EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002658 (Gene tree)
Gene ID: 102218285
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 57122 bases
Position: chr12:6520900-6578021
Accession: 102218285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002657	SRRM_C	PF15230.6	3.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002662	-	2729	XM_005803858	ENSXMAP00000002657	627 (aa)	XP_005803915	M3ZKB5

Gene Model

Click here to download ENSXMAG00000002658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002658	srrm4	99	73.502	ENSAPOG00000010969	srrm4	91	74.306	Acanthochromis_polyacanthus
ENSXMAG00000002658	srrm4	67	74.324	ENSACIG00000002171	srrm4	92	74.324	Amphilophus_citrinellus
ENSXMAG00000002658	srrm4	99	70.440	ENSAOCG00000019891	srrm4	99	72.913	Amphiprion_ocellaris
ENSXMAG00000002658	srrm4	99	68.955	ENSAPEG00000011132	srrm4	90	73.264	Amphiprion_percula
ENSXMAG00000002658	srrm4	84	42.989	ENSAMXG00000038719	srrm4	88	44.712	Astyanax_mexicanus
ENSXMAG00000002658	srrm4	59	49.474	ENSDARG00000086327	srrm4	86	47.925	Danio_rerio
ENSXMAG00000002658	srrm4	60	50.384	ENSELUG00000004986	srrm4	82	53.155	Esox_lucius
ENSXMAG00000002658	srrm4	56	72.779	ENSFHEG00000005091	srrm4	86	72.778	Fundulus_heteroclitus
ENSXMAG00000002658	srrm4	52	53.012	ENSGMOG00000006714	srrm4	88	48.428	Gadus_morhua
ENSXMAG00000002658	srrm4	61	97.222	ENSGAFG00000006706	srrm4	80	97.222	Gambusia_affinis
ENSXMAG00000002658	srrm4	99	71.767	ENSHBUG00000010505	srrm4	99	70.662	Haplochromis_burtoni
ENSXMAG00000002658	srrm4	95	69.167	ENSKMAG00000001873	srrm4	99	71.266	Kryptolebias_marmoratus
ENSXMAG00000002658	srrm4	89	69.964	ENSLBEG00000008471	srrm4	99	69.731	Labrus_bergylta
ENSXMAG00000002658	srrm4	90	71.378	ENSMALG00000001422	srrm4	96	69.314	Monopterus_albus
ENSXMAG00000002658	srrm4	62	81.395	ENSNBRG00000015313	srrm4	77	81.395	Neolamprologus_brichardi
ENSXMAG00000002658	srrm4	100	68.847	ENSONIG00000010552	srrm4	100	72.100	Oreochromis_niloticus
ENSXMAG00000002658	srrm4	99	63.968	ENSOMEG00000012376	srrm4	91	62.435	Oryzias_melastigma
ENSXMAG00000002658	srrm4	71	82.262	ENSPFOG00000014600	srrm4	99	89.665	Poecilia_formosa
ENSXMAG00000002658	srrm4	64	100.000	ENSPLAG00000002006	srrm4	94	79.245	Poecilia_latipinna
ENSXMAG00000002658	srrm4	62	100.000	ENSPMEG00000017802	srrm4	91	79.245	Poecilia_mexicana
ENSXMAG00000002658	srrm4	61	97.143	ENSPNYG00000007785	srrm4	81	97.143	Pundamilia_nyererei
ENSXMAG00000002658	srrm4	84	45.880	ENSPNAG00000010426	srrm4	86	45.216	Pygocentrus_nattereri
ENSXMAG00000002658	srrm4	62	97.436	ENSSDUG00000017519	srrm4	73	97.436	Seriola_dumerili
ENSXMAG00000002658	srrm4	64	85.106	ENSSLDG00000015130	srrm4	86	97.436	Seriola_lalandi_dorsalis
ENSXMAG00000002658	srrm4	76	63.018	ENSSPAG00000016190	srrm4	98	70.115	Stegastes_partitus