EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002750 (Gene tree)
Gene ID: 102233038
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9449 bases
Position: chr8:594709-604157
Accession: 102233038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002749	PRP4	PF08799.11	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002754	-	1392	XM_023338302	ENSXMAP00000002749	463 (aa)	XP_023194070	M3ZKK7

Gene Model

Click here to download ENSXMAG00000002750's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002750	prpf4	98	65.606	ENSG00000136875	PRPF4	88	64.629	Homo_sapiens
ENSXMAG00000002750	prpf4	94	76.605	ENSAPOG00000014132	prpf4	95	76.559	Acanthochromis_polyacanthus
ENSXMAG00000002750	prpf4	98	65.408	ENSAMEG00000013048	PRPF4	85	64.410	Ailuropoda_melanoleuca
ENSXMAG00000002750	prpf4	100	78.039	ENSACIG00000005579	prpf4	91	76.559	Amphilophus_citrinellus
ENSXMAG00000002750	prpf4	100	83.544	ENSAOCG00000005457	prpf4	100	83.544	Amphiprion_ocellaris
ENSXMAG00000002750	prpf4	100	77.647	ENSAPEG00000000776	prpf4	91	76.774	Amphiprion_percula
ENSXMAG00000002750	prpf4	100	78.039	ENSATEG00000023013	prpf4	91	77.204	Anabas_testudineus
ENSXMAG00000002750	prpf4	99	65.286	ENSAPLG00000006534	PRPF4	86	64.502	Anas_platyrhynchos
ENSXMAG00000002750	prpf4	99	63.851	ENSACAG00000015110	PRPF4	88	62.716	Anolis_carolinensis
ENSXMAG00000002750	prpf4	98	65.408	ENSANAG00000022464	PRPF4	84	64.410	Aotus_nancymaae
ENSXMAG00000002750	prpf4	100	79.216	ENSACLG00000019031	prpf4	91	77.849	Astatotilapia_calliptera
ENSXMAG00000002750	prpf4	99	68.607	ENSAMXG00000006756	prpf4	100	68.399	Astyanax_mexicanus
ENSXMAG00000002750	prpf4	98	65.408	ENSBTAG00000004571	PRPF4	88	64.410	Bos_taurus
ENSXMAG00000002750	prpf4	92	38.316	WBGene00007972	prp-4	82	38.795	Caenorhabditis_elegans
ENSXMAG00000002750	prpf4	98	65.408	ENSCJAG00000017856	PRPF4	87	64.410	Callithrix_jacchus
ENSXMAG00000002750	prpf4	98	65.408	ENSCAFG00000003224	PRPF4	85	64.410	Canis_familiaris
ENSXMAG00000002750	prpf4	98	65.408	ENSCAFG00020022637	PRPF4	88	64.410	Canis_lupus_dingo
ENSXMAG00000002750	prpf4	98	65.408	ENSCHIG00000024648	-	87	64.629	Capra_hircus
ENSXMAG00000002750	prpf4	98	65.408	ENSTSYG00000010366	PRPF4	88	64.410	Carlito_syrichta
ENSXMAG00000002750	prpf4	84	60.406	ENSCAPG00000008935	PRPF4	91	60.406	Cavia_aperea
ENSXMAG00000002750	prpf4	98	61.431	ENSCPOG00000014729	-	89	61.790	Cavia_porcellus
ENSXMAG00000002750	prpf4	98	65.209	ENSCPOG00000010747	-	88	64.410	Cavia_porcellus
ENSXMAG00000002750	prpf4	98	65.209	ENSCCAG00000028990	PRPF4	88	64.192	Cebus_capucinus
ENSXMAG00000002750	prpf4	98	65.408	ENSCATG00000021552	PRPF4	88	64.410	Cercocebus_atys
ENSXMAG00000002750	prpf4	98	65.408	ENSCLAG00000013448	PRPF4	88	64.847	Chinchilla_lanigera
ENSXMAG00000002750	prpf4	87	63.938	ENSCHOG00000007233	PRPF4	90	63.145	Choloepus_hoffmanni
ENSXMAG00000002750	prpf4	99	65.226	ENSCPBG00000019136	PRPF4	68	64.732	Chrysemys_picta_bellii
ENSXMAG00000002750	prpf4	96	53.012	ENSCING00000001299	-	84	53.162	Ciona_intestinalis
ENSXMAG00000002750	prpf4	99	51.473	ENSCSAVG00000009178	-	90	50.827	Ciona_savignyi
ENSXMAG00000002750	prpf4	98	65.408	ENSCANG00000003246	PRPF4	88	64.410	Colobus_angolensis_palliatus
ENSXMAG00000002750	prpf4	98	67.901	ENSCGRG00001016992	Prpf4	96	67.901	Cricetulus_griseus_chok1gshd
ENSXMAG00000002750	prpf4	98	67.901	ENSCGRG00000017560	Prpf4	96	67.901	Cricetulus_griseus_crigri
ENSXMAG00000002750	prpf4	100	73.529	ENSCSEG00000020451	prpf4	91	71.398	Cynoglossus_semilaevis
ENSXMAG00000002750	prpf4	99	68.762	ENSDARG00000067639	prpf4	91	66.379	Danio_rerio
ENSXMAG00000002750	prpf4	98	65.209	ENSDNOG00000013203	PRPF4	87	64.410	Dasypus_novemcinctus
ENSXMAG00000002750	prpf4	98	65.606	ENSDORG00000026275	Prpf4	88	64.629	Dipodomys_ordii
ENSXMAG00000002750	prpf4	93	46.154	FBgn0036733	U4-U6-60K	99	43.053	Drosophila_melanogaster
ENSXMAG00000002750	prpf4	98	65.606	ENSETEG00000020389	PRPF4	87	64.783	Echinops_telfairi
ENSXMAG00000002750	prpf4	99	57.174	ENSEBUG00000015229	prpf4	84	57.826	Eptatretus_burgeri
ENSXMAG00000002750	prpf4	98	65.408	ENSEASG00005022678	PRPF4	88	64.410	Equus_asinus_asinus
ENSXMAG00000002750	prpf4	98	65.408	ENSECAG00000007072	PRPF4	88	64.410	Equus_caballus
ENSXMAG00000002750	prpf4	77	63.559	ENSEEUG00000007480	PRPF4	95	50.688	Erinaceus_europaeus
ENSXMAG00000002750	prpf4	99	68.369	ENSELUG00000007510	prpf4	91	65.733	Esox_lucius
ENSXMAG00000002750	prpf4	98	65.408	ENSFCAG00000005514	PRPF4	87	64.410	Felis_catus
ENSXMAG00000002750	prpf4	94	65.909	ENSFALG00000005423	PRPF4	85	65.455	Ficedula_albicollis
ENSXMAG00000002750	prpf4	98	65.209	ENSFDAG00000005839	PRPF4	88	64.629	Fukomys_damarensis
ENSXMAG00000002750	prpf4	100	79.142	ENSFHEG00000001300	prpf4	91	78.495	Fundulus_heteroclitus
ENSXMAG00000002750	prpf4	99	65.089	ENSGALG00000008857	PRPF4	86	64.286	Gallus_gallus
ENSXMAG00000002750	prpf4	71	98.480	ENSGAFG00000012164	prpf4	68	98.480	Gambusia_affinis
ENSXMAG00000002750	prpf4	100	67.829	ENSGACG00000015476	prpf4	91	65.812	Gasterosteus_aculeatus
ENSXMAG00000002750	prpf4	99	65.422	ENSGAGG00000025029	PRPF4	86	64.224	Gopherus_agassizii
ENSXMAG00000002750	prpf4	98	65.606	ENSGGOG00000006943	PRPF4	88	64.629	Gorilla_gorilla
ENSXMAG00000002750	prpf4	100	79.412	ENSHBUG00000000562	prpf4	96	78.065	Haplochromis_burtoni
ENSXMAG00000002750	prpf4	95	60.738	ENSHGLG00000016628	-	95	61.171	Heterocephalus_glaber_female
ENSXMAG00000002750	prpf4	98	58.691	ENSHGLG00000003838	-	96	58.691	Heterocephalus_glaber_female
ENSXMAG00000002750	prpf4	98	67.556	ENSHGLG00000015191	PRPF4	96	67.556	Heterocephalus_glaber_female
ENSXMAG00000002750	prpf4	98	58.691	ENSHGLG00100005571	-	96	58.691	Heterocephalus_glaber_male
ENSXMAG00000002750	prpf4	99	66.798	ENSIPUG00000017956	PRPF4	91	64.871	Ictalurus_punctatus
ENSXMAG00000002750	prpf4	98	68.257	ENSSTOG00000027833	PRPF4	96	68.257	Ictidomys_tridecemlineatus
ENSXMAG00000002750	prpf4	98	67.828	ENSJJAG00000008838	Prpf4	96	67.828	Jaculus_jaculus
ENSXMAG00000002750	prpf4	100	77.583	ENSKMAG00000013236	prpf4	91	76.344	Kryptolebias_marmoratus
ENSXMAG00000002750	prpf4	100	77.255	ENSLBEG00000020611	prpf4	91	75.484	Labrus_bergylta
ENSXMAG00000002750	prpf4	100	60.352	ENSLACG00000016317	PRPF4	97	59.529	Latimeria_chalumnae
ENSXMAG00000002750	prpf4	100	69.608	ENSLOCG00000000581	prpf4	99	67.312	Lepisosteus_oculatus
ENSXMAG00000002750	prpf4	98	65.408	ENSLAFG00000018225	PRPF4	87	64.410	Loxodonta_africana
ENSXMAG00000002750	prpf4	98	65.805	ENSMFAG00000039397	PRPF4	88	64.192	Macaca_fascicularis
ENSXMAG00000002750	prpf4	98	69.118	ENSMMUG00000005844	PRPF4	96	69.118	Macaca_mulatta
ENSXMAG00000002750	prpf4	98	56.859	ENSMNEG00000033737	PRPF4	86	55.022	Macaca_nemestrina
ENSXMAG00000002750	prpf4	98	65.408	ENSMLEG00000040284	PRPF4	88	64.410	Mandrillus_leucophaeus
ENSXMAG00000002750	prpf4	100	76.863	ENSMAMG00000020141	prpf4	91	75.699	Mastacembelus_armatus
ENSXMAG00000002750	prpf4	100	79.216	ENSMZEG00005023205	prpf4	91	77.849	Maylandia_zebra
ENSXMAG00000002750	prpf4	99	64.497	ENSMGAG00000001796	PRPF4	86	63.636	Meleagris_gallopavo
ENSXMAG00000002750	prpf4	98	65.408	ENSMAUG00000018022	Prpf4	88	64.410	Mesocricetus_auratus
ENSXMAG00000002750	prpf4	98	65.209	ENSMICG00000015022	PRPF4	87	64.410	Microcebus_murinus
ENSXMAG00000002750	prpf4	98	65.408	ENSMOCG00000018273	Prpf4	88	64.410	Microtus_ochrogaster
ENSXMAG00000002750	prpf4	100	76.125	ENSMMOG00000021177	prpf4	91	73.978	Mola_mola
ENSXMAG00000002750	prpf4	99	63.511	ENSMODG00000025096	-	85	62.338	Monodelphis_domestica
ENSXMAG00000002750	prpf4	99	63.511	ENSMODG00000004444	-	88	62.771	Monodelphis_domestica
ENSXMAG00000002750	prpf4	100	77.843	ENSMALG00000013624	prpf4	91	76.559	Monopterus_albus
ENSXMAG00000002750	prpf4	98	65.408	MGP_CAROLIEiJ_G0026078	Prpf4	88	64.410	Mus_caroli
ENSXMAG00000002750	prpf4	98	65.408	ENSMUSG00000066148	Prpf4	88	64.410	Mus_musculus
ENSXMAG00000002750	prpf4	98	65.606	MGP_PahariEiJ_G0028413	Prpf4	88	64.629	Mus_pahari
ENSXMAG00000002750	prpf4	98	65.408	MGP_SPRETEiJ_G0027042	Prpf4	88	64.410	Mus_spretus
ENSXMAG00000002750	prpf4	98	65.408	ENSMPUG00000007883	PRPF4	88	64.410	Mustela_putorius_furo
ENSXMAG00000002750	prpf4	98	64.215	ENSMLUG00000008626	-	85	63.537	Myotis_lucifugus
ENSXMAG00000002750	prpf4	98	65.010	ENSMLUG00000015309	-	85	64.192	Myotis_lucifugus
ENSXMAG00000002750	prpf4	98	64.905	ENSNGAG00000000468	Prpf4	96	64.905	Nannospalax_galili
ENSXMAG00000002750	prpf4	100	79.216	ENSNBRG00000007972	prpf4	91	77.849	Neolamprologus_brichardi
ENSXMAG00000002750	prpf4	98	65.408	ENSNLEG00000016647	PRPF4	88	64.410	Nomascus_leucogenys
ENSXMAG00000002750	prpf4	99	64.103	ENSMEUG00000013256	PRPF4	89	62.987	Notamacropus_eugenii
ENSXMAG00000002750	prpf4	98	65.941	ENSOPRG00000005302	PRPF4	87	64.629	Ochotona_princeps
ENSXMAG00000002750	prpf4	98	65.209	ENSODEG00000018147	PRPF4	88	64.629	Octodon_degus
ENSXMAG00000002750	prpf4	100	79.216	ENSONIG00000012671	prpf4	91	78.065	Oreochromis_niloticus
ENSXMAG00000002750	prpf4	98	65.606	ENSOCUG00000005046	PRPF4	88	64.629	Oryctolagus_cuniculus
ENSXMAG00000002750	prpf4	100	75.049	ENSORLG00000019641	prpf4	91	73.118	Oryzias_latipes
ENSXMAG00000002750	prpf4	100	75.049	ENSORLG00020019438	prpf4	91	73.118	Oryzias_latipes_hni
ENSXMAG00000002750	prpf4	100	74.803	ENSOMEG00000020941	prpf4	96	73.763	Oryzias_melastigma
ENSXMAG00000002750	prpf4	98	61.034	ENSOGAG00000007802	PRPF4	94	58.268	Otolemur_garnettii
ENSXMAG00000002750	prpf4	98	65.408	ENSOARG00000006319	PRPF4	85	64.629	Ovis_aries
ENSXMAG00000002750	prpf4	98	65.606	ENSPPAG00000041797	PRPF4	88	64.629	Pan_paniscus
ENSXMAG00000002750	prpf4	98	65.408	ENSPPRG00000014360	PRPF4	88	64.410	Panthera_pardus
ENSXMAG00000002750	prpf4	98	65.408	ENSPTIG00000009574	PRPF4	88	64.410	Panthera_tigris_altaica
ENSXMAG00000002750	prpf4	98	65.606	ENSPTRG00000021274	PRPF4	87	64.629	Pan_troglodytes
ENSXMAG00000002750	prpf4	98	65.408	ENSPANG00000025776	PRPF4	84	64.410	Papio_anubis
ENSXMAG00000002750	prpf4	100	70.196	ENSPKIG00000017259	prpf4	91	68.387	Paramormyrops_kingsleyae
ENSXMAG00000002750	prpf4	99	65.226	ENSPSIG00000010713	PRPF4	81	64.224	Pelodiscus_sinensis
ENSXMAG00000002750	prpf4	100	58.594	ENSPMGG00000000997	prpf4	98	59.449	Periophthalmus_magnuspinnatus
ENSXMAG00000002750	prpf4	98	65.408	ENSPEMG00000024115	Prpf4	88	64.410	Peromyscus_maniculatus_bairdii
ENSXMAG00000002750	prpf4	99	63.905	ENSPCIG00000003821	PRPF4	89	62.771	Phascolarctos_cinereus
ENSXMAG00000002750	prpf4	100	78.252	ENSPFOG00000013524	prpf4	99	96.960	Poecilia_formosa
ENSXMAG00000002750	prpf4	70	95.692	ENSPLAG00000011620	prpf4	97	95.666	Poecilia_latipinna
ENSXMAG00000002750	prpf4	99	97.050	ENSPMEG00000006813	prpf4	100	97.050	Poecilia_mexicana
ENSXMAG00000002750	prpf4	98	65.010	ENSPCAG00000002561	PRPF4	89	63.974	Procavia_capensis
ENSXMAG00000002750	prpf4	98	65.010	ENSPCOG00000011975	PRPF4	88	64.192	Propithecus_coquereli
ENSXMAG00000002750	prpf4	98	62.227	ENSPVAG00000004708	PRPF4	87	60.917	Pteropus_vampyrus
ENSXMAG00000002750	prpf4	100	79.412	ENSPNYG00000008013	prpf4	91	78.065	Pundamilia_nyererei
ENSXMAG00000002750	prpf4	99	66.798	ENSPNAG00000000697	prpf4	91	64.440	Pygocentrus_nattereri
ENSXMAG00000002750	prpf4	98	65.408	ENSRNOG00000014777	Prpf4	88	64.629	Rattus_norvegicus
ENSXMAG00000002750	prpf4	98	65.408	ENSRBIG00000040221	PRPF4	88	64.410	Rhinopithecus_bieti
ENSXMAG00000002750	prpf4	98	65.408	ENSRROG00000040240	PRPF4	88	64.410	Rhinopithecus_roxellana
ENSXMAG00000002750	prpf4	99	63.905	ENSSHAG00000017658	PRPF4	88	62.771	Sarcophilus_harrisii
ENSXMAG00000002750	prpf4	99	68.369	ENSSFOG00015008963	prpf4	91	67.026	Scleropages_formosus
ENSXMAG00000002750	prpf4	100	76.998	ENSSMAG00000008889	prpf4	91	75.699	Scophthalmus_maximus
ENSXMAG00000002750	prpf4	94	77.226	ENSSDUG00000022083	prpf4	90	77.204	Seriola_dumerili
ENSXMAG00000002750	prpf4	94	77.019	ENSSLDG00000008115	prpf4	90	76.989	Seriola_lalandi_dorsalis
ENSXMAG00000002750	prpf4	99	64.694	ENSSPUG00000015582	PRPF4	88	63.853	Sphenodon_punctatus
ENSXMAG00000002750	prpf4	100	71.735	ENSSPAG00000011286	prpf4	91	70.064	Stegastes_partitus
ENSXMAG00000002750	prpf4	98	65.408	ENSSSCG00000024648	PRPF4	88	64.410	Sus_scrofa
ENSXMAG00000002750	prpf4	97	66.263	ENSTGUG00000002623	PRPF4	91	65.247	Taeniopygia_guttata
ENSXMAG00000002750	prpf4	100	73.922	ENSTRUG00000008853	prpf4	91	72.258	Takifugu_rubripes
ENSXMAG00000002750	prpf4	100	74.510	ENSTNIG00000013250	prpf4	91	72.473	Tetraodon_nigroviridis
ENSXMAG00000002750	prpf4	98	57.853	ENSTBEG00000000821	PRPF4	96	56.332	Tupaia_belangeri
ENSXMAG00000002750	prpf4	78	83.607	ENSTTRG00000003246	PRPF4	79	83.607	Tursiops_truncatus
ENSXMAG00000002750	prpf4	76	66.382	ENSUAMG00000018288	PRPF4	94	66.382	Ursus_americanus
ENSXMAG00000002750	prpf4	98	64.811	ENSUMAG00000019375	PRPF4	87	63.755	Ursus_maritimus
ENSXMAG00000002750	prpf4	98	65.010	ENSVPAG00000005281	PRPF4	87	64.192	Vicugna_pacos
ENSXMAG00000002750	prpf4	98	64.694	ENSVVUG00000002476	PRPF4	91	63.636	Vulpes_vulpes
ENSXMAG00000002750	prpf4	77	89.916	ENSXCOG00000006101	prpf4	93	88.889	Xiphophorus_couchianus