EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000002135 (Gene tree)
Gene ID
102231192
Gene Symbol
-
Alias
-
Full Name
zinc finger matrin-type protein 1-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
7209 bases
Position
chr20:29624094-29631302
Accession
102231192
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000024761zf-metPF12874.76.8e-1814
ENSXMAP00000024761zf-metPF12874.76.8e-1824
ENSXMAP00000024761zf-metPF12874.76.8e-1834
ENSXMAP00000024761zf-metPF12874.76.8e-1844
ENSXMAP00000002131zf-metPF12874.78.7e-1814
ENSXMAP00000002131zf-metPF12874.78.7e-1824
ENSXMAP00000002131zf-metPF12874.78.7e-1834
ENSXMAP00000002131zf-metPF12874.78.7e-1844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000002136-3674XM_023353475ENSXMAP00000002131580 (aa)XP_023209243M3ZIT9
ENSXMAT00000042532-3599XM_023353476ENSXMAP00000024761555 (aa)XP_023209244-
Gene Model
Click here to download ENSXMAG00000002135's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002135's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000002135-10042.308ENSACIG00000003672-9945.951Amphilophus_citrinellus
ENSXMAG00000002135-5254.662ENSAPEG00000002169-9750.395Amphiprion_percula
ENSXMAG00000002135-9954.202ENSFHEG00000022774-7356.849Fundulus_heteroclitus
ENSXMAG00000002135-8087.151ENSGAFG00000021491-8387.571Gambusia_affinis
ENSXMAG00000002135-7152.048ENSKMAG00000018937-9448.680Kryptolebias_marmoratus
ENSXMAG00000002135-5934.605ENSLACG00000004486-5636.478Latimeria_chalumnae
ENSXMAG00000002135-7052.871ENSMAMG00000018920-9947.732Mastacembelus_armatus
ENSXMAG00000002135-9743.478ENSNBRG00000018883-9946.787Neolamprologus_brichardi
ENSXMAG00000002135-5949.333ENSONIG00000020374-9844.646Oreochromis_niloticus
ENSXMAG00000002135-7250.118ENSORLG00000026368-10046.564Oryzias_latipes
ENSXMAG00000002135-7250.000ENSORLG00020000211-10045.941Oryzias_latipes_hni
ENSXMAG00000002135-7250.000ENSORLG00015004724-10046.472Oryzias_latipes_hsok
ENSXMAG00000002135-10047.199ENSOMEG00000002792-10048.705Oryzias_melastigma
ENSXMAG00000002135-6245.692ENSPKIG00000016531-9939.610Paramormyrops_kingsleyae
ENSXMAG00000002135-10087.207ENSPFOG00000010723-9586.847Poecilia_formosa
ENSXMAG00000002135-10087.207ENSPLAG00000012038-10086.847Poecilia_latipinna
ENSXMAG00000002135-10087.608ENSPMEG00000020927-10086.919Poecilia_mexicana
ENSXMAG00000002135-8886.078ENSPREG00000020523-10085.294Poecilia_reticulata
ENSXMAG00000002135-6853.082ENSPNYG00000003309-9944.154Pundamilia_nyererei
ENSXMAG00000002135-6949.140ENSSLDG00000017802-10046.399Seriola_lalandi_dorsalis

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