EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002353 (Gene tree)
Gene ID: 102235698
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6539 bases
Position: chr6:18377784-18384322
Accession: 102235698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002366	efThoc1	PF11957.8	1.1e-143	1	1
ENSXMAP00000026054	efThoc1	PF11957.8	4e-133	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000033893	-	1926	-	ENSXMAP00000026054	641 (aa)	-	-
ENSXMAT00000002371	-	1965	XM_014474841	ENSXMAP00000002366	654 (aa)	XP_014330327	M3ZJH4

Gene Model

Click here to download ENSXMAG00000002353's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002353	thoc1	99	71.933	ENSG00000079134	THOC1	99	79.044	Homo_sapiens
ENSXMAG00000002353	thoc1	99	72.239	ENSAMEG00000006645	THOC1	98	72.239	Ailuropoda_melanoleuca
ENSXMAG00000002353	thoc1	98	85.110	ENSACIG00000019392	thoc1	95	88.925	Amphilophus_citrinellus
ENSXMAG00000002353	thoc1	100	86.697	ENSAOCG00000008391	thoc1	100	86.697	Amphiprion_ocellaris
ENSXMAG00000002353	thoc1	100	91.896	ENSAPEG00000001093	thoc1	100	91.896	Amphiprion_percula
ENSXMAG00000002353	thoc1	100	90.061	ENSATEG00000004783	thoc1	100	90.061	Anabas_testudineus
ENSXMAG00000002353	thoc1	99	71.516	ENSAPLG00000016149	THOC1	98	71.516	Anas_platyrhynchos
ENSXMAG00000002353	thoc1	99	71.254	ENSACAG00000008307	THOC1	96	70.642	Anolis_carolinensis
ENSXMAG00000002353	thoc1	99	71.320	ENSANAG00000033200	THOC1	98	71.320	Aotus_nancymaae
ENSXMAG00000002353	thoc1	100	90.061	ENSACLG00000016836	thoc1	100	90.061	Astatotilapia_calliptera
ENSXMAG00000002353	thoc1	94	75.318	ENSAMXG00000014708	thoc1	98	74.641	Astyanax_mexicanus
ENSXMAG00000002353	thoc1	99	72.239	ENSBTAG00000019215	THOC1	98	72.239	Bos_taurus
ENSXMAG00000002353	thoc1	71	34.836	WBGene00020172	thoc-1	73	34.827	Caenorhabditis_elegans
ENSXMAG00000002353	thoc1	99	72.086	ENSCJAG00000020450	THOC1	98	72.086	Callithrix_jacchus
ENSXMAG00000002353	thoc1	99	72.239	ENSCAFG00000018324	THOC1	98	72.239	Canis_familiaris
ENSXMAG00000002353	thoc1	99	72.239	ENSCAFG00020017894	THOC1	98	72.239	Canis_lupus_dingo
ENSXMAG00000002353	thoc1	99	72.239	ENSCHIG00000015399	THOC1	98	73.270	Capra_hircus
ENSXMAG00000002353	thoc1	99	71.933	ENSTSYG00000010585	THOC1	98	71.933	Carlito_syrichta
ENSXMAG00000002353	thoc1	97	54.660	ENSCAPG00000016270	THOC1	97	54.976	Cavia_aperea
ENSXMAG00000002353	thoc1	99	71.319	ENSCPOG00000000959	THOC1	98	71.319	Cavia_porcellus
ENSXMAG00000002353	thoc1	99	72.086	ENSCCAG00000025766	THOC1	98	72.086	Cebus_capucinus
ENSXMAG00000002353	thoc1	99	69.785	ENSCATG00000028180	THOC1	96	76.012	Cercocebus_atys
ENSXMAG00000002353	thoc1	97	73.113	ENSCLAG00000009117	THOC1	99	73.113	Chinchilla_lanigera
ENSXMAG00000002353	thoc1	99	72.086	ENSCSAG00000017631	THOC1	98	72.086	Chlorocebus_sabaeus
ENSXMAG00000002353	thoc1	79	75.519	ENSCHOG00000010609	THOC1	78	75.519	Choloepus_hoffmanni
ENSXMAG00000002353	thoc1	99	72.588	ENSCPBG00000027558	THOC1	99	72.588	Chrysemys_picta_bellii
ENSXMAG00000002353	thoc1	74	46.667	ENSCING00000007663	-	99	46.680	Ciona_intestinalis
ENSXMAG00000002353	thoc1	94	47.943	ENSCSAVG00000010649	-	100	47.943	Ciona_savignyi
ENSXMAG00000002353	thoc1	99	71.933	ENSCANG00000034265	THOC1	96	76.385	Colobus_angolensis_palliatus
ENSXMAG00000002353	thoc1	99	71.166	ENSCGRG00001016464	Thoc1	98	71.166	Cricetulus_griseus_chok1gshd
ENSXMAG00000002353	thoc1	99	71.362	ENSCGRG00000010269	-	99	72.327	Cricetulus_griseus_crigri
ENSXMAG00000002353	thoc1	90	60.034	ENSCGRG00000003390	-	97	60.034	Cricetulus_griseus_crigri
ENSXMAG00000002353	thoc1	99	86.474	ENSCSEG00000012486	thoc1	99	87.621	Cynoglossus_semilaevis
ENSXMAG00000002353	thoc1	100	92.813	ENSCVAG00000020600	thoc1	100	92.813	Cyprinodon_variegatus
ENSXMAG00000002353	thoc1	100	81.679	ENSDARG00000088246	thoc1	100	81.679	Danio_rerio
ENSXMAG00000002353	thoc1	99	72.043	ENSDNOG00000019217	THOC1	98	72.043	Dasypus_novemcinctus
ENSXMAG00000002353	thoc1	97	68.239	ENSDORG00000008060	Thoc1	98	68.239	Dipodomys_ordii
ENSXMAG00000002353	thoc1	98	37.393	FBgn0037382	Hpr1	74	42.364	Drosophila_melanogaster
ENSXMAG00000002353	thoc1	90	55.102	ENSETEG00000004165	THOC1	98	55.102	Echinops_telfairi
ENSXMAG00000002353	thoc1	92	63.289	ENSEBUG00000005998	thoc1	97	64.060	Eptatretus_burgeri
ENSXMAG00000002353	thoc1	99	71.933	ENSEASG00005002549	THOC1	94	71.319	Equus_asinus_asinus
ENSXMAG00000002353	thoc1	99	72.086	ENSECAG00000009267	THOC1	88	72.086	Equus_caballus
ENSXMAG00000002353	thoc1	79	58.865	ENSEEUG00000012214	-	81	58.865	Erinaceus_europaeus
ENSXMAG00000002353	thoc1	100	83.866	ENSELUG00000023277	thoc1	100	83.866	Esox_lucius
ENSXMAG00000002353	thoc1	99	72.546	ENSFCAG00000022454	THOC1	85	72.546	Felis_catus
ENSXMAG00000002353	thoc1	97	72.387	ENSFALG00000006205	THOC1	99	72.387	Ficedula_albicollis
ENSXMAG00000002353	thoc1	98	72.205	ENSFDAG00000006842	THOC1	99	72.205	Fukomys_damarensis
ENSXMAG00000002353	thoc1	100	92.966	ENSFHEG00000008841	thoc1	100	92.966	Fundulus_heteroclitus
ENSXMAG00000002353	thoc1	99	86.043	ENSGMOG00000011486	thoc1	99	86.043	Gadus_morhua
ENSXMAG00000002353	thoc1	99	71.822	ENSGALG00000014915	THOC1	99	70.953	Gallus_gallus
ENSXMAG00000002353	thoc1	100	98.471	ENSGAFG00000021464	thoc1	100	98.471	Gambusia_affinis
ENSXMAG00000002353	thoc1	100	88.991	ENSGACG00000017361	thoc1	100	88.991	Gasterosteus_aculeatus
ENSXMAG00000002353	thoc1	99	73.201	ENSGAGG00000021230	-	97	73.201	Gopherus_agassizii
ENSXMAG00000002353	thoc1	99	72.086	ENSGGOG00000003013	THOC1	98	72.086	Gorilla_gorilla
ENSXMAG00000002353	thoc1	100	90.367	ENSHBUG00000009096	thoc1	100	90.367	Haplochromis_burtoni
ENSXMAG00000002353	thoc1	78	59.259	ENSHGLG00000009264	-	96	67.614	Heterocephalus_glaber_female
ENSXMAG00000002353	thoc1	99	71.933	ENSHGLG00000003712	-	98	71.933	Heterocephalus_glaber_female
ENSXMAG00000002353	thoc1	99	71.779	ENSHGLG00100003570	THOC1	98	71.779	Heterocephalus_glaber_male
ENSXMAG00000002353	thoc1	77	58.201	ENSHGLG00100002225	-	98	58.201	Heterocephalus_glaber_male
ENSXMAG00000002353	thoc1	91	80.566	ENSIPUG00000005306	thoc1	100	79.434	Ictalurus_punctatus
ENSXMAG00000002353	thoc1	99	72.086	ENSSTOG00000006484	THOC1	98	72.086	Ictidomys_tridecemlineatus
ENSXMAG00000002353	thoc1	54	72.414	ENSJJAG00000014893	-	97	72.414	Jaculus_jaculus
ENSXMAG00000002353	thoc1	100	90.826	ENSKMAG00000003904	thoc1	100	90.826	Kryptolebias_marmoratus
ENSXMAG00000002353	thoc1	100	90.520	ENSLBEG00000020372	thoc1	98	90.520	Labrus_bergylta
ENSXMAG00000002353	thoc1	99	73.354	ENSLACG00000014869	THOC1	99	73.047	Latimeria_chalumnae
ENSXMAG00000002353	thoc1	100	80.822	ENSLOCG00000002097	thoc1	99	80.518	Lepisosteus_oculatus
ENSXMAG00000002353	thoc1	99	72.086	ENSLAFG00000009585	THOC1	98	72.086	Loxodonta_africana
ENSXMAG00000002353	thoc1	99	72.086	ENSMFAG00000041520	THOC1	98	72.086	Macaca_fascicularis
ENSXMAG00000002353	thoc1	99	72.086	ENSMMUG00000004662	THOC1	98	72.086	Macaca_mulatta
ENSXMAG00000002353	thoc1	99	72.086	ENSMNEG00000040177	THOC1	98	72.086	Macaca_nemestrina
ENSXMAG00000002353	thoc1	99	72.086	ENSMLEG00000034201	THOC1	98	72.086	Mandrillus_leucophaeus
ENSXMAG00000002353	thoc1	96	87.879	ENSMAMG00000016747	thoc1	100	87.879	Mastacembelus_armatus
ENSXMAG00000002353	thoc1	100	90.061	ENSMZEG00005024609	thoc1	100	90.061	Maylandia_zebra
ENSXMAG00000002353	thoc1	97	72.144	ENSMGAG00000009811	THOC1	99	72.144	Meleagris_gallopavo
ENSXMAG00000002353	thoc1	99	70.706	ENSMAUG00000010272	Thoc1	98	70.706	Mesocricetus_auratus
ENSXMAG00000002353	thoc1	99	72.239	ENSMICG00000027200	THOC1	98	72.239	Microcebus_murinus
ENSXMAG00000002353	thoc1	99	62.043	ENSMOCG00000014924	-	96	61.433	Microtus_ochrogaster
ENSXMAG00000002353	thoc1	99	70.245	ENSMOCG00000014536	-	85	70.245	Microtus_ochrogaster
ENSXMAG00000002353	thoc1	93	90.033	ENSMMOG00000011772	thoc1	100	90.033	Mola_mola
ENSXMAG00000002353	thoc1	99	71.125	ENSMODG00000021482	THOC1	98	71.125	Monodelphis_domestica
ENSXMAG00000002353	thoc1	100	89.144	ENSMALG00000021872	thoc1	100	89.144	Monopterus_albus
ENSXMAG00000002353	thoc1	99	70.706	MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	Mus_caroli
ENSXMAG00000002353	thoc1	99	70.859	ENSMUSG00000024287	Thoc1	98	78.873	Mus_musculus
ENSXMAG00000002353	thoc1	99	70.859	MGP_PahariEiJ_G0018726	Thoc1	98	70.859	Mus_pahari
ENSXMAG00000002353	thoc1	99	70.859	MGP_SPRETEiJ_G0022905	Thoc1	98	70.859	Mus_spretus
ENSXMAG00000002353	thoc1	99	72.239	ENSMPUG00000005448	THOC1	98	72.239	Mustela_putorius_furo
ENSXMAG00000002353	thoc1	61	65.414	ENSMLUG00000024912	-	100	65.414	Myotis_lucifugus
ENSXMAG00000002353	thoc1	99	71.012	ENSMLUG00000004090	-	98	71.012	Myotis_lucifugus
ENSXMAG00000002353	thoc1	90	66.275	ENSMLUG00000027965	-	99	66.611	Myotis_lucifugus
ENSXMAG00000002353	thoc1	99	71.472	ENSNGAG00000001401	-	98	71.472	Nannospalax_galili
ENSXMAG00000002353	thoc1	97	57.457	ENSNGAG00000008061	-	97	57.457	Nannospalax_galili
ENSXMAG00000002353	thoc1	98	88.088	ENSNBRG00000005991	thoc1	97	88.088	Neolamprologus_brichardi
ENSXMAG00000002353	thoc1	99	72.086	ENSNLEG00000006835	THOC1	98	72.086	Nomascus_leucogenys
ENSXMAG00000002353	thoc1	89	75.803	ENSMEUG00000009756	THOC1	91	73.448	Notamacropus_eugenii
ENSXMAG00000002353	thoc1	99	57.515	ENSOPRG00000001108	THOC1	98	57.515	Ochotona_princeps
ENSXMAG00000002353	thoc1	99	66.871	ENSODEG00000006623	THOC1	98	66.871	Octodon_degus
ENSXMAG00000002353	thoc1	100	90.214	ENSONIG00000009440	thoc1	98	90.169	Oreochromis_niloticus
ENSXMAG00000002353	thoc1	99	72.239	ENSOCUG00000011601	THOC1	98	72.239	Oryctolagus_cuniculus
ENSXMAG00000002353	thoc1	100	89.908	ENSORLG00000017629	thoc1	100	89.908	Oryzias_latipes
ENSXMAG00000002353	thoc1	100	90.061	ENSORLG00020007567	thoc1	100	90.061	Oryzias_latipes_hni
ENSXMAG00000002353	thoc1	100	89.908	ENSORLG00015007356	thoc1	100	89.908	Oryzias_latipes_hsok
ENSXMAG00000002353	thoc1	100	88.685	ENSOMEG00000008200	thoc1	100	88.532	Oryzias_melastigma
ENSXMAG00000002353	thoc1	99	69.018	ENSOGAG00000000470	THOC1	98	69.018	Otolemur_garnettii
ENSXMAG00000002353	thoc1	98	73.083	ENSOARG00000009238	THOC1	96	73.083	Ovis_aries
ENSXMAG00000002353	thoc1	99	72.086	ENSPPAG00000031812	THOC1	98	72.086	Pan_paniscus
ENSXMAG00000002353	thoc1	99	71.933	ENSPPRG00000023794	THOC1	97	76.000	Panthera_pardus
ENSXMAG00000002353	thoc1	99	71.933	ENSPTIG00000007469	THOC1	97	76.000	Panthera_tigris_altaica
ENSXMAG00000002353	thoc1	99	71.168	ENSPTRG00000009816	THOC1	98	71.168	Pan_troglodytes
ENSXMAG00000002353	thoc1	99	71.189	ENSPANG00000008665	THOC1	98	71.189	Papio_anubis
ENSXMAG00000002353	thoc1	100	81.679	ENSPKIG00000005906	thoc1	100	82.443	Paramormyrops_kingsleyae
ENSXMAG00000002353	thoc1	81	75.568	ENSPSIG00000007691	THOC1	97	75.568	Pelodiscus_sinensis
ENSXMAG00000002353	thoc1	94	84.117	ENSPMGG00000008279	thoc1	95	84.117	Periophthalmus_magnuspinnatus
ENSXMAG00000002353	thoc1	99	70.706	ENSPEMG00000021789	Thoc1	98	70.706	Peromyscus_maniculatus_bairdii
ENSXMAG00000002353	thoc1	74	72.041	ENSPCIG00000026942	THOC1	97	72.041	Phascolarctos_cinereus
ENSXMAG00000002353	thoc1	100	97.859	ENSPFOG00000011673	thoc1	100	97.859	Poecilia_formosa
ENSXMAG00000002353	thoc1	100	98.012	ENSPLAG00000019648	thoc1	100	98.012	Poecilia_latipinna
ENSXMAG00000002353	thoc1	100	98.012	ENSPMEG00000007083	thoc1	100	98.012	Poecilia_mexicana
ENSXMAG00000002353	thoc1	100	98.318	ENSPREG00000006719	thoc1	100	98.318	Poecilia_reticulata
ENSXMAG00000002353	thoc1	74	75.514	ENSPPYG00000009049	-	98	75.514	Pongo_abelii
ENSXMAG00000002353	thoc1	91	73.706	ENSPCAG00000005320	THOC1	91	73.706	Procavia_capensis
ENSXMAG00000002353	thoc1	99	71.472	ENSPCOG00000009234	THOC1	98	71.472	Propithecus_coquereli
ENSXMAG00000002353	thoc1	99	70.399	ENSPVAG00000004007	THOC1	98	70.399	Pteropus_vampyrus
ENSXMAG00000002353	thoc1	100	90.367	ENSPNYG00000019152	thoc1	100	90.367	Pundamilia_nyererei
ENSXMAG00000002353	thoc1	100	81.651	ENSPNAG00000023390	thoc1	99	81.470	Pygocentrus_nattereri
ENSXMAG00000002353	thoc1	90	50.862	ENSRNOG00000015332	Thoc1	94	58.065	Rattus_norvegicus
ENSXMAG00000002353	thoc1	99	71.320	ENSRBIG00000033738	THOC1	99	73.830	Rhinopithecus_bieti
ENSXMAG00000002353	thoc1	99	72.086	ENSRROG00000044988	THOC1	96	76.385	Rhinopithecus_roxellana
ENSXMAG00000002353	thoc1	99	71.779	ENSSBOG00000016556	THOC1	98	71.779	Saimiri_boliviensis_boliviensis
ENSXMAG00000002353	thoc1	99	71.933	ENSSHAG00000014829	THOC1	98	71.933	Sarcophilus_harrisii
ENSXMAG00000002353	thoc1	100	84.557	ENSSFOG00015021527	thoc1	100	84.557	Scleropages_formosus
ENSXMAG00000002353	thoc1	100	87.309	ENSSMAG00000018465	thoc1	99	87.309	Scophthalmus_maximus
ENSXMAG00000002353	thoc1	100	90.367	ENSSDUG00000016810	thoc1	100	90.367	Seriola_dumerili
ENSXMAG00000002353	thoc1	100	90.367	ENSSLDG00000015555	thoc1	100	90.367	Seriola_lalandi_dorsalis
ENSXMAG00000002353	thoc1	85	73.663	ENSSARG00000006910	THOC1	84	73.663	Sorex_araneus
ENSXMAG00000002353	thoc1	98	70.918	ENSSPUG00000007238	THOC1	98	70.615	Sphenodon_punctatus
ENSXMAG00000002353	thoc1	100	86.433	ENSSPAG00000018847	thoc1	99	86.433	Stegastes_partitus
ENSXMAG00000002353	thoc1	99	72.239	ENSSSCG00000025653	THOC1	93	72.239	Sus_scrofa
ENSXMAG00000002353	thoc1	99	71.975	ENSTGUG00000010204	THOC1	99	71.975	Taeniopygia_guttata
ENSXMAG00000002353	thoc1	100	88.379	ENSTRUG00000013518	thoc1	100	88.379	Takifugu_rubripes
ENSXMAG00000002353	thoc1	100	87.462	ENSTNIG00000008473	thoc1	99	87.462	Tetraodon_nigroviridis
ENSXMAG00000002353	thoc1	99	65.031	ENSTBEG00000016920	THOC1	98	65.031	Tupaia_belangeri
ENSXMAG00000002353	thoc1	99	66.104	ENSTTRG00000016664	THOC1	98	66.104	Tursiops_truncatus
ENSXMAG00000002353	thoc1	99	72.393	ENSUAMG00000002527	THOC1	98	72.457	Ursus_americanus
ENSXMAG00000002353	thoc1	99	72.393	ENSUMAG00000019693	THOC1	98	72.393	Ursus_maritimus
ENSXMAG00000002353	thoc1	67	65.145	ENSVPAG00000003726	-	66	65.145	Vicugna_pacos
ENSXMAG00000002353	thoc1	99	72.239	ENSVVUG00000004384	THOC1	98	72.239	Vulpes_vulpes
ENSXMAG00000002353	thoc1	99	70.365	ENSXETG00000003155	thoc1	97	70.365	Xenopus_tropicalis
ENSXMAG00000002353	thoc1	96	91.574	ENSXCOG00000016085	thoc1	91	91.574	Xiphophorus_couchianus