNRNP200	97	89.941	Ovis_aries
ENSXMAG00000002058	snrnp200	98	90.471	ENSPPAG00000041559	SNRNP200	97	90.471	Pan_paniscus
ENSXMAG00000002058	snrnp200	98	90.525	ENSPPRG00000004435	SNRNP200	97	90.525	Panthera_pardus
ENSXMAG00000002058	snrnp200	98	90.043	ENSPTIG00000006380	SNRNP200	97	90.043	Panthera_tigris_altaica
ENSXMAG00000002058	snrnp200	98	90.471	ENSPTRG00000012230	SNRNP200	97	90.471	Pan_troglodytes
ENSXMAG00000002058	snrnp200	98	90.418	ENSPANG00000006017	SNRNP200	97	90.418	Papio_anubis
ENSXMAG00000002058	snrnp200	98	94.858	ENSPKIG00000014762	snrnp200	99	95.041	Paramormyrops_kingsleyae
ENSXMAG00000002058	snrnp200	98	89.567	ENSPSIG00000008580	SNRNP200	97	89.567	Pelodiscus_sinensis
ENSXMAG00000002058	snrnp200	98	90.364	ENSPCIG00000023050	SNRNP200	97	90.364	Phascolarctos_cinereus
ENSXMAG00000002058	snrnp200	98	99.357	ENSPFOG00000015110	snrnp200	97	99.357	Poecilia_formosa
ENSXMAG00000002058	snrnp200	97	99.505	ENSPLAG00000006711	snrnp200	99	99.505	Poecilia_latipinna
ENSXMAG00000002058	snrnp200	97	99.450	ENSPMEG00000021166	snrnp200	99	99.450	Poecilia_mexicana
ENSXMAG00000002058	snrnp200	98	99.357	ENSPREG00000008875	snrnp200	97	99.357	Poecilia_reticulata
ENSXMAG00000002058	snrnp200	98	90.471	ENSPPYG00000012068	SNRNP200	97	90.471	Pongo_abelii
ENSXMAG00000002058	snrnp200	96	95.513	ENSPCAG00000008536	SNRNP200	83	95.513	Procavia_capensis
ENSXMAG00000002058	snrnp200	98	90.471	ENSPCOG00000024608	SNRNP200	97	90.471	Propithecus_coquereli
ENSXMAG00000002058	snrnp200	93	90.658	ENSPVAG00000005860	SNRNP200	89	90.658	Pteropus_vampyrus
ENSXMAG00000002058	snrnp200	98	91.560	ENSPNYG00000017476	snrnp200	97	91.560	Pundamilia_nyererei
ENSXMAG00000002058	snrnp200	98	89.288	ENSPNAG00000010998	snrnp200	97	89.288	Pygocentrus_nattereri
ENSXMAG00000002058	snrnp200	98	90.525	ENSRNOG00000012157	Snrnp200	97	90.525	Rattus_norvegicus
ENSXMAG00000002058	snrnp200	98	90.471	ENSRBIG00000044690	-	97	90.471	Rhinopithecus_bieti
ENSXMAG00000002058	snrnp200	98	90.471	ENSRROG00000037952	-	97	90.471	Rhinopithecus_roxellana
ENSXMAG00000002058	snrnp200	98	90.471	ENSSBOG00000035471	SNRNP200	97	92.330	Saimiri_boliviensis_boliviensis
ENSXMAG00000002058	snrnp200	97	90.378	ENSSHAG00000000758	SNRNP200	99	90.386	Sarcophilus_harrisii
ENSXMAG00000002058	snrnp200	98	94.751	ENSSFOG00015018826	snrnp200	97	94.751	Scleropages_formosus
ENSXMAG00000002058	snrnp200	98	96.892	ENSSMAG00000005463	snrnp200	99	96.740	Scophthalmus_maximus
ENSXMAG00000002058	snrnp200	98	97.535	ENSSDUG00000021410	snrnp200	97	97.535	Seriola_dumerili
ENSXMAG00000002058	snrnp200	98	97.588	ENSSLDG00000010884	snrnp200	97	97.588	Seriola_lalandi_dorsalis
ENSXMAG00000002058	snrnp200	94	87.320	ENSSARG00000010728	SNRNP200	92	87.320	Sorex_araneus
ENSXMAG00000002058	snrnp200	98	90.953	ENSSPUG00000003726	-	97	90.953	Sphenodon_punctatus
ENSXMAG00000002058	snrnp200	98	97.535	ENSSPAG00000001842	snrnp200	99	96.310	Stegastes_partitus
ENSXMAG00000002058	snrnp200	99	90.271	ENSSSCG00000008127	SNRNP200	99	90.271	Sus_scrofa
ENSXMAG00000002058	snrnp200	96	82.309	ENSTGUG00000014475	-	98	82.309	Taeniopygia_guttata
ENSXMAG00000002058	snrnp200	98	96.088	ENSTRUG00000001307	snrnp200	97	96.088	Takifugu_rubripes
ENSXMAG00000002058	snrnp200	98	91.319	ENSTNIG00000004320	snrnp200	97	82.416	Tetraodon_nigroviridis
ENSXMAG00000002058	snrnp200	78	93.897	ENSTBEG00000003329	-	54	93.897	Tupaia_belangeri
ENSXMAG00000002058	snrnp200	98	90.310	ENSTTRG00000004983	SNRNP200	97	90.310	Tursiops_truncatus
ENSXMAG00000002058	snrnp200	81	82.569	ENSUAMG00000008395	-	90	82.569	Ursus_americanus
ENSXMAG00000002058	snrnp200	98	90.525	ENSUMAG00000012385	SNRNP200	97	90.525	Ursus_maritimus
ENSXMAG00000002058	snrnp200	83	94.595	ENSVPAG00000006434	SNRNP200	53	94.595	Vicugna_pacos
ENSXMAG00000002058	snrnp200	99	90.266	ENSVVUG00000026247	SNRNP200	99	90.266	Vulpes_vulpes
ENSXMAG00000002058	snrnp200	98	90.412	ENSXETG00000001243	snrnp200	97	90.412	Xenopus_tropicalis