EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002451 (Gene tree)
Gene ID: 102233831
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 11373 bases
Position: chr21:8518764-8530136
Accession: 102233831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002454	MA3	PF02847.17	3.5e-23	1	1
ENSXMAP00000002454	MIF4G	PF02854.19	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002459	-	6304	XM_005798580	ENSXMAP00000002454	828 (aa)	XP_005798637	M3ZJR2

Gene Model

Click here to download ENSXMAG00000002451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002451	nom1	97	54.940	ENSG00000146909	NOM1	95	55.193	Homo_sapiens
ENSXMAG00000002451	nom1	64	87.617	ENSAPOG00000012073	nom1	98	74.171	Acanthochromis_polyacanthus
ENSXMAG00000002451	nom1	80	57.994	ENSAMEG00000001412	NOM1	96	58.621	Ailuropoda_melanoleuca
ENSXMAG00000002451	nom1	89	86.450	ENSACIG00000018050	nom1	98	73.742	Amphilophus_citrinellus
ENSXMAG00000002451	nom1	98	73.428	ENSAOCG00000006229	nom1	98	74.614	Amphiprion_ocellaris
ENSXMAG00000002451	nom1	98	73.690	ENSAPEG00000015994	nom1	98	74.286	Amphiprion_percula
ENSXMAG00000002451	nom1	98	75.676	ENSATEG00000005405	nom1	98	74.939	Anabas_testudineus
ENSXMAG00000002451	nom1	78	58.902	ENSAPLG00000006585	NOM1	98	57.540	Anas_platyrhynchos
ENSXMAG00000002451	nom1	93	50.061	ENSACAG00000011192	NOM1	62	65.730	Anolis_carolinensis
ENSXMAG00000002451	nom1	98	73.761	ENSACLG00000000033	nom1	98	73.918	Astatotilapia_calliptera
ENSXMAG00000002451	nom1	64	74.906	ENSAMXG00000041486	nom1	63	73.626	Astyanax_mexicanus
ENSXMAG00000002451	nom1	97	52.048	ENSBTAG00000016435	NOM1	97	51.355	Bos_taurus
ENSXMAG00000002451	nom1	97	52.738	ENSCJAG00000004336	NOM1	95	53.606	Callithrix_jacchus
ENSXMAG00000002451	nom1	56	43.542	ENSCAFG00000029845	-	93	42.510	Canis_familiaris
ENSXMAG00000002451	nom1	97	53.269	ENSCAFG00020005121	NOM1	95	51.918	Canis_lupus_dingo
ENSXMAG00000002451	nom1	81	57.956	ENSCHIG00000020102	NOM1	97	49.769	Capra_hircus
ENSXMAG00000002451	nom1	96	55.420	ENSTSYG00000000227	NOM1	62	67.754	Carlito_syrichta
ENSXMAG00000002451	nom1	62	68.401	ENSCAPG00000016273	NOM1	99	68.401	Cavia_aperea
ENSXMAG00000002451	nom1	99	52.302	ENSCPOG00000025538	NOM1	98	52.123	Cavia_porcellus
ENSXMAG00000002451	nom1	89	67.857	ENSCCAG00000014944	NOM1	99	67.045	Cebus_capucinus
ENSXMAG00000002451	nom1	85	58.543	ENSCLAG00000000267	NOM1	63	65.370	Chinchilla_lanigera
ENSXMAG00000002451	nom1	72	66.920	ENSCPBG00000018215	NOM1	83	66.920	Chrysemys_picta_bellii
ENSXMAG00000002451	nom1	84	37.412	ENSCING00000005248	-	93	37.393	Ciona_intestinalis
ENSXMAG00000002451	nom1	62	68.330	ENSCANG00000041984	NOM1	89	68.330	Colobus_angolensis_palliatus
ENSXMAG00000002451	nom1	80	59.853	ENSCGRG00001020293	Nom1	96	53.846	Cricetulus_griseus_chok1gshd
ENSXMAG00000002451	nom1	62	67.692	ENSCGRG00000005405	Nom1	97	67.692	Cricetulus_griseus_crigri
ENSXMAG00000002451	nom1	94	70.281	ENSCSEG00000000932	nom1	98	68.254	Cynoglossus_semilaevis
ENSXMAG00000002451	nom1	100	80.523	ENSCVAG00000007562	nom1	100	80.523	Cyprinodon_variegatus
ENSXMAG00000002451	nom1	100	62.605	ENSDARG00000060027	nom1	100	75.565	Danio_rerio
ENSXMAG00000002451	nom1	63	57.576	ENSDORG00000015682	Nom1	99	52.250	Dipodomys_ordii
ENSXMAG00000002451	nom1	86	35.381	FBgn0035336	CG9004	77	34.864	Drosophila_melanogaster
ENSXMAG00000002451	nom1	72	56.905	ENSETEG00000003104	NOM1	87	56.905	Echinops_telfairi
ENSXMAG00000002451	nom1	52	48.624	ENSEBUG00000010077	nom1	96	48.624	Eptatretus_burgeri
ENSXMAG00000002451	nom1	80	61.961	ENSEASG00005001489	NOM1	95	53.800	Equus_asinus_asinus
ENSXMAG00000002451	nom1	63	68.714	ENSECAG00000007596	NOM1	89	54.028	Equus_caballus
ENSXMAG00000002451	nom1	66	76.225	ENSELUG00000006266	nom1	98	64.336	Esox_lucius
ENSXMAG00000002451	nom1	80	58.272	ENSFCAG00000006467	NOM1	95	52.358	Felis_catus
ENSXMAG00000002451	nom1	80	58.112	ENSFALG00000006904	NOM1	99	58.873	Ficedula_albicollis
ENSXMAG00000002451	nom1	99	52.375	ENSFDAG00000016241	NOM1	97	53.650	Fukomys_damarensis
ENSXMAG00000002451	nom1	98	79.636	ENSFHEG00000015974	nom1	98	79.636	Fundulus_heteroclitus
ENSXMAG00000002451	nom1	94	61.021	ENSGMOG00000005129	nom1	72	70.324	Gadus_morhua
ENSXMAG00000002451	nom1	86	56.414	ENSGALG00000006437	NOM1	92	51.559	Gallus_gallus
ENSXMAG00000002451	nom1	100	96.386	ENSGAFG00000003211	nom1	100	96.386	Gambusia_affinis
ENSXMAG00000002451	nom1	85	56.653	ENSGAGG00000014347	NOM1	85	66.856	Gopherus_agassizii
ENSXMAG00000002451	nom1	65	66.728	ENSGGOG00000010920	NOM1	59	66.728	Gorilla_gorilla
ENSXMAG00000002451	nom1	98	73.939	ENSHBUG00000014616	nom1	98	74.096	Haplochromis_burtoni
ENSXMAG00000002451	nom1	97	53.508	ENSHGLG00000007392	NOM1	96	53.073	Heterocephalus_glaber_female
ENSXMAG00000002451	nom1	86	68.910	ENSHGLG00100014407	NOM1	96	53.073	Heterocephalus_glaber_male
ENSXMAG00000002451	nom1	64	71.780	ENSIPUG00000013980	nom1	98	58.929	Ictalurus_punctatus
ENSXMAG00000002451	nom1	69	64.062	ENSSTOG00000031736	NOM1	91	68.522	Ictidomys_tridecemlineatus
ENSXMAG00000002451	nom1	59	68.247	ENSJJAG00000011716	Nom1	98	68.247	Jaculus_jaculus
ENSXMAG00000002451	nom1	98	69.529	ENSLBEG00000009252	nom1	98	72.471	Labrus_bergylta
ENSXMAG00000002451	nom1	82	62.678	ENSLACG00000011777	NOM1	98	56.659	Latimeria_chalumnae
ENSXMAG00000002451	nom1	98	61.237	ENSLOCG00000012452	nom1	100	62.015	Lepisosteus_oculatus
ENSXMAG00000002451	nom1	97	49.027	ENSLAFG00000007119	NOM1	63	61.494	Loxodonta_africana
ENSXMAG00000002451	nom1	97	51.018	ENSMMUG00000039033	NOM1	95	52.449	Macaca_mulatta
ENSXMAG00000002451	nom1	62	68.330	ENSMLEG00000037062	NOM1	98	68.330	Mandrillus_leucophaeus
ENSXMAG00000002451	nom1	98	71.749	ENSMAMG00000004118	nom1	98	71.734	Mastacembelus_armatus
ENSXMAG00000002451	nom1	98	73.640	ENSMZEG00005000384	nom1	98	73.798	Maylandia_zebra
ENSXMAG00000002451	nom1	82	58.781	ENSMGAG00000005051	NOM1	99	58.286	Meleagris_gallopavo
ENSXMAG00000002451	nom1	97	53.818	ENSMAUG00000017988	Nom1	95	53.706	Mesocricetus_auratus
ENSXMAG00000002451	nom1	62	66.795	ENSMICG00000017531	NOM1	96	53.874	Microcebus_murinus
ENSXMAG00000002451	nom1	97	53.949	ENSMOCG00000015962	Nom1	95	54.070	Microtus_ochrogaster
ENSXMAG00000002451	nom1	99	67.658	ENSMMOG00000004419	nom1	98	67.425	Mola_mola
ENSXMAG00000002451	nom1	66	67.818	ENSMODG00000005177	NOM1	98	54.051	Monodelphis_domestica
ENSXMAG00000002451	nom1	92	72.308	ENSMALG00000008800	nom1	98	71.502	Monopterus_albus
ENSXMAG00000002451	nom1	97	53.762	MGP_CAROLIEiJ_G0027043	Nom1	94	53.968	Mus_caroli
ENSXMAG00000002451	nom1	97	54.313	ENSMUSG00000001569	Nom1	94	54.015	Mus_musculus
ENSXMAG00000002451	nom1	97	54.192	MGP_SPRETEiJ_G0028039	Nom1	94	53.893	Mus_spretus
ENSXMAG00000002451	nom1	80	55.930	ENSMPUG00000009745	NOM1	75	63.340	Mustela_putorius_furo
ENSXMAG00000002451	nom1	70	62.500	ENSMLUG00000009129	NOM1	92	64.982	Myotis_lucifugus
ENSXMAG00000002451	nom1	98	74.455	ENSNBRG00000016429	nom1	95	85.227	Neolamprologus_brichardi
ENSXMAG00000002451	nom1	62	66.922	ENSNLEG00000000238	NOM1	60	66.475	Nomascus_leucogenys
ENSXMAG00000002451	nom1	69	57.664	ENSMEUG00000001108	NOM1	81	52.514	Notamacropus_eugenii
ENSXMAG00000002451	nom1	50	58.537	ENSOPRG00000014676	NOM1	84	44.361	Ochotona_princeps
ENSXMAG00000002451	nom1	80	58.918	ENSODEG00000009399	NOM1	98	57.410	Octodon_degus
ENSXMAG00000002451	nom1	94	74.559	ENSONIG00000005958	nom1	99	73.990	Oreochromis_niloticus
ENSXMAG00000002451	nom1	56	67.171	ENSOANG00000006139	-	97	67.171	Ornithorhynchus_anatinus
ENSXMAG00000002451	nom1	97	54.524	ENSOCUG00000004071	-	95	54.424	Oryctolagus_cuniculus
ENSXMAG00000002451	nom1	94	45.696	ENSOCUG00000021448	-	71	54.302	Oryctolagus_cuniculus
ENSXMAG00000002451	nom1	99	70.379	ENSORLG00000010541	nom1	98	70.361	Oryzias_latipes
ENSXMAG00000002451	nom1	92	71.483	ENSORLG00020010789	nom1	100	71.483	Oryzias_latipes_hni
ENSXMAG00000002451	nom1	99	70.749	ENSORLG00015010475	nom1	100	71.392	Oryzias_latipes_hsok
ENSXMAG00000002451	nom1	99	70.651	ENSOMEG00000004219	nom1	98	71.942	Oryzias_melastigma
ENSXMAG00000002451	nom1	62	68.714	ENSOGAG00000001124	NOM1	85	68.714	Otolemur_garnettii
ENSXMAG00000002451	nom1	81	57.664	ENSOARG00000007261	NOM1	93	56.162	Ovis_aries
ENSXMAG00000002451	nom1	80	61.347	ENSPPAG00000041374	NOM1	95	54.952	Pan_paniscus
ENSXMAG00000002451	nom1	80	56.957	ENSPTIG00000013532	NOM1	94	58.440	Panthera_tigris_altaica
ENSXMAG00000002451	nom1	80	61.493	ENSPTRG00000019917	NOM1	95	54.831	Pan_troglodytes
ENSXMAG00000002451	nom1	97	54.644	ENSPANG00000007605	NOM1	60	68.522	Papio_anubis
ENSXMAG00000002451	nom1	100	58.488	ENSPKIG00000005825	nom1	98	59.367	Paramormyrops_kingsleyae
ENSXMAG00000002451	nom1	63	67.424	ENSPSIG00000017848	NOM1	88	67.424	Pelodiscus_sinensis
ENSXMAG00000002451	nom1	98	70.146	ENSPMGG00000002577	nom1	98	70.552	Periophthalmus_magnuspinnatus
ENSXMAG00000002451	nom1	97	54.202	ENSPEMG00000024180	Nom1	95	55.097	Peromyscus_maniculatus_bairdii
ENSXMAG00000002451	nom1	65	66.667	ENSPCIG00000027941	NOM1	60	66.667	Phascolarctos_cinereus
ENSXMAG00000002451	nom1	100	92.536	ENSPFOG00000015771	nom1	100	93.009	Poecilia_formosa
ENSXMAG00000002451	nom1	67	94.840	ENSPLAG00000007856	nom1	100	91.127	Poecilia_latipinna
ENSXMAG00000002451	nom1	100	92.417	ENSPMEG00000014155	nom1	100	92.536	Poecilia_mexicana
ENSXMAG00000002451	nom1	100	93.525	ENSPREG00000008850	nom1	100	94.365	Poecilia_reticulata
ENSXMAG00000002451	nom1	97	50.784	ENSPPYG00000018222	NOM1	95	51.016	Pongo_abelii
ENSXMAG00000002451	nom1	74	61.628	ENSPCAG00000000440	NOM1	80	61.628	Procavia_capensis
ENSXMAG00000002451	nom1	62	66.603	ENSPCOG00000015222	NOM1	98	66.603	Propithecus_coquereli
ENSXMAG00000002451	nom1	97	51.914	ENSPVAG00000014760	NOM1	95	51.551	Pteropus_vampyrus
ENSXMAG00000002451	nom1	98	73.398	ENSPNYG00000006975	nom1	97	83.364	Pundamilia_nyererei
ENSXMAG00000002451	nom1	97	51.217	ENSRNOG00000048969	AABR07059041.1	99	50.914	Rattus_norvegicus
ENSXMAG00000002451	nom1	97	54.096	ENSRBIG00000037042	NOM1	95	54.622	Rhinopithecus_bieti
ENSXMAG00000002451	nom1	97	53.976	ENSRROG00000037293	NOM1	95	54.502	Rhinopithecus_roxellana
ENSXMAG00000002451	nom1	60	30.667	YLR336C	-	50	32.026	Saccharomyces_cerevisiae
ENSXMAG00000002451	nom1	50	61.743	ENSSHAG00000002835	-	99	61.743	Sarcophilus_harrisii
ENSXMAG00000002451	nom1	66	67.091	ENSSHAG00000017998	-	99	58.840	Sarcophilus_harrisii
ENSXMAG00000002451	nom1	59	71.605	ENSSFOG00015003196	nom1	100	71.605	Scleropages_formosus
ENSXMAG00000002451	nom1	99	73.703	ENSSMAG00000011047	nom1	100	73.294	Scophthalmus_maximus
ENSXMAG00000002451	nom1	98	74.017	ENSSDUG00000006834	nom1	98	74.880	Seriola_dumerili
ENSXMAG00000002451	nom1	98	73.293	ENSSLDG00000021812	nom1	98	74.279	Seriola_lalandi_dorsalis
ENSXMAG00000002451	nom1	86	47.919	ENSSPUG00000002556	NOM1	100	68.571	Sphenodon_punctatus
ENSXMAG00000002451	nom1	98	75.059	ENSSPAG00000000953	nom1	98	73.765	Stegastes_partitus
ENSXMAG00000002451	nom1	80	58.358	ENSTGUG00000000702	-	99	57.244	Taeniopygia_guttata
ENSXMAG00000002451	nom1	98	69.734	ENSTRUG00000010239	nom1	98	69.471	Takifugu_rubripes
ENSXMAG00000002451	nom1	98	69.335	ENSTNIG00000012783	nom1	100	68.927	Tetraodon_nigroviridis
ENSXMAG00000002451	nom1	80	59.704	ENSTTRG00000009691	NOM1	95	52.528	Tursiops_truncatus
ENSXMAG00000002451	nom1	97	51.909	ENSUAMG00000025450	NOM1	95	53.118	Ursus_americanus
ENSXMAG00000002451	nom1	85	56.802	ENSUMAG00000014275	NOM1	96	57.615	Ursus_maritimus
ENSXMAG00000002451	nom1	74	67.281	ENSVVUG00000002608	NOM1	95	67.281	Vulpes_vulpes
ENSXMAG00000002451	nom1	86	55.526	ENSXETG00000021611	nom1	82	72.683	Xenopus_tropicalis