EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002707 (Gene tree)
Gene ID: 102225346
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 23164 bases
Position: chr2:10308220-10331383
Accession: 102225346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028227	ResIII	PF04851.15	6.4e-07	1	1
ENSXMAP00000002776	ResIII	PF04851.15	7.1e-07	1	1
ENSXMAP00000033651	ResIII	PF04851.15	7.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002781	-	7309	XM_014468498	ENSXMAP00000002776	1812 (aa)	XP_014323984	M3ZKN4
ENSXMAT00000024364	-	5289	-	ENSXMAP00000033651	1762 (aa)	-	-
ENSXMAT00000022973	-	7183	XM_023352478	ENSXMAP00000028227	1770 (aa)	XP_023208246	UPI000C6CB2C3

Gene Model

Click here to download ENSXMAG00000002707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002707	chd2	100	72.097	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSXMAG00000002707	chd2	100	92.212	ENSAPOG00000008913	chd2	100	92.156	Acanthochromis_polyacanthus
ENSXMAG00000002707	chd2	64	75.809	ENSAMEG00000010805	-	94	77.707	Ailuropoda_melanoleuca
ENSXMAG00000002707	chd2	100	88.656	ENSAOCG00000016332	chd2	100	88.436	Amphiprion_ocellaris
ENSXMAG00000002707	chd2	100	91.991	ENSAPEG00000016676	chd2	100	91.822	Amphiprion_percula
ENSXMAG00000002707	chd2	100	91.554	ENSATEG00000005246	chd2	100	91.385	Anabas_testudineus
ENSXMAG00000002707	chd2	100	71.044	ENSAPLG00000011141	-	96	72.060	Anas_platyrhynchos
ENSXMAG00000002707	chd2	98	69.428	ENSACAG00000000088	-	96	69.269	Anolis_carolinensis
ENSXMAG00000002707	chd2	100	72.028	ENSANAG00000024017	-	96	72.987	Aotus_nancymaae
ENSXMAG00000002707	chd2	98	87.903	ENSACLG00000021370	chd2	97	90.588	Astatotilapia_calliptera
ENSXMAG00000002707	chd2	100	71.920	ENSCJAG00000020444	-	96	72.875	Callithrix_jacchus
ENSXMAG00000002707	chd2	99	72.111	ENSCAFG00000010998	CHD2	95	76.546	Canis_familiaris
ENSXMAG00000002707	chd2	99	70.496	ENSCHIG00000022261	-	96	71.524	Capra_hircus
ENSXMAG00000002707	chd2	100	72.512	ENSTSYG00000003272	-	95	74.790	Carlito_syrichta
ENSXMAG00000002707	chd2	93	75.082	ENSCPOG00000005800	-	96	77.198	Cavia_porcellus
ENSXMAG00000002707	chd2	100	72.082	ENSCCAG00000035304	-	96	73.043	Cebus_capucinus
ENSXMAG00000002707	chd2	100	71.989	ENSCATG00000031069	-	96	72.890	Cercocebus_atys
ENSXMAG00000002707	chd2	100	71.452	ENSCLAG00000016269	-	99	70.833	Chinchilla_lanigera
ENSXMAG00000002707	chd2	100	72.043	ENSCSAG00000017007	-	96	72.946	Chlorocebus_sabaeus
ENSXMAG00000002707	chd2	73	81.258	ENSCHOG00000000608	-	76	81.337	Choloepus_hoffmanni
ENSXMAG00000002707	chd2	82	76.148	ENSCPBG00000018049	-	95	81.477	Chrysemys_picta_bellii
ENSXMAG00000002707	chd2	77	52.852	ENSCSAVG00000007580	-	94	57.482	Ciona_savignyi
ENSXMAG00000002707	chd2	100	71.989	ENSCANG00000038126	-	96	72.890	Colobus_angolensis_palliatus
ENSXMAG00000002707	chd2	100	72.282	ENSCGRG00001006649	Chd2	96	72.885	Cricetulus_griseus_chok1gshd
ENSXMAG00000002707	chd2	100	72.282	ENSCGRG00000018154	Chd2	96	72.885	Cricetulus_griseus_crigri
ENSXMAG00000002707	chd2	97	90.722	ENSCSEG00000003646	chd2	94	91.765	Cynoglossus_semilaevis
ENSXMAG00000002707	chd2	98	94.393	ENSCVAG00000002427	chd2	96	94.444	Cyprinodon_variegatus
ENSXMAG00000002707	chd2	100	80.960	ENSDARG00000060687	chd2	100	82.339	Danio_rerio
ENSXMAG00000002707	chd2	99	72.288	ENSDNOG00000009796	-	96	72.935	Dasypus_novemcinctus
ENSXMAG00000002707	chd2	52	76.087	ENSEBUG00000014994	chd2	79	76.087	Eptatretus_burgeri
ENSXMAG00000002707	chd2	99	72.421	ENSEASG00005015526	-	97	79.245	Equus_asinus_asinus
ENSXMAG00000002707	chd2	94	100.000	ENSELUG00000017981	chd2	96	96.552	Esox_lucius
ENSXMAG00000002707	chd2	100	71.974	ENSFALG00000010369	-	97	72.971	Ficedula_albicollis
ENSXMAG00000002707	chd2	100	71.613	ENSFDAG00000020651	-	96	72.778	Fukomys_damarensis
ENSXMAG00000002707	chd2	96	95.000	ENSFHEG00000002119	chd2	100	95.000	Fundulus_heteroclitus
ENSXMAG00000002707	chd2	95	83.353	ENSGMOG00000002890	chd2	99	82.541	Gadus_morhua
ENSXMAG00000002707	chd2	100	71.122	ENSGALG00000006949	CHD2	96	72.098	Gallus_gallus
ENSXMAG00000002707	chd2	99	95.460	ENSGAFG00000001905	chd2	100	95.460	Gambusia_affinis
ENSXMAG00000002707	chd2	95	87.290	ENSGACG00000013246	chd2	99	87.115	Gasterosteus_aculeatus
ENSXMAG00000002707	chd2	81	78.317	ENSGAGG00000013176	-	97	86.022	Gopherus_agassizii
ENSXMAG00000002707	chd2	100	71.060	ENSGGOG00000015677	CHD2	95	74.474	Gorilla_gorilla
ENSXMAG00000002707	chd2	100	91.625	ENSHBUG00000017947	chd2	100	91.570	Haplochromis_burtoni
ENSXMAG00000002707	chd2	100	71.559	ENSHGLG00000004435	CHD2	96	72.666	Heterocephalus_glaber_female
ENSXMAG00000002707	chd2	100	71.129	ENSHGLG00100016376	-	96	72.219	Heterocephalus_glaber_male
ENSXMAG00000002707	chd2	99	80.497	ENSHCOG00000008855	chd2	99	79.819	Hippocampus_comes
ENSXMAG00000002707	chd2	98	76.590	ENSIPUG00000000488	chd2	99	77.465	Ictalurus_punctatus
ENSXMAG00000002707	chd2	100	72.210	ENSSTOG00000001270	-	96	73.058	Ictidomys_tridecemlineatus
ENSXMAG00000002707	chd2	100	71.574	ENSJJAG00000000213	Chd2	96	72.778	Jaculus_jaculus
ENSXMAG00000002707	chd2	85	89.410	ENSKMAG00000015849	chd2	99	89.879	Kryptolebias_marmoratus
ENSXMAG00000002707	chd2	77	74.288	ENSLAFG00000016885	-	98	81.315	Loxodonta_africana
ENSXMAG00000002707	chd2	100	72.043	ENSMFAG00000033343	-	96	72.946	Macaca_fascicularis
ENSXMAG00000002707	chd2	100	72.043	ENSMMUG00000011782	-	96	72.946	Macaca_mulatta
ENSXMAG00000002707	chd2	100	71.805	ENSMNEG00000036875	-	96	72.697	Macaca_nemestrina
ENSXMAG00000002707	chd2	100	72.043	ENSMLEG00000035026	-	96	72.946	Mandrillus_leucophaeus
ENSXMAG00000002707	chd2	100	90.720	ENSMAMG00000009082	chd2	100	90.495	Mastacembelus_armatus
ENSXMAG00000002707	chd2	98	87.903	ENSMZEG00005021333	chd2	97	90.588	Maylandia_zebra
ENSXMAG00000002707	chd2	99	71.134	ENSMGAG00000008966	-	97	72.098	Meleagris_gallopavo
ENSXMAG00000002707	chd2	100	71.167	ENSMICG00000000332	-	96	72.315	Microcebus_murinus
ENSXMAG00000002707	chd2	100	72.097	ENSMOCG00000015124	Chd2	96	72.890	Microtus_ochrogaster
ENSXMAG00000002707	chd2	100	72.810	ENSMODG00000013158	-	100	72.186	Monodelphis_domestica
ENSXMAG00000002707	chd2	98	88.539	ENSMALG00000007755	chd2	99	88.111	Monopterus_albus
ENSXMAG00000002707	chd2	100	72.213	MGP_CAROLIEiJ_G0029860	Chd2	96	72.926	Mus_caroli
ENSXMAG00000002707	chd2	100	72.013	ENSMUSG00000078671	Chd2	96	73.053	Mus_musculus
ENSXMAG00000002707	chd2	100	72.321	MGP_PahariEiJ_G0013082	Chd2	96	72.982	Mus_pahari
ENSXMAG00000002707	chd2	100	72.282	MGP_SPRETEiJ_G0030962	Chd2	96	72.997	Mus_spretus
ENSXMAG00000002707	chd2	100	72.142	ENSMPUG00000017577	-	96	72.987	Mustela_putorius_furo
ENSXMAG00000002707	chd2	100	71.360	ENSMLUG00000009292	-	96	72.087	Myotis_lucifugus
ENSXMAG00000002707	chd2	100	72.243	ENSNGAG00000010792	Chd2	96	72.819	Nannospalax_galili
ENSXMAG00000002707	chd2	98	89.863	ENSNBRG00000020591	chd2	99	89.748	Neolamprologus_brichardi
ENSXMAG00000002707	chd2	100	70.215	ENSNLEG00000012349	-	95	72.591	Nomascus_leucogenys
ENSXMAG00000002707	chd2	72	78.289	ENSMEUG00000001522	-	70	78.289	Notamacropus_eugenii
ENSXMAG00000002707	chd2	100	70.804	ENSODEG00000016028	-	96	71.996	Octodon_degus
ENSXMAG00000002707	chd2	100	91.405	ENSONIG00000015136	chd2	100	91.350	Oreochromis_niloticus
ENSXMAG00000002707	chd2	88	69.415	ENSOANG00000004385	-	99	69.389	Ornithorhynchus_anatinus
ENSXMAG00000002707	chd2	100	67.045	ENSOCUG00000001628	-	93	78.425	Oryctolagus_cuniculus
ENSXMAG00000002707	chd2	100	89.364	ENSORLG00000008403	chd2	100	87.957	Oryzias_latipes
ENSXMAG00000002707	chd2	100	89.048	ENSORLG00020004138	chd2	100	87.727	Oryzias_latipes_hni
ENSXMAG00000002707	chd2	98	89.815	ENSOMEG00000005831	chd2	100	80.572	Oryzias_melastigma
ENSXMAG00000002707	chd2	100	70.323	ENSOGAG00000010399	-	96	71.045	Otolemur_garnettii
ENSXMAG00000002707	chd2	100	72.692	ENSOARG00000010343	-	93	79.245	Ovis_aries
ENSXMAG00000002707	chd2	100	71.141	ENSPPAG00000030381	-	91	79.245	Pan_paniscus
ENSXMAG00000002707	chd2	100	72.043	ENSPTRG00000007478	CHD2	96	72.946	Pan_troglodytes
ENSXMAG00000002707	chd2	100	69.409	ENSPANG00000033355	-	96	70.207	Papio_anubis
ENSXMAG00000002707	chd2	100	80.898	ENSPKIG00000000495	chd2	100	81.117	Paramormyrops_kingsleyae
ENSXMAG00000002707	chd2	85	84.813	ENSPMGG00000009941	chd2	99	84.813	Periophthalmus_magnuspinnatus
ENSXMAG00000002707	chd2	100	72.121	ENSPEMG00000019507	Chd2	96	72.941	Peromyscus_maniculatus_bairdii
ENSXMAG00000002707	chd2	93	74.039	ENSPCIG00000009417	-	99	76.721	Phascolarctos_cinereus
ENSXMAG00000002707	chd2	100	98.290	ENSPFOG00000007050	chd2	100	98.290	Poecilia_formosa
ENSXMAG00000002707	chd2	100	98.400	ENSPLAG00000005067	chd2	100	98.400	Poecilia_latipinna
ENSXMAG00000002707	chd2	100	98.419	ENSPMEG00000019628	chd2	100	98.419	Poecilia_mexicana
ENSXMAG00000002707	chd2	100	70.806	ENSPPYG00000006799	-	96	71.660	Pongo_abelii
ENSXMAG00000002707	chd2	100	72.312	ENSPCOG00000028084	-	96	72.946	Propithecus_coquereli
ENSXMAG00000002707	chd2	98	88.069	ENSPNYG00000010273	chd2	97	90.588	Pundamilia_nyererei
ENSXMAG00000002707	chd2	99	77.321	ENSPNAG00000016719	chd2	74	82.238	Pygocentrus_nattereri
ENSXMAG00000002707	chd2	100	72.336	ENSRNOG00000012716	Chd2	96	72.997	Rattus_norvegicus
ENSXMAG00000002707	chd2	100	70.522	ENSRBIG00000036875	-	96	71.365	Rhinopithecus_bieti
ENSXMAG00000002707	chd2	100	72.043	ENSRROG00000041087	-	96	72.946	Rhinopithecus_roxellana
ENSXMAG00000002707	chd2	100	72.028	ENSSBOG00000023754	-	96	72.987	Saimiri_boliviensis_boliviensis
ENSXMAG00000002707	chd2	100	72.893	ENSSHAG00000012513	-	100	71.949	Sarcophilus_harrisii
ENSXMAG00000002707	chd2	100	81.878	ENSSFOG00015023759	chd2	100	81.659	Scleropages_formosus
ENSXMAG00000002707	chd2	100	89.830	ENSSMAG00000001726	chd2	99	90.588	Scophthalmus_maximus
ENSXMAG00000002707	chd2	98	90.017	ENSSLDG00000001146	chd2	98	92.941	Seriola_lalandi_dorsalis
ENSXMAG00000002707	chd2	76	81.667	ENSSARG00000014112	-	75	81.667	Sorex_araneus
ENSXMAG00000002707	chd2	99	69.409	ENSSPUG00000011266	-	92	81.132	Sphenodon_punctatus
ENSXMAG00000002707	chd2	98	90.201	ENSSPAG00000016452	chd2	99	89.908	Stegastes_partitus
ENSXMAG00000002707	chd2	100	72.234	ENSSSCG00000002266	-	100	74.937	Sus_scrofa
ENSXMAG00000002707	chd2	100	71.692	ENSTGUG00000008540	-	99	71.295	Taeniopygia_guttata
ENSXMAG00000002707	chd2	88	84.029	ENSTRUG00000008842	chd2	87	87.963	Takifugu_rubripes
ENSXMAG00000002707	chd2	87	88.450	ENSTNIG00000010760	chd2	96	88.409	Tetraodon_nigroviridis
ENSXMAG00000002707	chd2	73	72.247	ENSTBEG00000017730	-	74	72.247	Tupaia_belangeri
ENSXMAG00000002707	chd2	90	74.534	ENSTTRG00000000430	-	90	74.598	Tursiops_truncatus
ENSXMAG00000002707	chd2	100	70.652	ENSUMAG00000000083	-	96	71.549	Ursus_maritimus
ENSXMAG00000002707	chd2	84	87.161	ENSVPAG00000009645	-	82	86.980	Vicugna_pacos
ENSXMAG00000002707	chd2	92	67.319	ENSXETG00000024129	chd2	71	77.148	Xenopus_tropicalis
ENSXMAG00000002707	chd2	98	97.158	ENSXCOG00000020255	chd2	100	97.158	Xiphophorus_couchianus