EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002090 (Gene tree)
Gene ID: 102224459
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11084 bases
Position: chr14:20684215-20695298
Accession: 102224459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002094	ARS2	PF04959.13	5.7e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002099	-	4886	XM_023346068	ENSXMAP00000002094	820 (aa)	XP_023201836	M3ZIQ2

Gene Model

Click here to download ENSXMAG00000002090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002090	-	54	61.987	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSXMAG00000002090	-	54	65.076	ENSAPOG00000002304	srrt	54	61.489	Acanthochromis_polyacanthus
ENSXMAG00000002090	-	89	62.174	ENSAMEG00000014506	SRRT	77	61.438	Ailuropoda_melanoleuca
ENSXMAG00000002090	-	94	56.226	ENSACIG00000015795	srrt	92	55.428	Amphilophus_citrinellus
ENSXMAG00000002090	-	94	56.637	ENSAOCG00000009693	srrt	92	55.270	Amphiprion_ocellaris
ENSXMAG00000002090	-	93	76.961	ENSAOCG00000009189	-	98	75.445	Amphiprion_ocellaris
ENSXMAG00000002090	-	94	57.269	ENSAPEG00000003646	srrt	92	55.527	Amphiprion_percula
ENSXMAG00000002090	-	93	76.961	ENSAPEG00000020016	-	98	75.445	Amphiprion_percula
ENSXMAG00000002090	-	60	80.350	ENSATEG00000003652	-	86	83.333	Anabas_testudineus
ENSXMAG00000002090	-	94	55.335	ENSATEG00000014425	srrt	81	63.261	Anabas_testudineus
ENSXMAG00000002090	-	54	61.304	ENSACAG00000001014	SRRT	93	52.217	Anolis_carolinensis
ENSXMAG00000002090	-	54	61.064	ENSANAG00000031718	SRRT	93	52.869	Aotus_nancymaae
ENSXMAG00000002090	-	93	76.572	ENSACLG00000009423	-	98	76.824	Astatotilapia_calliptera
ENSXMAG00000002090	-	54	63.853	ENSACLG00000013156	srrt	89	54.921	Astatotilapia_calliptera
ENSXMAG00000002090	-	53	63.516	ENSAMXG00000016671	srrt	50	62.281	Astyanax_mexicanus
ENSXMAG00000002090	-	54	61.277	ENSBTAG00000001134	SRRT	93	53.106	Bos_taurus
ENSXMAG00000002090	-	71	37.459	WBGene00017085	E01A2.2	85	38.333	Caenorhabditis_elegans
ENSXMAG00000002090	-	54	61.277	ENSCJAG00000014917	SRRT	93	52.991	Callithrix_jacchus
ENSXMAG00000002090	-	96	53.892	ENSCAFG00000023538	SRRT	93	52.862	Canis_familiaris
ENSXMAG00000002090	-	96	53.964	ENSCAFG00020013358	SRRT	97	52.099	Canis_lupus_dingo
ENSXMAG00000002090	-	54	61.242	ENSCHIG00000010495	SRRT	93	52.805	Capra_hircus
ENSXMAG00000002090	-	96	52.927	ENSTSYG00000036426	SRRT	96	52.605	Carlito_syrichta
ENSXMAG00000002090	-	54	62.609	ENSCAPG00000013586	SRRT	97	54.455	Cavia_aperea
ENSXMAG00000002090	-	54	61.359	ENSCPOG00000001739	SRRT	93	53.471	Cavia_porcellus
ENSXMAG00000002090	-	54	61.064	ENSCCAG00000015877	SRRT	93	52.869	Cebus_capucinus
ENSXMAG00000002090	-	54	61.242	ENSCATG00000036306	SRRT	94	52.295	Cercocebus_atys
ENSXMAG00000002090	-	96	53.974	ENSCLAG00000007568	SRRT	93	53.415	Chinchilla_lanigera
ENSXMAG00000002090	-	54	61.064	ENSCSAG00000017996	SRRT	93	52.927	Chlorocebus_sabaeus
ENSXMAG00000002090	-	53	61.314	ENSCHOG00000007815	SRRT	64	55.806	Choloepus_hoffmanni
ENSXMAG00000002090	-	71	57.674	ENSCPBG00000011553	SRRT	81	50.400	Chrysemys_picta_bellii
ENSXMAG00000002090	-	100	39.888	ENSCING00000003506	-	54	47.269	Ciona_intestinalis
ENSXMAG00000002090	-	100	38.895	ENSCSAVG00000008394	-	87	52.035	Ciona_savignyi
ENSXMAG00000002090	-	54	61.242	ENSCANG00000034556	SRRT	93	53.064	Colobus_angolensis_palliatus
ENSXMAG00000002090	-	54	61.277	ENSCGRG00001001594	Srrt	93	53.228	Cricetulus_griseus_chok1gshd
ENSXMAG00000002090	-	72	60.645	ENSCGRG00000007292	Srrt	89	56.568	Cricetulus_griseus_crigri
ENSXMAG00000002090	-	96	51.732	ENSCSEG00000017878	srrt	50	57.734	Cynoglossus_semilaevis
ENSXMAG00000002090	-	83	81.283	ENSCSEG00000005233	-	89	82.301	Cynoglossus_semilaevis
ENSXMAG00000002090	-	90	83.089	ENSCVAG00000017344	-	98	83.482	Cyprinodon_variegatus
ENSXMAG00000002090	-	94	56.760	ENSCVAG00000019848	srrt	92	55.654	Cyprinodon_variegatus
ENSXMAG00000002090	-	55	64.086	ENSDARG00000017762	srrt	92	52.732	Danio_rerio
ENSXMAG00000002090	-	54	61.064	ENSDNOG00000003851	SRRT	93	52.619	Dasypus_novemcinctus
ENSXMAG00000002090	-	96	54.384	ENSDORG00000005584	Srrt	89	57.602	Dipodomys_ordii
ENSXMAG00000002090	-	96	43.739	FBgn0033062	Ars2	67	49.892	Drosophila_melanogaster
ENSXMAG00000002090	-	77	58.577	ENSETEG00000016175	SRRT	69	57.085	Echinops_telfairi
ENSXMAG00000002090	-	77	50.693	ENSEBUG00000008517	-	65	59.081	Eptatretus_burgeri
ENSXMAG00000002090	-	96	53.529	ENSEASG00005016956	SRRT	93	52.984	Equus_asinus_asinus
ENSXMAG00000002090	-	96	53.529	ENSECAG00000012292	SRRT	93	52.984	Equus_caballus
ENSXMAG00000002090	-	78	64.103	ENSEEUG00000009117	SRRT	85	56.716	Erinaceus_europaeus
ENSXMAG00000002090	-	93	64.946	ENSELUG00000021216	-	93	65.259	Esox_lucius
ENSXMAG00000002090	-	96	53.693	ENSFCAG00000006855	SRRT	93	52.984	Felis_catus
ENSXMAG00000002090	-	54	59.607	ENSFDAG00000021347	SRRT	92	52.664	Fukomys_damarensis
ENSXMAG00000002090	-	55	78.344	ENSFHEG00000004105	-	94	77.489	Fundulus_heteroclitus
ENSXMAG00000002090	-	75	65.356	ENSFHEG00000002756	srrt	82	64.039	Fundulus_heteroclitus
ENSXMAG00000002090	-	95	53.066	ENSGMOG00000018619	srrt	92	51.699	Gadus_morhua
ENSXMAG00000002090	-	54	65.652	ENSGAFG00000005423	srrt	93	54.513	Gambusia_affinis
ENSXMAG00000002090	-	100	96.833	ENSGAFG00000020383	-	100	96.833	Gambusia_affinis
ENSXMAG00000002090	-	94	54.697	ENSGACG00000020387	srrt	51	63.499	Gasterosteus_aculeatus
ENSXMAG00000002090	-	93	69.927	ENSGACG00000001100	-	93	70.690	Gasterosteus_aculeatus
ENSXMAG00000002090	-	54	61.242	ENSGGOG00000001508	SRRT	93	53.186	Gorilla_gorilla
ENSXMAG00000002090	-	54	63.715	ENSHBUG00000002942	srrt	89	54.501	Haplochromis_burtoni
ENSXMAG00000002090	-	96	53.738	ENSHGLG00000008344	Srrt	93	53.228	Heterocephalus_glaber_female
ENSXMAG00000002090	-	96	54.235	ENSHGLG00100018857	Srrt	93	53.620	Heterocephalus_glaber_male
ENSXMAG00000002090	-	93	70.942	ENSHCOG00000008904	-	97	72.000	Hippocampus_comes
ENSXMAG00000002090	-	98	56.659	ENSHCOG00000005403	srrt	92	55.457	Hippocampus_comes
ENSXMAG00000002090	-	55	62.716	ENSIPUG00000021150	srrt	51	63.319	Ictalurus_punctatus
ENSXMAG00000002090	-	54	61.242	ENSSTOG00000013776	SRRT	93	52.999	Ictidomys_tridecemlineatus
ENSXMAG00000002090	-	96	55.078	ENSJJAG00000010446	Srrt	89	57.511	Jaculus_jaculus
ENSXMAG00000002090	-	94	56.527	ENSKMAG00000013599	srrt	92	55.939	Kryptolebias_marmoratus
ENSXMAG00000002090	-	93	76.449	ENSKMAG00000008468	-	98	76.588	Kryptolebias_marmoratus
ENSXMAG00000002090	-	96	56.574	ENSLBEG00000016308	srrt	92	54.887	Labrus_bergylta
ENSXMAG00000002090	-	64	67.554	ENSLBEG00000028983	-	99	64.882	Labrus_bergylta
ENSXMAG00000002090	-	94	48.134	ENSLACG00000001089	SRRT	92	46.442	Latimeria_chalumnae
ENSXMAG00000002090	-	54	55.654	ENSLOCG00000013658	srrt	82	55.111	Lepisosteus_oculatus
ENSXMAG00000002090	-	54	61.064	ENSLAFG00000007725	SRRT	93	53.358	Loxodonta_africana
ENSXMAG00000002090	-	54	61.242	ENSMFAG00000033745	SRRT	97	52.295	Macaca_fascicularis
ENSXMAG00000002090	-	54	61.064	ENSMMUG00000021255	SRRT	93	52.927	Macaca_mulatta
ENSXMAG00000002090	-	54	61.064	ENSMNEG00000041864	SRRT	94	52.295	Macaca_nemestrina
ENSXMAG00000002090	-	54	61.242	ENSMLEG00000029479	SRRT	95	52.295	Mandrillus_leucophaeus
ENSXMAG00000002090	-	54	63.399	ENSMAMG00000014311	srrt	52	63.537	Mastacembelus_armatus
ENSXMAG00000002090	-	93	77.239	ENSMAMG00000010681	-	98	77.289	Mastacembelus_armatus
ENSXMAG00000002090	-	54	63.853	ENSMZEG00005016135	srrt	89	54.921	Maylandia_zebra
ENSXMAG00000002090	-	93	76.695	ENSMZEG00005028002	-	98	76.941	Maylandia_zebra
ENSXMAG00000002090	-	54	61.277	ENSMAUG00000011386	Srrt	93	53.236	Mesocricetus_auratus
ENSXMAG00000002090	-	54	61.277	ENSMICG00000009471	SRRT	95	52.473	Microcebus_murinus
ENSXMAG00000002090	-	96	54.782	ENSMOCG00000001971	Srrt	93	53.528	Microtus_ochrogaster
ENSXMAG00000002090	-	95	57.160	ENSMMOG00000016399	srrt	92	54.855	Mola_mola
ENSXMAG00000002090	-	83	72.438	ENSMMOG00000011137	-	88	72.299	Mola_mola
ENSXMAG00000002090	-	54	58.737	ENSMODG00000004862	SRRT	89	59.414	Monodelphis_domestica
ENSXMAG00000002090	-	70	55.537	ENSMALG00000005567	-	100	54.195	Monopterus_albus
ENSXMAG00000002090	-	96	55.370	MGP_CAROLIEiJ_G0027870	Srrt	94	58.301	Mus_caroli
ENSXMAG00000002090	-	96	55.370	ENSMUSG00000037364	Srrt	94	58.301	Mus_musculus
ENSXMAG00000002090	-	54	62.174	MGP_PahariEiJ_G0024456	Srrt	94	58.301	Mus_pahari
ENSXMAG00000002090	-	96	55.370	MGP_SPRETEiJ_G0028875	Srrt	94	58.301	Mus_spretus
ENSXMAG00000002090	-	96	53.828	ENSMPUG00000015839	SRRT	93	52.984	Mustela_putorius_furo
ENSXMAG00000002090	-	54	61.064	ENSMLUG00000009975	SRRT	93	53.171	Myotis_lucifugus
ENSXMAG00000002090	-	54	61.064	ENSNGAG00000023715	Srrt	100	54.223	Nannospalax_galili
ENSXMAG00000002090	-	54	63.124	ENSNBRG00000019100	srrt	92	52.805	Neolamprologus_brichardi
ENSXMAG00000002090	-	95	51.460	ENSNLEG00000011987	SRRT	97	50.820	Nomascus_leucogenys
ENSXMAG00000002090	-	94	46.618	ENSMEUG00000011941	SRRT	92	44.861	Notamacropus_eugenii
ENSXMAG00000002090	-	64	59.398	ENSOPRG00000002502	-	67	59.091	Ochotona_princeps
ENSXMAG00000002090	-	54	62.391	ENSODEG00000016856	SRRT	92	54.332	Octodon_degus
ENSXMAG00000002090	-	93	76.630	ENSONIG00000016080	-	93	75.523	Oreochromis_niloticus
ENSXMAG00000002090	-	54	63.853	ENSONIG00000004242	srrt	93	51.127	Oreochromis_niloticus
ENSXMAG00000002090	-	96	54.824	ENSORLG00000008120	srrt	52	63.913	Oryzias_latipes
ENSXMAG00000002090	-	96	55.437	ENSORLG00020003058	srrt	52	63.696	Oryzias_latipes_hni
ENSXMAG00000002090	-	96	55.674	ENSORLG00015008062	srrt	52	63.913	Oryzias_latipes_hsok
ENSXMAG00000002090	-	98	76.867	ENSOMEG00000006963	-	98	77.601	Oryzias_melastigma
ENSXMAG00000002090	-	96	56.489	ENSOMEG00000003155	srrt	92	55.499	Oryzias_melastigma
ENSXMAG00000002090	-	54	61.277	ENSOGAG00000017242	SRRT	93	53.228	Otolemur_garnettii
ENSXMAG00000002090	-	54	61.242	ENSOARG00000015645	SRRT	93	52.941	Ovis_aries
ENSXMAG00000002090	-	54	61.242	ENSPPAG00000041090	SRRT	93	53.129	Pan_paniscus
ENSXMAG00000002090	-	96	53.765	ENSPPRG00000009557	SRRT	93	53.186	Panthera_pardus
ENSXMAG00000002090	-	96	53.693	ENSPTIG00000014355	SRRT	93	52.862	Panthera_tigris_altaica
ENSXMAG00000002090	-	54	61.242	ENSPTRG00000019511	SRRT	98	51.270	Pan_troglodytes
ENSXMAG00000002090	-	54	59.833	ENSPANG00000020763	SRRT	94	52.295	Papio_anubis
ENSXMAG00000002090	-	96	56.130	ENSPKIG00000005434	srrt	92	54.557	Paramormyrops_kingsleyae
ENSXMAG00000002090	-	94	55.340	ENSPKIG00000022212	-	93	55.351	Paramormyrops_kingsleyae
ENSXMAG00000002090	-	55	59.743	ENSPSIG00000016311	SRRT	93	51.792	Pelodiscus_sinensis
ENSXMAG00000002090	-	96	56.585	ENSPMGG00000002841	srrt	92	55.934	Periophthalmus_magnuspinnatus
ENSXMAG00000002090	-	54	62.174	ENSPEMG00000010834	Srrt	92	55.394	Peromyscus_maniculatus_bairdii
ENSXMAG00000002090	-	96	50.237	ENSPMAG00000009614	-	55	58.017	Petromyzon_marinus
ENSXMAG00000002090	-	54	60.722	ENSPCIG00000000816	SRRT	93	52.347	Phascolarctos_cinereus
ENSXMAG00000002090	-	100	96.715	ENSPFOG00000016554	-	100	96.715	Poecilia_formosa
ENSXMAG00000002090	-	54	65.870	ENSPFOG00000005704	srrt	93	52.555	Poecilia_formosa
ENSXMAG00000002090	-	100	96.112	ENSPLAG00000004526	-	100	96.112	Poecilia_latipinna
ENSXMAG00000002090	-	97	96.370	ENSPMEG00000001520	-	100	96.370	Poecilia_mexicana
ENSXMAG00000002090	-	79	65.011	ENSPMEG00000001182	srrt	82	63.636	Poecilia_mexicana
ENSXMAG00000002090	-	94	56.750	ENSPREG00000022308	srrt	93	52.433	Poecilia_reticulata
ENSXMAG00000002090	-	54	58.577	ENSPCAG00000001621	SRRT	93	50.242	Procavia_capensis
ENSXMAG00000002090	-	54	61.456	ENSPCOG00000025751	SRRT	93	53.106	Propithecus_coquereli
ENSXMAG00000002090	-	63	58.333	ENSPVAG00000000834	SRRT	100	45.706	Pteropus_vampyrus
ENSXMAG00000002090	-	54	63.853	ENSPNYG00000018710	srrt	93	54.501	Pundamilia_nyererei
ENSXMAG00000002090	-	65	64.286	ENSPNAG00000010629	srrt	65	57.037	Pygocentrus_nattereri
ENSXMAG00000002090	-	54	51.828	ENSRNOG00000048277	AABR07035787.1	92	50.968	Rattus_norvegicus
ENSXMAG00000002090	-	54	61.064	ENSRBIG00000035718	SRRT	94	52.295	Rhinopithecus_bieti
ENSXMAG00000002090	-	54	61.064	ENSRROG00000030622	SRRT	95	52.295	Rhinopithecus_roxellana
ENSXMAG00000002090	-	54	61.242	ENSSBOG00000033570	SRRT	94	53.006	Saimiri_boliviensis_boliviensis
ENSXMAG00000002090	-	71	49.691	ENSSHAG00000007349	-	74	60.254	Sarcophilus_harrisii
ENSXMAG00000002090	-	54	66.013	ENSSFOG00015017293	srrt	51	65.502	Scleropages_formosus
ENSXMAG00000002090	-	94	56.981	ENSSMAG00000015342	srrt	92	55.203	Scophthalmus_maximus
ENSXMAG00000002090	-	81	70.845	ENSSMAG00000018195	-	97	69.697	Scophthalmus_maximus
ENSXMAG00000002090	-	55	65.890	ENSSDUG00000002051	-	94	64.871	Seriola_dumerili
ENSXMAG00000002090	-	54	64.425	ENSSDUG00000012049	srrt	92	54.490	Seriola_dumerili
ENSXMAG00000002090	-	80	64.912	ENSSLDG00000017477	srrt	78	63.956	Seriola_lalandi_dorsalis
ENSXMAG00000002090	-	85	75.000	ENSSPAG00000018943	-	97	74.210	Stegastes_partitus
ENSXMAG00000002090	-	51	61.678	ENSSSCG00000024789	SRRT	98	52.104	Sus_scrofa
ENSXMAG00000002090	-	90	72.606	ENSTRUG00000000023	-	96	74.023	Takifugu_rubripes
ENSXMAG00000002090	-	54	62.393	ENSTRUG00000016075	srrt	93	52.828	Takifugu_rubripes
ENSXMAG00000002090	-	93	68.812	ENSTNIG00000003111	-	93	68.093	Tetraodon_nigroviridis
ENSXMAG00000002090	-	73	53.528	ENSTNIG00000011779	srrt	100	52.761	Tetraodon_nigroviridis
ENSXMAG00000002090	-	54	61.064	ENSTTRG00000011104	SRRT	93	53.049	Tursiops_truncatus
ENSXMAG00000002090	-	94	53.253	ENSUAMG00000027997	SRRT	95	52.862	Ursus_americanus
ENSXMAG00000002090	-	96	53.420	ENSUMAG00000011295	SRRT	93	52.862	Ursus_maritimus
ENSXMAG00000002090	-	96	53.892	ENSVVUG00000023572	SRRT	93	52.862	Vulpes_vulpes
ENSXMAG00000002090	-	96	47.462	ENSXETG00000025124	srrt	72	57.940	Xenopus_tropicalis
ENSXMAG00000002090	-	55	81.938	ENSXCOG00000013105	-	91	80.942	Xiphophorus_couchianus
ENSXMAG00000002090	-	96	57.565	ENSXMAG00000007627	srrt	92	55.598	Xiphophorus_maculatus