EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002357 (Gene tree)
Gene ID: 102232768
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 4648 bases
Position: chr15:5155624-5160271
Accession: 102232768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002361	RNase_H	PF00075.24	4.4e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002366	-	1907	XM_005814881	ENSXMAP00000002361	295 (aa)	XP_005814938	M3ZJG9

Gene Model

Click here to download ENSXMAG00000002357's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002357	rnaseh1	90	53.558	ENSG00000171865	RNASEH1	90	53.558	Homo_sapiens
ENSXMAG00000002357	rnaseh1	99	71.575	ENSAPOG00000000412	rnaseh1	97	71.575	Acanthochromis_polyacanthus
ENSXMAG00000002357	rnaseh1	90	52.985	ENSAMEG00000018433	RNASEH1	89	53.383	Ailuropoda_melanoleuca
ENSXMAG00000002357	rnaseh1	99	73.810	ENSACIG00000014666	rnaseh1	96	73.810	Amphilophus_citrinellus
ENSXMAG00000002357	rnaseh1	99	73.469	ENSAOCG00000015210	rnaseh1	98	73.469	Amphiprion_ocellaris
ENSXMAG00000002357	rnaseh1	99	73.559	ENSAPEG00000014104	rnaseh1	98	73.559	Amphiprion_percula
ENSXMAG00000002357	rnaseh1	99	72.109	ENSATEG00000000598	rnaseh1	96	75.556	Anabas_testudineus
ENSXMAG00000002357	rnaseh1	86	54.054	ENSAPLG00000001961	RNASEH1	100	54.231	Anas_platyrhynchos
ENSXMAG00000002357	rnaseh1	91	47.667	ENSACAG00000016857	rnaseh1	93	47.667	Anolis_carolinensis
ENSXMAG00000002357	rnaseh1	90	53.383	ENSANAG00000024055	RNASEH1	90	53.383	Aotus_nancymaae
ENSXMAG00000002357	rnaseh1	99	74.247	ENSACLG00000006741	rnaseh1	96	74.582	Astatotilapia_calliptera
ENSXMAG00000002357	rnaseh1	99	49.141	ENSAMXG00000042940	rnaseh1	97	54.909	Astyanax_mexicanus
ENSXMAG00000002357	rnaseh1	89	56.226	ENSBTAG00000016235	RNASEH1	91	55.515	Bos_taurus
ENSXMAG00000002357	rnaseh1	89	37.786	WBGene00004382	rnh-1.0	95	37.786	Caenorhabditis_elegans
ENSXMAG00000002357	rnaseh1	90	52.941	ENSCJAG00000035450	RNASEH1	90	52.941	Callithrix_jacchus
ENSXMAG00000002357	rnaseh1	98	50.000	ENSCAFG00000003259	RNASEH1	98	50.000	Canis_familiaris
ENSXMAG00000002357	rnaseh1	51	63.576	ENSCAFG00020004994	RNASEH1	97	63.576	Canis_lupus_dingo
ENSXMAG00000002357	rnaseh1	82	44.898	ENSCHIG00000022230	-	99	44.898	Capra_hircus
ENSXMAG00000002357	rnaseh1	89	55.263	ENSCHIG00000022264	-	89	55.263	Capra_hircus
ENSXMAG00000002357	rnaseh1	90	50.752	ENSTSYG00000012926	RNASEH1	89	50.752	Carlito_syrichta
ENSXMAG00000002357	rnaseh1	83	54.217	ENSCAPG00000004813	RNASEH1	97	54.217	Cavia_aperea
ENSXMAG00000002357	rnaseh1	89	53.933	ENSCPOG00000022278	Rnaseh1	86	53.933	Cavia_porcellus
ENSXMAG00000002357	rnaseh1	90	54.044	ENSCCAG00000038017	RNASEH1	90	54.044	Cebus_capucinus
ENSXMAG00000002357	rnaseh1	90	53.731	ENSCATG00000016515	-	90	53.731	Cercocebus_atys
ENSXMAG00000002357	rnaseh1	90	48.679	ENSCATG00000016818	-	89	48.679	Cercocebus_atys
ENSXMAG00000002357	rnaseh1	89	54.135	ENSCLAG00000002440	RNASEH1	89	54.135	Chinchilla_lanigera
ENSXMAG00000002357	rnaseh1	90	53.731	ENSCSAG00000006943	RNASEH1	90	53.731	Chlorocebus_sabaeus
ENSXMAG00000002357	rnaseh1	55	64.815	ENSCHOG00000008547	RNASEH1	80	64.815	Choloepus_hoffmanni
ENSXMAG00000002357	rnaseh1	90	54.015	ENSCPBG00000021620	RNASEH1	99	54.015	Chrysemys_picta_bellii
ENSXMAG00000002357	rnaseh1	99	37.500	ENSCING00000014054	-	100	37.500	Ciona_intestinalis
ENSXMAG00000002357	rnaseh1	76	37.339	ENSCSAVG00000000009	-	96	37.339	Ciona_savignyi
ENSXMAG00000002357	rnaseh1	90	54.104	ENSCANG00000037763	RNASEH1	90	54.104	Colobus_angolensis_palliatus
ENSXMAG00000002357	rnaseh1	90	53.358	ENSCGRG00001008950	Rnaseh1	90	53.333	Cricetulus_griseus_chok1gshd
ENSXMAG00000002357	rnaseh1	90	53.358	ENSCGRG00000006029	Rnaseh1	90	53.333	Cricetulus_griseus_crigri
ENSXMAG00000002357	rnaseh1	99	65.000	ENSCSEG00000005741	rnaseh1	95	68.231	Cynoglossus_semilaevis
ENSXMAG00000002357	rnaseh1	99	81.973	ENSCVAG00000018717	rnaseh1	97	81.973	Cyprinodon_variegatus
ENSXMAG00000002357	rnaseh1	91	65.818	ENSDARG00000042571	rnaseh1	98	65.818	Danio_rerio
ENSXMAG00000002357	rnaseh1	90	54.307	ENSDNOG00000016056	RNASEH1	90	54.307	Dasypus_novemcinctus
ENSXMAG00000002357	rnaseh1	90	51.493	ENSDORG00000000704	Rnaseh1	90	51.493	Dipodomys_ordii
ENSXMAG00000002357	rnaseh1	89	39.655	FBgn0023171	rnh1	92	39.655	Drosophila_melanogaster
ENSXMAG00000002357	rnaseh1	90	50.752	ENSETEG00000012674	RNASEH1	89	50.752	Echinops_telfairi
ENSXMAG00000002357	rnaseh1	89	45.693	ENSEBUG00000006116	rnaseh1	78	45.693	Eptatretus_burgeri
ENSXMAG00000002357	rnaseh1	90	43.377	ENSEBUG00000008898	rnaseh1	99	43.377	Eptatretus_burgeri
ENSXMAG00000002357	rnaseh1	90	54.478	ENSEASG00005022200	RNASEH1	88	54.478	Equus_asinus_asinus
ENSXMAG00000002357	rnaseh1	90	54.478	ENSECAG00000020695	RNASEH1	88	54.478	Equus_caballus
ENSXMAG00000002357	rnaseh1	99	65.667	ENSELUG00000010112	rnaseh1	99	65.667	Esox_lucius
ENSXMAG00000002357	rnaseh1	89	53.409	ENSFCAG00000025832	RNASEH1	89	53.409	Felis_catus
ENSXMAG00000002357	rnaseh1	91	54.152	ENSFALG00000002069	RNASEH1	93	54.152	Ficedula_albicollis
ENSXMAG00000002357	rnaseh1	89	51.852	ENSFDAG00000002035	RNASEH1	79	51.852	Fukomys_damarensis
ENSXMAG00000002357	rnaseh1	99	65.529	ENSGMOG00000013818	rnaseh1	99	65.529	Gadus_morhua
ENSXMAG00000002357	rnaseh1	96	51.701	ENSGALG00000016389	RNASEH1	99	51.701	Gallus_gallus
ENSXMAG00000002357	rnaseh1	100	92.542	ENSGAFG00000001776	rnaseh1	100	92.542	Gambusia_affinis
ENSXMAG00000002357	rnaseh1	99	70.648	ENSGACG00000011935	rnaseh1	97	70.648	Gasterosteus_aculeatus
ENSXMAG00000002357	rnaseh1	99	51.282	ENSGAGG00000009150	RNASEH1	70	51.603	Gopherus_agassizii
ENSXMAG00000002357	rnaseh1	90	53.759	ENSGGOG00000034822	RNASEH1	90	53.759	Gorilla_gorilla
ENSXMAG00000002357	rnaseh1	99	73.913	ENSHBUG00000004666	rnaseh1	96	74.247	Haplochromis_burtoni
ENSXMAG00000002357	rnaseh1	89	52.852	ENSHGLG00000002585	Rnaseh1	82	52.852	Heterocephalus_glaber_female
ENSXMAG00000002357	rnaseh1	89	52.852	ENSHGLG00100005105	Rnaseh1	82	52.852	Heterocephalus_glaber_male
ENSXMAG00000002357	rnaseh1	99	64.214	ENSHCOG00000012329	rnaseh1	96	65.217	Hippocampus_comes
ENSXMAG00000002357	rnaseh1	100	56.419	ENSIPUG00000023060	rnaseh1	99	59.559	Ictalurus_punctatus
ENSXMAG00000002357	rnaseh1	89	53.962	ENSSTOG00000012774	RNASEH1	91	53.962	Ictidomys_tridecemlineatus
ENSXMAG00000002357	rnaseh1	81	52.500	ENSJJAG00000020238	Rnaseh1	90	52.500	Jaculus_jaculus
ENSXMAG00000002357	rnaseh1	90	49.057	ENSJJAG00000021481	-	89	49.057	Jaculus_jaculus
ENSXMAG00000002357	rnaseh1	88	43.629	ENSJJAG00000008994	-	89	43.629	Jaculus_jaculus
ENSXMAG00000002357	rnaseh1	99	71.959	ENSKMAG00000001373	rnaseh1	98	71.959	Kryptolebias_marmoratus
ENSXMAG00000002357	rnaseh1	99	66.781	ENSLBEG00000004480	rnaseh1	97	72.015	Labrus_bergylta
ENSXMAG00000002357	rnaseh1	92	54.839	ENSLACG00000007100	RNASEH1	90	56.071	Latimeria_chalumnae
ENSXMAG00000002357	rnaseh1	92	58.363	ENSLOCG00000017212	rnaseh1	99	58.719	Lepisosteus_oculatus
ENSXMAG00000002357	rnaseh1	89	54.815	ENSLAFG00000015091	RNASEH1	89	54.815	Loxodonta_africana
ENSXMAG00000002357	rnaseh1	90	54.104	ENSMFAG00000000063	-	90	54.104	Macaca_fascicularis
ENSXMAG00000002357	rnaseh1	92	48.519	ENSMFAG00000002323	-	91	48.519	Macaca_fascicularis
ENSXMAG00000002357	rnaseh1	92	47.535	ENSMMUG00000019280	-	91	47.535	Macaca_mulatta
ENSXMAG00000002357	rnaseh1	90	54.104	ENSMNEG00000040183	-	90	54.104	Macaca_nemestrina
ENSXMAG00000002357	rnaseh1	92	47.535	ENSMNEG00000029676	-	91	47.535	Macaca_nemestrina
ENSXMAG00000002357	rnaseh1	92	48.592	ENSMLEG00000028662	-	91	48.592	Mandrillus_leucophaeus
ENSXMAG00000002357	rnaseh1	84	54.000	ENSMLEG00000039352	-	98	54.000	Mandrillus_leucophaeus
ENSXMAG00000002357	rnaseh1	99	70.508	ENSMAMG00000019725	rnaseh1	95	73.801	Mastacembelus_armatus
ENSXMAG00000002357	rnaseh1	99	74.247	ENSMZEG00005013006	rnaseh1	96	74.582	Maylandia_zebra
ENSXMAG00000002357	rnaseh1	81	52.439	ENSMGAG00000013979	RNASEH1	100	52.439	Meleagris_gallopavo
ENSXMAG00000002357	rnaseh1	90	53.532	ENSMAUG00000014957	Rnaseh1	90	53.532	Mesocricetus_auratus
ENSXMAG00000002357	rnaseh1	89	54.851	ENSMICG00000033156	RNASEH1	88	54.851	Microcebus_murinus
ENSXMAG00000002357	rnaseh1	90	53.208	ENSMOCG00000015522	Rnaseh1	90	53.208	Microtus_ochrogaster
ENSXMAG00000002357	rnaseh1	100	70.847	ENSMMOG00000015902	rnaseh1	97	70.847	Mola_mola
ENSXMAG00000002357	rnaseh1	99	49.492	ENSMODG00000014491	-	98	49.492	Monodelphis_domestica
ENSXMAG00000002357	rnaseh1	79	48.101	ENSMODG00000028814	-	91	50.000	Monodelphis_domestica
ENSXMAG00000002357	rnaseh1	99	69.153	ENSMALG00000010565	rnaseh1	98	69.153	Monopterus_albus
ENSXMAG00000002357	rnaseh1	90	54.135	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	54.135	Mus_caroli
ENSXMAG00000002357	rnaseh1	90	54.511	ENSMUSG00000020630	Rnaseh1	90	54.511	Mus_musculus
ENSXMAG00000002357	rnaseh1	89	52.852	MGP_PahariEiJ_G0029418	Rnaseh1	90	53.704	Mus_pahari
ENSXMAG00000002357	rnaseh1	90	54.135	MGP_SPRETEiJ_G0018502	Rnaseh1	90	54.135	Mus_spretus
ENSXMAG00000002357	rnaseh1	51	63.576	ENSMPUG00000012984	RNASEH1	73	63.576	Mustela_putorius_furo
ENSXMAG00000002357	rnaseh1	90	54.104	ENSNGAG00000015966	Rnaseh1	85	54.104	Nannospalax_galili
ENSXMAG00000002357	rnaseh1	99	73.579	ENSNBRG00000008739	rnaseh1	96	73.913	Neolamprologus_brichardi
ENSXMAG00000002357	rnaseh1	82	46.721	ENSNLEG00000000059	-	88	46.721	Nomascus_leucogenys
ENSXMAG00000002357	rnaseh1	90	47.761	ENSNLEG00000015400	RNASEH1	88	47.761	Nomascus_leucogenys
ENSXMAG00000002357	rnaseh1	99	35.154	ENSMEUG00000003610	-	99	35.154	Notamacropus_eugenii
ENSXMAG00000002357	rnaseh1	89	57.034	ENSOPRG00000005072	RNASEH1	89	57.034	Ochotona_princeps
ENSXMAG00000002357	rnaseh1	89	55.263	ENSODEG00000000235	Rnaseh1	86	55.263	Octodon_degus
ENSXMAG00000002357	rnaseh1	92	77.091	ENSONIG00000018697	rnaseh1	99	77.091	Oreochromis_niloticus
ENSXMAG00000002357	rnaseh1	90	53.903	ENSOCUG00000006117	RNASEH1	90	53.903	Oryctolagus_cuniculus
ENSXMAG00000002357	rnaseh1	92	73.162	ENSORLG00000018127	rnaseh1	97	73.162	Oryzias_latipes
ENSXMAG00000002357	rnaseh1	99	69.492	ENSORLG00020013660	rnaseh1	97	69.492	Oryzias_latipes_hni
ENSXMAG00000002357	rnaseh1	99	69.492	ENSORLG00015011338	rnaseh1	97	69.492	Oryzias_latipes_hsok
ENSXMAG00000002357	rnaseh1	91	68.773	ENSOMEG00000004710	rnaseh1	99	68.773	Oryzias_melastigma
ENSXMAG00000002357	rnaseh1	89	54.478	ENSOGAG00000017176	RNASEH1	89	54.478	Otolemur_garnettii
ENSXMAG00000002357	rnaseh1	92	47.183	ENSOARG00000005386	RNASEH1	92	47.183	Ovis_aries
ENSXMAG00000002357	rnaseh1	90	53.558	ENSPPAG00000034221	RNASEH1	90	53.558	Pan_paniscus
ENSXMAG00000002357	rnaseh1	89	53.409	ENSPPRG00000015513	RNASEH1	89	53.409	Panthera_pardus
ENSXMAG00000002357	rnaseh1	84	53.226	ENSPTIG00000019034	RNASEH1	83	53.226	Panthera_tigris_altaica
ENSXMAG00000002357	rnaseh1	83	47.809	ENSPTRG00000043403	-	91	47.809	Pan_troglodytes
ENSXMAG00000002357	rnaseh1	90	53.558	ENSPTRG00000011614	RNASEH1	90	53.558	Pan_troglodytes
ENSXMAG00000002357	rnaseh1	90	53.358	ENSPANG00000000443	RNASEH1	98	53.175	Papio_anubis
ENSXMAG00000002357	rnaseh1	90	49.434	ENSPANG00000018246	-	89	49.434	Papio_anubis
ENSXMAG00000002357	rnaseh1	91	58.582	ENSPKIG00000003146	rnaseh1	99	59.420	Paramormyrops_kingsleyae
ENSXMAG00000002357	rnaseh1	90	53.455	ENSPSIG00000002937	RNASEH1	99	52.000	Pelodiscus_sinensis
ENSXMAG00000002357	rnaseh1	99	62.416	ENSPMGG00000017463	rnaseh1	99	63.230	Periophthalmus_magnuspinnatus
ENSXMAG00000002357	rnaseh1	90	53.558	ENSPEMG00000022465	-	90	54.717	Peromyscus_maniculatus_bairdii
ENSXMAG00000002357	rnaseh1	52	32.903	ENSPCIG00000026047	-	87	32.903	Phascolarctos_cinereus
ENSXMAG00000002357	rnaseh1	99	47.475	ENSPCIG00000023334	-	98	47.475	Phascolarctos_cinereus
ENSXMAG00000002357	rnaseh1	99	93.174	ENSPFOG00000002841	rnaseh1	99	93.174	Poecilia_formosa
ENSXMAG00000002357	rnaseh1	75	75.676	ENSPLAG00000021349	-	85	75.676	Poecilia_latipinna
ENSXMAG00000002357	rnaseh1	99	93.515	ENSPMEG00000016826	rnaseh1	99	93.515	Poecilia_mexicana
ENSXMAG00000002357	rnaseh1	99	91.639	ENSPREG00000012197	rnaseh1	99	91.639	Poecilia_reticulata
ENSXMAG00000002357	rnaseh1	90	43.657	ENSPPYG00000025873	RNASEH1	88	43.657	Pongo_abelii
ENSXMAG00000002357	rnaseh1	82	50.813	ENSPPYG00000008067	-	90	50.813	Pongo_abelii
ENSXMAG00000002357	rnaseh1	90	53.309	ENSPCAG00000002500	RNASEH1	90	53.309	Procavia_capensis
ENSXMAG00000002357	rnaseh1	90	49.259	ENSPCOG00000019444	RNASEH1	89	49.259	Propithecus_coquereli
ENSXMAG00000002357	rnaseh1	89	52.593	ENSPVAG00000002070	RNASEH1	89	52.593	Pteropus_vampyrus
ENSXMAG00000002357	rnaseh1	99	73.913	ENSPNYG00000001292	rnaseh1	96	74.247	Pundamilia_nyererei
ENSXMAG00000002357	rnaseh1	99	59.667	ENSPNAG00000022344	rnaseh1	99	59.667	Pygocentrus_nattereri
ENSXMAG00000002357	rnaseh1	89	51.838	ENSRNOG00000008584	Rnaseh1	90	54.717	Rattus_norvegicus
ENSXMAG00000002357	rnaseh1	90	54.104	ENSRBIG00000034222	RNASEH1	89	54.104	Rhinopithecus_bieti
ENSXMAG00000002357	rnaseh1	90	54.104	ENSRROG00000041761	RNASEH1	89	54.104	Rhinopithecus_roxellana
ENSXMAG00000002357	rnaseh1	89	43.548	YMR234W	-	92	43.548	Saccharomyces_cerevisiae
ENSXMAG00000002357	rnaseh1	89	54.815	ENSSBOG00000025411	RNASEH1	89	54.815	Saimiri_boliviensis_boliviensis
ENSXMAG00000002357	rnaseh1	90	53.704	ENSSHAG00000013051	RNASEH1	88	53.704	Sarcophilus_harrisii
ENSXMAG00000002357	rnaseh1	99	59.804	ENSSFOG00015002709	rnaseh1	99	59.804	Scleropages_formosus
ENSXMAG00000002357	rnaseh1	99	70.068	ENSSMAG00000007586	rnaseh1	97	70.068	Scophthalmus_maximus
ENSXMAG00000002357	rnaseh1	96	72.085	ENSSDUG00000008217	rnaseh1	94	74.157	Seriola_dumerili
ENSXMAG00000002357	rnaseh1	89	70.229	ENSSLDG00000000442	rnaseh1	95	72.510	Seriola_lalandi_dorsalis
ENSXMAG00000002357	rnaseh1	91	54.647	ENSSPUG00000006644	RNASEH1	93	54.647	Sphenodon_punctatus
ENSXMAG00000002357	rnaseh1	99	73.469	ENSSPAG00000009353	rnaseh1	97	73.469	Stegastes_partitus
ENSXMAG00000002357	rnaseh1	89	55.474	ENSSSCG00000025305	RNASEH1	89	55.474	Sus_scrofa
ENSXMAG00000002357	rnaseh1	96	52.542	ENSTGUG00000012980	RNASEH1	97	52.508	Taeniopygia_guttata
ENSXMAG00000002357	rnaseh1	95	70.107	ENSTRUG00000015774	rnaseh1	96	71.375	Takifugu_rubripes
ENSXMAG00000002357	rnaseh1	91	73.234	ENSTNIG00000010715	rnaseh1	96	73.234	Tetraodon_nigroviridis
ENSXMAG00000002357	rnaseh1	90	51.292	ENSTTRG00000001615	RNASEH1	90	51.292	Tursiops_truncatus
ENSXMAG00000002357	rnaseh1	51	62.914	ENSUAMG00000018254	RNASEH1	78	62.914	Ursus_americanus
ENSXMAG00000002357	rnaseh1	69	50.239	ENSUMAG00000003941	RNASEH1	65	50.239	Ursus_maritimus
ENSXMAG00000002357	rnaseh1	89	47.566	ENSVPAG00000011589	RNASEH1	89	47.566	Vicugna_pacos
ENSXMAG00000002357	rnaseh1	98	50.000	ENSVVUG00000008633	RNASEH1	88	50.000	Vulpes_vulpes
ENSXMAG00000002357	rnaseh1	66	54.545	ENSXETG00000030371	-	96	54.545	Xenopus_tropicalis
ENSXMAG00000002357	rnaseh1	95	53.147	ENSXETG00000001212	rnaseh1	97	53.287	Xenopus_tropicalis