EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002598 (Gene tree)
Gene ID: 102221307
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: uncharacterized LOC102221307
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 10545 bases
Position: chr22:13947109-13957653
Accession: 102221307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000031081	RRM_1	PF00076.22	3e-18	1	1
ENSXMAP00000002599	RRM_1	PF00076.22	3.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036412	-	4407	-	ENSXMAP00000031081	471 (aa)	-	-
ENSXMAT00000002604	-	3955	XM_023327587	ENSXMAP00000002599	515 (aa)	XP_023183355	M3ZK57

Gene Model

Click here to download ENSXMAG00000002598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002598	zgc:123010	100	83.237	ENSAPOG00000019633	zgc:123010	100	83.044	Acanthochromis_polyacanthus
ENSXMAG00000002598	zgc:123010	84	50.495	ENSAPOG00000001034	-	83	53.868	Acanthochromis_polyacanthus
ENSXMAG00000002598	zgc:123010	63	34.817	ENSAPOG00000005058	si:dkey-33c12.4	56	34.817	Acanthochromis_polyacanthus
ENSXMAG00000002598	zgc:123010	69	83.662	ENSACIG00000021684	zgc:123010	89	83.662	Amphilophus_citrinellus
ENSXMAG00000002598	zgc:123010	63	34.031	ENSAOCG00000020066	si:dkey-33c12.4	64	30.667	Amphiprion_ocellaris
ENSXMAG00000002598	zgc:123010	100	83.815	ENSAOCG00000005910	zgc:123010	100	83.622	Amphiprion_ocellaris
ENSXMAG00000002598	zgc:123010	56	32.239	ENSAOCG00000000431	-	51	32.239	Amphiprion_ocellaris
ENSXMAG00000002598	zgc:123010	56	31.176	ENSAPEG00000023603	-	52	32.353	Amphiprion_percula
ENSXMAG00000002598	zgc:123010	100	83.815	ENSAPEG00000014305	zgc:123010	100	83.622	Amphiprion_percula
ENSXMAG00000002598	zgc:123010	63	33.509	ENSATEG00000018885	si:dkey-33c12.4	56	33.509	Anabas_testudineus
ENSXMAG00000002598	zgc:123010	99	49.136	ENSATEG00000022160	-	100	48.669	Anabas_testudineus
ENSXMAG00000002598	zgc:123010	100	80.925	ENSATEG00000001220	zgc:123010	100	80.732	Anabas_testudineus
ENSXMAG00000002598	zgc:123010	99	49.713	ENSACLG00000012346	-	100	49.240	Astatotilapia_calliptera
ENSXMAG00000002598	zgc:123010	100	79.151	ENSACLG00000010188	zgc:123010	100	79.344	Astatotilapia_calliptera
ENSXMAG00000002598	zgc:123010	56	38.916	ENSACLG00000003019	-	64	36.620	Astatotilapia_calliptera
ENSXMAG00000002598	zgc:123010	68	32.297	ENSAMXG00000010871	si:dkey-33c12.4	64	33.493	Astyanax_mexicanus
ENSXMAG00000002598	zgc:123010	100	63.519	ENSAMXG00000041967	zgc:123010	100	64.007	Astyanax_mexicanus
ENSXMAG00000002598	zgc:123010	59	32.584	ENSCPBG00000024454	-	60	31.905	Chrysemys_picta_bellii
ENSXMAG00000002598	zgc:123010	88	74.217	ENSCSEG00000006468	zgc:123010	67	72.530	Cynoglossus_semilaevis
ENSXMAG00000002598	zgc:123010	83	30.849	ENSCVAG00000006564	-	71	30.435	Cyprinodon_variegatus
ENSXMAG00000002598	zgc:123010	100	91.683	ENSCVAG00000013288	zgc:123010	100	91.876	Cyprinodon_variegatus
ENSXMAG00000002598	zgc:123010	74	66.839	ENSDARG00000039082	zgc:123010	98	61.458	Danio_rerio
ENSXMAG00000002598	zgc:123010	69	33.333	ENSDARG00000057890	si:dkey-33c12.4	72	32.421	Danio_rerio
ENSXMAG00000002598	zgc:123010	64	36.202	ENSEBUG00000001368	-	58	36.686	Eptatretus_burgeri
ENSXMAG00000002598	zgc:123010	68	31.678	ENSELUG00000001633	-	64	31.678	Esox_lucius
ENSXMAG00000002598	zgc:123010	89	31.204	ENSELUG00000002009	si:dkey-33c12.4	88	34.375	Esox_lucius
ENSXMAG00000002598	zgc:123010	100	64.559	ENSELUG00000022008	zgc:123010	100	65.779	Esox_lucius
ENSXMAG00000002598	zgc:123010	74	60.152	ENSELUG00000021447	-	100	54.269	Esox_lucius
ENSXMAG00000002598	zgc:123010	100	89.362	ENSFHEG00000002306	zgc:123010	100	88.588	Fundulus_heteroclitus
ENSXMAG00000002598	zgc:123010	65	32.737	ENSFHEG00000005521	si:dkey-33c12.4	62	32.057	Fundulus_heteroclitus
ENSXMAG00000002598	zgc:123010	72	78.342	ENSGMOG00000018473	zgc:123010	100	78.342	Gadus_morhua
ENSXMAG00000002598	zgc:123010	55	35.473	ENSGALG00000036747	TTC31	56	35.473	Gallus_gallus
ENSXMAG00000002598	zgc:123010	55	30.816	ENSGAFG00000016594	-	61	38.028	Gambusia_affinis
ENSXMAG00000002598	zgc:123010	100	97.670	ENSGAFG00000009373	zgc:123010	100	97.670	Gambusia_affinis
ENSXMAG00000002598	zgc:123010	72	83.110	ENSGACG00000007620	zgc:123010	100	83.110	Gasterosteus_aculeatus
ENSXMAG00000002598	zgc:123010	63	36.391	ENSGACG00000004936	-	97	36.391	Gasterosteus_aculeatus
ENSXMAG00000002598	zgc:123010	99	50.096	ENSHBUG00000016720	-	100	49.430	Haplochromis_burtoni
ENSXMAG00000002598	zgc:123010	68	35.381	ENSIPUG00000005998	si:dkey-33c12.4	64	35.610	Ictalurus_punctatus
ENSXMAG00000002598	zgc:123010	78	32.237	ENSKMAG00000006468	-	71	30.023	Kryptolebias_marmoratus
ENSXMAG00000002598	zgc:123010	100	83.269	ENSKMAG00000021350	zgc:123010	100	80.962	Kryptolebias_marmoratus
ENSXMAG00000002598	zgc:123010	52	32.226	ENSLBEG00000017203	-	50	32.776	Labrus_bergylta
ENSXMAG00000002598	zgc:123010	100	79.070	ENSLBEG00000023984	zgc:123010	100	79.070	Labrus_bergylta
ENSXMAG00000002598	zgc:123010	99	50.000	ENSLBEG00000013518	-	100	50.000	Labrus_bergylta
ENSXMAG00000002598	zgc:123010	60	30.769	ENSLBEG00000021088	-	55	31.044	Labrus_bergylta
ENSXMAG00000002598	zgc:123010	85	51.429	ENSLACG00000009001	zgc:123010	80	58.583	Latimeria_chalumnae
ENSXMAG00000002598	zgc:123010	91	32.015	ENSLACG00000004602	-	72	35.036	Latimeria_chalumnae
ENSXMAG00000002598	zgc:123010	89	31.569	ENSLOCG00000001861	-	71	33.262	Lepisosteus_oculatus
ENSXMAG00000002598	zgc:123010	100	57.198	ENSLOCG00000008967	zgc:123010	100	56.214	Lepisosteus_oculatus
ENSXMAG00000002598	zgc:123010	69	59.889	ENSMAMG00000002460	-	86	59.889	Mastacembelus_armatus
ENSXMAG00000002598	zgc:123010	62	33.858	ENSMAMG00000000111	si:dkey-33c12.4	57	33.858	Mastacembelus_armatus
ENSXMAG00000002598	zgc:123010	71	79.396	ENSMAMG00000001145	zgc:123010	87	79.396	Mastacembelus_armatus
ENSXMAG00000002598	zgc:123010	64	56.176	ENSMAMG00000003394	-	91	56.176	Mastacembelus_armatus
ENSXMAG00000002598	zgc:123010	55	30.909	ENSMAMG00000004311	-	54	30.909	Mastacembelus_armatus
ENSXMAG00000002598	zgc:123010	69	59.889	ENSMAMG00000002377	-	82	59.889	Mastacembelus_armatus
ENSXMAG00000002598	zgc:123010	64	57.357	ENSMAMG00000003439	-	90	57.357	Mastacembelus_armatus
ENSXMAG00000002598	zgc:123010	69	56.640	ENSMZEG00005014740	-	91	56.640	Maylandia_zebra
ENSXMAG00000002598	zgc:123010	100	79.151	ENSMZEG00005027733	zgc:123010	100	79.344	Maylandia_zebra
ENSXMAG00000002598	zgc:123010	91	69.851	ENSMMOG00000010544	zgc:123010	100	72.246	Mola_mola
ENSXMAG00000002598	zgc:123010	71	51.194	ENSMMOG00000017955	-	99	47.733	Mola_mola
ENSXMAG00000002598	zgc:123010	100	79.191	ENSMALG00000017698	zgc:123010	100	78.998	Monopterus_albus
ENSXMAG00000002598	zgc:123010	60	32.418	ENSMALG00000002265	si:dkey-33c12.4	60	31.888	Monopterus_albus
ENSXMAG00000002598	zgc:123010	94	68.172	ENSNBRG00000021157	zgc:123010	100	68.172	Neolamprologus_brichardi
ENSXMAG00000002598	zgc:123010	55	40.394	ENSONIG00000007538	-	98	38.077	Oreochromis_niloticus
ENSXMAG00000002598	zgc:123010	94	77.033	ENSONIG00000018353	zgc:123010	100	77.236	Oreochromis_niloticus
ENSXMAG00000002598	zgc:123010	57	57.285	ENSONIG00000000297	-	100	57.285	Oreochromis_niloticus
ENSXMAG00000002598	zgc:123010	60	35.849	ENSONIG00000012263	-	99	36.615	Oreochromis_niloticus
ENSXMAG00000002598	zgc:123010	100	76.211	ENSORLG00000007675	zgc:123010	100	76.421	Oryzias_latipes
ENSXMAG00000002598	zgc:123010	55	30.503	ENSORLG00000029651	si:dkey-33c12.4	60	30.649	Oryzias_latipes
ENSXMAG00000002598	zgc:123010	63	30.130	ENSORLG00020008750	si:dkey-33c12.4	56	30.649	Oryzias_latipes_hni
ENSXMAG00000002598	zgc:123010	100	76.000	ENSORLG00020003457	zgc:123010	100	76.211	Oryzias_latipes_hni
ENSXMAG00000002598	zgc:123010	77	30.159	ENSORLG00015008400	-	58	31.933	Oryzias_latipes_hsok
ENSXMAG00000002598	zgc:123010	100	77.992	ENSORLG00015008373	zgc:123010	100	78.185	Oryzias_latipes_hsok
ENSXMAG00000002598	zgc:123010	100	79.730	ENSOMEG00000003408	zgc:123010	100	79.151	Oryzias_melastigma
ENSXMAG00000002598	zgc:123010	69	63.611	ENSPKIG00000015521	zgc:123010	97	53.244	Paramormyrops_kingsleyae
ENSXMAG00000002598	zgc:123010	88	32.563	ENSPKIG00000011819	-	69	33.260	Paramormyrops_kingsleyae
ENSXMAG00000002598	zgc:123010	81	64.455	ENSPMGG00000020251	zgc:123010	89	66.247	Periophthalmus_magnuspinnatus
ENSXMAG00000002598	zgc:123010	57	45.638	ENSPMAG00000004544	zgc:123010	100	45.638	Petromyzon_marinus
ENSXMAG00000002598	zgc:123010	52	42.213	ENSPMAG00000009352	-	82	42.213	Petromyzon_marinus
ENSXMAG00000002598	zgc:123010	63	31.783	ENSPFOG00000009143	si:dkey-33c12.4	56	31.783	Poecilia_formosa
ENSXMAG00000002598	zgc:123010	52	34.448	ENSPFOG00000017092	-	73	32.768	Poecilia_formosa
ENSXMAG00000002598	zgc:123010	100	98.058	ENSPFOG00000001073	zgc:123010	100	98.058	Poecilia_formosa
ENSXMAG00000002598	zgc:123010	100	98.058	ENSPLAG00000007711	zgc:123010	100	98.058	Poecilia_latipinna
ENSXMAG00000002598	zgc:123010	63	31.783	ENSPLAG00000022537	si:dkey-33c12.4	58	31.783	Poecilia_latipinna
ENSXMAG00000002598	zgc:123010	56	32.432	ENSPMEG00000009905	-	72	33.544	Poecilia_mexicana
ENSXMAG00000002598	zgc:123010	63	31.525	ENSPMEG00000015590	si:dkey-33c12.4	56	31.525	Poecilia_mexicana
ENSXMAG00000002598	zgc:123010	100	97.864	ENSPMEG00000005092	zgc:123010	100	97.864	Poecilia_mexicana
ENSXMAG00000002598	zgc:123010	69	82.254	ENSPREG00000019587	zgc:123010	79	82.254	Poecilia_reticulata
ENSXMAG00000002598	zgc:123010	52	33.651	ENSPREG00000016861	-	75	33.651	Poecilia_reticulata
ENSXMAG00000002598	zgc:123010	52	41.758	ENSPNYG00000001047	-	66	34.568	Pundamilia_nyererei
ENSXMAG00000002598	zgc:123010	100	79.304	ENSPNYG00000007893	zgc:123010	100	79.497	Pundamilia_nyererei
ENSXMAG00000002598	zgc:123010	69	53.581	ENSPNYG00000023304	-	96	49.292	Pundamilia_nyererei
ENSXMAG00000002598	zgc:123010	100	65.583	ENSPNAG00000007579	zgc:123010	100	65.637	Pygocentrus_nattereri
ENSXMAG00000002598	zgc:123010	67	34.987	ENSSFOG00015005186	-	63	35.052	Scleropages_formosus
ENSXMAG00000002598	zgc:123010	100	56.415	ENSSFOG00015021394	zgc:123010	99	55.849	Scleropages_formosus
ENSXMAG00000002598	zgc:123010	60	31.536	ENSSMAG00000008147	si:dkey-33c12.4	57	31.282	Scophthalmus_maximus
ENSXMAG00000002598	zgc:123010	100	80.422	ENSSMAG00000002904	zgc:123010	100	80.230	Scophthalmus_maximus
ENSXMAG00000002598	zgc:123010	71	55.526	ENSSMAG00000021096	-	97	48.936	Scophthalmus_maximus
ENSXMAG00000002598	zgc:123010	99	54.598	ENSSDUG00000014026	-	100	54.023	Seriola_dumerili
ENSXMAG00000002598	zgc:123010	63	32.812	ENSSDUG00000003213	si:dkey-33c12.4	61	32.642	Seriola_dumerili
ENSXMAG00000002598	zgc:123010	100	83.237	ENSSDUG00000008651	zgc:123010	100	83.044	Seriola_dumerili
ENSXMAG00000002598	zgc:123010	55	31.173	ENSSDUG00000010976	-	51	31.847	Seriola_dumerili
ENSXMAG00000002598	zgc:123010	63	32.199	ENSSLDG00000009448	si:dkey-33c12.4	68	30.022	Seriola_lalandi_dorsalis
ENSXMAG00000002598	zgc:123010	100	83.044	ENSSLDG00000019386	zgc:123010	100	82.852	Seriola_lalandi_dorsalis
ENSXMAG00000002598	zgc:123010	60	33.884	ENSSPAG00000022577	-	55	33.421	Stegastes_partitus
ENSXMAG00000002598	zgc:123010	100	83.622	ENSSPAG00000013621	zgc:123010	100	83.430	Stegastes_partitus
ENSXMAG00000002598	zgc:123010	80	36.250	ENSSPAG00000004843	-	58	36.250	Stegastes_partitus
ENSXMAG00000002598	zgc:123010	81	31.266	ENSTRUG00000000057	-	60	35.404	Takifugu_rubripes
ENSXMAG00000002598	zgc:123010	100	68.401	ENSTRUG00000024824	zgc:123010	100	67.245	Takifugu_rubripes
ENSXMAG00000002598	zgc:123010	55	40.690	ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	Takifugu_rubripes
ENSXMAG00000002598	zgc:123010	51	37.917	ENSTNIG00000001154	-	98	37.917	Tetraodon_nigroviridis
ENSXMAG00000002598	zgc:123010	63	35.671	ENSTNIG00000010542	-	99	35.976	Tetraodon_nigroviridis
ENSXMAG00000002598	zgc:123010	63	73.860	ENSTNIG00000001303	zgc:123010	100	73.860	Tetraodon_nigroviridis
ENSXMAG00000002598	zgc:123010	58	53.020	ENSXETG00000033896	-	99	53.020	Xenopus_tropicalis
ENSXMAG00000002598	zgc:123010	70	87.871	ENSXCOG00000012281	zgc:123010	83	88.798	Xiphophorus_couchianus