EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002641 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 26806 bases
Position: chr22:14156574-14183379
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002641	zf-met	PF12874.7	7.4e-21	1	3
ENSXMAP00000002641	zf-met	PF12874.7	7.4e-21	2	3
ENSXMAP00000002641	zf-met	PF12874.7	7.4e-21	3	3
ENSXMAP00000002641	zf-C2H2_jaz	PF12171.8	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002646	-	453	-	ENSXMAP00000002641	150 (aa)	-	M3ZK99

Gene Model

Click here to download ENSXMAG00000002641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002641	zgc:171482	99	69.939	ENSAPOG00000019970	zgc:171482	100	86.777	Acanthochromis_polyacanthus
ENSXMAG00000002641	zgc:171482	78	87.603	ENSACIG00000021512	zgc:171482	90	87.603	Amphilophus_citrinellus
ENSXMAG00000002641	zgc:171482	78	87.603	ENSAOCG00000000751	zgc:171482	88	87.603	Amphiprion_ocellaris
ENSXMAG00000002641	zgc:171482	78	87.603	ENSAPEG00000014154	zgc:171482	86	87.603	Amphiprion_percula
ENSXMAG00000002641	zgc:171482	100	64.706	ENSATEG00000001371	zgc:171482	100	85.950	Anabas_testudineus
ENSXMAG00000002641	zgc:171482	93	75.524	ENSACLG00000010511	zgc:171482	83	87.500	Astatotilapia_calliptera
ENSXMAG00000002641	zgc:171482	100	89.815	ENSAMXG00000002299	zgc:171482	100	86.842	Astyanax_mexicanus
ENSXMAG00000002641	zgc:171482	100	87.013	ENSCSEG00000006509	zgc:171482	100	87.013	Cynoglossus_semilaevis
ENSXMAG00000002641	zgc:171482	100	68.208	ENSCVAG00000013606	zgc:171482	100	88.618	Cyprinodon_variegatus
ENSXMAG00000002641	zgc:171482	99	60.465	ENSDARG00000074415	zgc:171482	95	90.667	Danio_rerio
ENSXMAG00000002641	zgc:171482	99	56.329	ENSELUG00000017517	-	60	78.652	Esox_lucius
ENSXMAG00000002641	zgc:171482	77	83.898	ENSELUG00000021817	zgc:171482	85	84.874	Esox_lucius
ENSXMAG00000002641	zgc:171482	51	61.250	ENSELUG00000021794	-	62	52.577	Esox_lucius
ENSXMAG00000002641	zgc:171482	78	89.256	ENSFHEG00000002233	zgc:171482	100	86.179	Fundulus_heteroclitus
ENSXMAG00000002641	zgc:171482	100	64.072	ENSGMOG00000010508	zgc:171482	100	84.746	Gadus_morhua
ENSXMAG00000002641	zgc:171482	100	91.558	ENSGAFG00000009398	zgc:171482	100	91.558	Gambusia_affinis
ENSXMAG00000002641	zgc:171482	100	86.777	ENSGACG00000007680	zgc:171482	100	86.777	Gasterosteus_aculeatus
ENSXMAG00000002641	zgc:171482	77	87.500	ENSHBUG00000023289	zgc:171482	89	87.500	Haplochromis_burtoni
ENSXMAG00000002641	zgc:171482	78	82.645	ENSHCOG00000018086	zgc:171482	90	82.645	Hippocampus_comes
ENSXMAG00000002641	zgc:171482	51	60.000	ENSIPUG00000000356	-	66	54.082	Ictalurus_punctatus
ENSXMAG00000002641	zgc:171482	81	80.952	ENSIPUG00000000361	zgc:171482	88	81.967	Ictalurus_punctatus
ENSXMAG00000002641	zgc:171482	100	68.902	ENSKMAG00000005077	zgc:171482	86	86.777	Kryptolebias_marmoratus
ENSXMAG00000002641	zgc:171482	78	87.603	ENSLBEG00000023823	zgc:171482	86	87.603	Labrus_bergylta
ENSXMAG00000002641	zgc:171482	100	62.428	ENSLOCG00000008863	zgc:171482	97	82.114	Lepisosteus_oculatus
ENSXMAG00000002641	zgc:171482	78	88.430	ENSMAMG00000001031	zgc:171482	75	88.430	Mastacembelus_armatus
ENSXMAG00000002641	zgc:171482	100	66.864	ENSMZEG00005027721	zgc:171482	100	87.500	Maylandia_zebra
ENSXMAG00000002641	zgc:171482	78	87.603	ENSMMOG00000010523	zgc:171482	92	87.603	Mola_mola
ENSXMAG00000002641	zgc:171482	100	64.000	ENSMALG00000017883	zgc:171482	100	86.777	Monopterus_albus
ENSXMAG00000002641	zgc:171482	75	87.179	ENSNBRG00000021035	zgc:171482	87	87.179	Neolamprologus_brichardi
ENSXMAG00000002641	zgc:171482	99	65.517	ENSONIG00000018365	zgc:171482	98	86.777	Oreochromis_niloticus
ENSXMAG00000002641	zgc:171482	100	64.740	ENSORLG00000007607	zgc:171482	100	88.136	Oryzias_latipes
ENSXMAG00000002641	zgc:171482	100	65.497	ENSORLG00020003563	zgc:171482	100	87.395	Oryzias_latipes_hni
ENSXMAG00000002641	zgc:171482	100	64.740	ENSORLG00015008552	zgc:171482	100	88.136	Oryzias_latipes_hsok
ENSXMAG00000002641	zgc:171482	88	77.941	ENSOMEG00000003526	zgc:171482	83	87.395	Oryzias_melastigma
ENSXMAG00000002641	zgc:171482	71	86.239	ENSPKIG00000016244	zgc:171482	87	80.992	Paramormyrops_kingsleyae
ENSXMAG00000002641	zgc:171482	75	84.483	ENSPKIG00000015911	-	81	84.483	Paramormyrops_kingsleyae
ENSXMAG00000002641	zgc:171482	99	85.950	ENSPMGG00000020230	zgc:171482	100	85.950	Periophthalmus_magnuspinnatus
ENSXMAG00000002641	zgc:171482	99	88.430	ENSPFOG00000001974	zgc:171482	96	88.430	Poecilia_formosa
ENSXMAG00000002641	zgc:171482	100	70.732	ENSPLAG00000003327	zgc:171482	100	88.430	Poecilia_latipinna
ENSXMAG00000002641	zgc:171482	99	87.342	ENSPMEG00000004988	zgc:171482	100	98.291	Poecilia_mexicana
ENSXMAG00000002641	zgc:171482	90	78.417	ENSPREG00000019241	zgc:171482	87	88.430	Poecilia_reticulata
ENSXMAG00000002641	zgc:171482	93	75.524	ENSPNYG00000007773	zgc:171482	83	87.500	Pundamilia_nyererei
ENSXMAG00000002641	zgc:171482	99	84.348	ENSPNAG00000007619	zgc:171482	97	83.761	Pygocentrus_nattereri
ENSXMAG00000002641	zgc:171482	76	80.172	ENSSFOG00015016149	zgc:171482	94	80.172	Scleropages_formosus
ENSXMAG00000002641	zgc:171482	75	85.470	ENSSFOG00015021238	zgc:171482	78	85.470	Scleropages_formosus
ENSXMAG00000002641	zgc:171482	77	87.395	ENSSMAG00000002715	zgc:171482	76	87.395	Scophthalmus_maximus
ENSXMAG00000002641	zgc:171482	78	88.430	ENSSDUG00000008773	zgc:171482	85	88.430	Seriola_dumerili
ENSXMAG00000002641	zgc:171482	78	88.430	ENSSLDG00000019510	zgc:171482	85	88.430	Seriola_lalandi_dorsalis
ENSXMAG00000002641	zgc:171482	77	88.333	ENSSPAG00000013724	zgc:171482	94	88.333	Stegastes_partitus
ENSXMAG00000002641	zgc:171482	75	86.207	ENSTRUG00000005705	zgc:171482	72	82.927	Takifugu_rubripes
ENSXMAG00000002641	zgc:171482	100	51.445	ENSTNIG00000008679	zgc:171482	100	66.393	Tetraodon_nigroviridis
ENSXMAG00000002641	zgc:171482	88	47.959	ENSXETG00000013525	zmat4	72	92.308	Xenopus_tropicalis