EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002089 (Gene tree)
Gene ID: 102235674
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 7500 bases
Position: chr24:11308340-11315839
Accession: 102235674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000027913	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSXMAP00000002090	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002095	-	3126	XM_005809638	ENSXMAP00000002090	398 (aa)	XP_005809695	M3ZIP8
ENSXMAT00000033018	-	3075	XM_023329378	ENSXMAP00000027913	381 (aa)	XP_023185146	-

Gene Model

Click here to download ENSXMAG00000002089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002089	arl13b	99	82.963	ENSAPOG00000013256	arl13b	99	81.728	Acanthochromis_polyacanthus
ENSXMAG00000002089	arl13b	99	82.677	ENSACIG00000017582	arl13b	90	94.470	Amphilophus_citrinellus
ENSXMAG00000002089	arl13b	99	83.210	ENSAOCG00000002828	arl13b	99	81.975	Amphiprion_ocellaris
ENSXMAG00000002089	arl13b	100	82.519	ENSAPEG00000014654	arl13b	100	81.234	Amphiprion_percula
ENSXMAG00000002089	arl13b	99	80.149	ENSATEG00000017586	arl13b	99	79.740	Anabas_testudineus
ENSXMAG00000002089	arl13b	99	60.096	ENSACAG00000000523	ARL13B	99	59.759	Anolis_carolinensis
ENSXMAG00000002089	arl13b	99	81.360	ENSACLG00000024227	arl13b	99	81.360	Astatotilapia_calliptera
ENSXMAG00000002089	arl13b	100	73.333	ENSAMXG00000042824	arl13b	100	73.008	Astyanax_mexicanus
ENSXMAG00000002089	arl13b	94	57.937	ENSCAPG00000006764	ARL13B	79	79.293	Cavia_aperea
ENSXMAG00000002089	arl13b	98	58.122	ENSCPOG00000002558	ARL13B	97	57.360	Cavia_porcellus
ENSXMAG00000002089	arl13b	95	58.621	ENSCLAG00000006379	ARL13B	99	57.561	Chinchilla_lanigera
ENSXMAG00000002089	arl13b	99	60.000	ENSCPBG00000005599	ARL13B	98	60.000	Chrysemys_picta_bellii
ENSXMAG00000002089	arl13b	100	76.410	ENSCSEG00000005258	arl13b	99	75.258	Cynoglossus_semilaevis
ENSXMAG00000002089	arl13b	99	89.817	ENSCVAG00000001545	arl13b	91	97.826	Cyprinodon_variegatus
ENSXMAG00000002089	arl13b	99	74.346	ENSDARG00000012763	arl13b	83	88.479	Danio_rerio
ENSXMAG00000002089	arl13b	70	51.493	ENSEBUG00000006528	arl13b	90	52.239	Eptatretus_burgeri
ENSXMAG00000002089	arl13b	78	72.659	ENSEEUG00000010823	ARL13B	73	72.222	Erinaceus_europaeus
ENSXMAG00000002089	arl13b	99	56.436	ENSFALG00000001654	ARL13B	99	55.283	Ficedula_albicollis
ENSXMAG00000002089	arl13b	99	61.215	ENSFDAG00000006556	ARL13B	99	61.215	Fukomys_damarensis
ENSXMAG00000002089	arl13b	100	86.047	ENSFHEG00000016049	arl13b	100	86.047	Fundulus_heteroclitus
ENSXMAG00000002089	arl13b	94	68.156	ENSGMOG00000018628	arl13b	98	67.553	Gadus_morhua
ENSXMAG00000002089	arl13b	100	96.750	ENSGAFG00000000025	arl13b	100	96.750	Gambusia_affinis
ENSXMAG00000002089	arl13b	99	76.963	ENSGACG00000014228	arl13b	99	76.368	Gasterosteus_aculeatus
ENSXMAG00000002089	arl13b	99	59.294	ENSGAGG00000019336	ARL13B	98	59.765	Gopherus_agassizii
ENSXMAG00000002089	arl13b	99	83.375	ENSHBUG00000020619	arl13b	99	84.080	Haplochromis_burtoni
ENSXMAG00000002089	arl13b	100	77.121	ENSHCOG00000006106	arl13b	100	77.344	Hippocampus_comes
ENSXMAG00000002089	arl13b	99	84.712	ENSKMAG00000001122	arl13b	98	85.000	Kryptolebias_marmoratus
ENSXMAG00000002089	arl13b	99	78.660	ENSLBEG00000014612	arl13b	99	78.025	Labrus_bergylta
ENSXMAG00000002089	arl13b	99	66.990	ENSLOCG00000010465	arl13b	99	66.667	Lepisosteus_oculatus
ENSXMAG00000002089	arl13b	99	81.299	ENSMAMG00000021452	arl13b	99	81.481	Mastacembelus_armatus
ENSXMAG00000002089	arl13b	99	83.375	ENSMZEG00005017827	arl13b	99	84.080	Maylandia_zebra
ENSXMAG00000002089	arl13b	99	79.310	ENSMMOG00000010253	arl13b	99	79.093	Mola_mola
ENSXMAG00000002089	arl13b	99	68.434	ENSMALG00000014655	arl13b	79	92.166	Monopterus_albus
ENSXMAG00000002089	arl13b	99	60.000	MGP_CAROLIEiJ_G0020856	Arl13b	99	60.706	Mus_caroli
ENSXMAG00000002089	arl13b	99	59.390	ENSMUSG00000022911	Arl13b	99	60.329	Mus_musculus
ENSXMAG00000002089	arl13b	99	59.859	MGP_PahariEiJ_G0016561	Arl13b	99	60.329	Mus_pahari
ENSXMAG00000002089	arl13b	99	59.624	MGP_SPRETEiJ_G0021763	Arl13b	99	60.563	Mus_spretus
ENSXMAG00000002089	arl13b	95	60.049	ENSMLUG00000017473	ARL13B	95	60.391	Myotis_lucifugus
ENSXMAG00000002089	arl13b	99	80.353	ENSNBRG00000004078	arl13b	87	94.009	Neolamprologus_brichardi
ENSXMAG00000002089	arl13b	99	58.548	ENSNLEG00000001772	ARL13B	99	58.920	Nomascus_leucogenys
ENSXMAG00000002089	arl13b	99	59.859	ENSODEG00000011381	ARL13B	99	59.529	Octodon_degus
ENSXMAG00000002089	arl13b	99	79.254	ENSONIG00000001864	arl13b	99	78.555	Oreochromis_niloticus
ENSXMAG00000002089	arl13b	99	80.423	ENSORLG00000006350	arl13b	99	80.151	Oryzias_latipes
ENSXMAG00000002089	arl13b	99	80.159	ENSORLG00020013754	arl13b	99	80.952	Oryzias_latipes_hni
ENSXMAG00000002089	arl13b	99	80.423	ENSORLG00015012586	arl13b	99	79.648	Oryzias_latipes_hsok
ENSXMAG00000002089	arl13b	57	89.401	ENSOMEG00000010187	arl13b	84	89.401	Oryzias_melastigma
ENSXMAG00000002089	arl13b	99	59.314	ENSPSIG00000018115	ARL13B	99	59.705	Pelodiscus_sinensis
ENSXMAG00000002089	arl13b	99	81.530	ENSPMGG00000004584	arl13b	99	80.299	Periophthalmus_magnuspinnatus
ENSXMAG00000002089	arl13b	99	46.324	ENSPCIG00000026984	ARL13B	95	44.712	Phascolarctos_cinereus
ENSXMAG00000002089	arl13b	99	96.817	ENSPFOG00000005379	arl13b	99	96.222	Poecilia_formosa
ENSXMAG00000002089	arl13b	100	96.325	ENSPLAG00000008699	arl13b	100	96.325	Poecilia_latipinna
ENSXMAG00000002089	arl13b	96	95.300	ENSPMEG00000015387	arl13b	98	96.053	Poecilia_mexicana
ENSXMAG00000002089	arl13b	100	96.491	ENSPREG00000006291	arl13b	100	96.491	Poecilia_reticulata
ENSXMAG00000002089	arl13b	95	79.683	ENSPNYG00000022879	arl13b	97	79.630	Pundamilia_nyererei
ENSXMAG00000002089	arl13b	99	73.077	ENSPNAG00000003803	arl13b	99	73.048	Pygocentrus_nattereri
ENSXMAG00000002089	arl13b	59	82.222	ENSSFOG00015005491	arl13b	83	83.568	Scleropages_formosus
ENSXMAG00000002089	arl13b	56	70.833	ENSSFOG00015023057	arl13b	85	70.833	Scleropages_formosus
ENSXMAG00000002089	arl13b	99	74.693	ENSSMAG00000015450	arl13b	99	72.973	Scophthalmus_maximus
ENSXMAG00000002089	arl13b	100	81.841	ENSSDUG00000005560	arl13b	97	82.005	Seriola_dumerili
ENSXMAG00000002089	arl13b	100	82.097	ENSSLDG00000013361	arl13b	100	82.262	Seriola_lalandi_dorsalis
ENSXMAG00000002089	arl13b	99	58.392	ENSSARG00000003872	ARL13B	98	58.879	Sorex_araneus
ENSXMAG00000002089	arl13b	60	80.435	ENSSPUG00000006649	ARL13B	88	79.724	Sphenodon_punctatus
ENSXMAG00000002089	arl13b	100	82.474	ENSSPAG00000016442	arl13b	91	81.218	Stegastes_partitus
ENSXMAG00000002089	arl13b	99	59.048	ENSTGUG00000013493	ARL13B	98	55.000	Taeniopygia_guttata
ENSXMAG00000002089	arl13b	99	53.139	ENSTRUG00000013035	-	84	71.429	Takifugu_rubripes
ENSXMAG00000002089	arl13b	55	72.727	ENSTRUG00000003641	arl13b	74	71.429	Takifugu_rubripes
ENSXMAG00000002089	arl13b	99	56.132	ENSVVUG00000021511	ARL13B	99	55.660	Vulpes_vulpes
ENSXMAG00000002089	arl13b	55	41.315	ENSXETG00000026166	arl13a	50	41.784	Xenopus_tropicalis
ENSXMAG00000002089	arl13b	99	59.579	ENSXETG00000032383	ARL13B	98	74.908	Xenopus_tropicalis
ENSXMAG00000002089	arl13b	99	87.798	ENSXCOG00000016955	arl13b	99	87.657	Xiphophorus_couchianus