EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002846 (Gene tree)
Gene ID: 102218001
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 13524 bases
Position: chr2:10095333-10108856
Accession: 102218001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000040101	MMR_HSR1	PF01926.23	1.7e-07	1	1
ENSXMAP00000002862	MMR_HSR1	PF01926.23	3.1e-07	1	1
ENSXMAP00000036508	MMR_HSR1	PF01926.23	3.2e-07	1	1
ENSXMAP00000031203	MMR_HSR1	PF01926.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002867	-	2944	-	ENSXMAP00000002862	605 (aa)	-	M3ZKX0
ENSXMAT00000025617	-	3097	XM_023325157	ENSXMAP00000036508	656 (aa)	XP_023180925	UPI000C6E24D7
ENSXMAT00000020941	-	2944	-	ENSXMAP00000040101	605 (aa)	-	-
ENSXMAT00000031367	-	3003	XM_023325133	ENSXMAP00000031203	693 (aa)	XP_023180901	UPI000C6CCA01

Gene Model

Click here to download ENSXMAG00000002846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002846	zgc:162879	99	73.708	ENSAPOG00000008539	zgc:162879	99	73.708	Acanthochromis_polyacanthus
ENSXMAG00000002846	zgc:162879	100	75.529	ENSACIG00000023717	zgc:162879	100	75.529	Amphilophus_citrinellus
ENSXMAG00000002846	zgc:162879	87	69.019	ENSAOCG00000006210	zgc:162879	90	69.019	Amphiprion_ocellaris
ENSXMAG00000002846	zgc:162879	99	74.620	ENSAPEG00000017489	zgc:162879	99	74.620	Amphiprion_percula
ENSXMAG00000002846	zgc:162879	100	75.753	ENSATEG00000006102	zgc:162879	100	75.753	Anabas_testudineus
ENSXMAG00000002846	zgc:162879	100	72.590	ENSACLG00000021066	zgc:162879	100	72.054	Astatotilapia_calliptera
ENSXMAG00000002846	zgc:162879	100	58.902	ENSAMXG00000007430	zgc:162879	100	58.902	Astyanax_mexicanus
ENSXMAG00000002846	zgc:162879	99	50.567	ENSCSEG00000013699	zgc:162879	92	62.136	Cynoglossus_semilaevis
ENSXMAG00000002846	zgc:162879	99	80.365	ENSCVAG00000014510	zgc:162879	99	80.428	Cyprinodon_variegatus
ENSXMAG00000002846	zgc:162879	100	58.859	ENSDARG00000074163	zgc:162879	100	58.859	Danio_rerio
ENSXMAG00000002846	zgc:162879	99	55.195	ENSELUG00000019483	zgc:162879	97	60.297	Esox_lucius
ENSXMAG00000002846	zgc:162879	83	75.944	ENSFHEG00000022549	zgc:162879	100	75.944	Fundulus_heteroclitus
ENSXMAG00000002846	zgc:162879	100	95.427	ENSGAFG00000001313	zgc:162879	100	95.427	Gambusia_affinis
ENSXMAG00000002846	zgc:162879	99	69.536	ENSGACG00000010798	zgc:162879	99	67.977	Gasterosteus_aculeatus
ENSXMAG00000002846	zgc:162879	100	72.632	ENSHBUG00000016335	zgc:162879	100	72.632	Haplochromis_burtoni
ENSXMAG00000002846	zgc:162879	91	55.298	ENSHCOG00000012026	zgc:162879	99	55.648	Hippocampus_comes
ENSXMAG00000002846	zgc:162879	100	67.823	ENSKMAG00000016246	zgc:162879	100	68.297	Kryptolebias_marmoratus
ENSXMAG00000002846	zgc:162879	99	69.578	ENSLBEG00000006690	zgc:162879	100	69.578	Labrus_bergylta
ENSXMAG00000002846	zgc:162879	99	54.341	ENSLACG00000014082	-	99	41.927	Latimeria_chalumnae
ENSXMAG00000002846	zgc:162879	99	55.126	ENSLOCG00000014347	zgc:162879	98	55.224	Lepisosteus_oculatus
ENSXMAG00000002846	zgc:162879	100	70.348	ENSMAMG00000008875	zgc:162879	100	69.894	Mastacembelus_armatus
ENSXMAG00000002846	zgc:162879	100	72.440	ENSMZEG00005022256	zgc:162879	100	72.440	Maylandia_zebra
ENSXMAG00000002846	zgc:162879	100	66.934	ENSNBRG00000020110	zgc:162879	100	66.934	Neolamprologus_brichardi
ENSXMAG00000002846	zgc:162879	99	75.758	ENSONIG00000015165	zgc:162879	100	69.429	Oreochromis_niloticus
ENSXMAG00000002846	zgc:162879	99	63.982	ENSORLG00015017960	zgc:162879	99	63.982	Oryzias_latipes_hsok
ENSXMAG00000002846	zgc:162879	100	55.167	ENSPKIG00000020661	zgc:162879	100	55.167	Paramormyrops_kingsleyae
ENSXMAG00000002846	zgc:162879	100	92.683	ENSPFOG00000006354	zgc:162879	99	92.683	Poecilia_formosa
ENSXMAG00000002846	zgc:162879	100	92.530	ENSPLAG00000020643	zgc:162879	99	92.530	Poecilia_latipinna
ENSXMAG00000002846	zgc:162879	100	92.397	ENSPMEG00000014713	zgc:162879	100	92.073	Poecilia_mexicana
ENSXMAG00000002846	zgc:162879	100	65.909	ENSPNYG00000010530	zgc:162879	100	65.909	Pundamilia_nyererei
ENSXMAG00000002846	zgc:162879	100	58.098	ENSPNAG00000012022	zgc:162879	100	58.098	Pygocentrus_nattereri
ENSXMAG00000002846	zgc:162879	88	47.595	ENSSFOG00015023774	zgc:162879	95	47.595	Scleropages_formosus
ENSXMAG00000002846	zgc:162879	100	70.802	ENSSMAG00000001513	zgc:162879	99	71.770	Scophthalmus_maximus
ENSXMAG00000002846	zgc:162879	100	76.054	ENSSDUG00000011478	zgc:162879	100	76.054	Seriola_dumerili
ENSXMAG00000002846	zgc:162879	100	75.904	ENSSLDG00000000877	zgc:162879	100	75.904	Seriola_lalandi_dorsalis
ENSXMAG00000002846	zgc:162879	99	68.140	ENSSPAG00000010598	zgc:162879	99	68.140	Stegastes_partitus
ENSXMAG00000002846	zgc:162879	99	68.015	ENSTNIG00000019239	zgc:162879	99	63.778	Tetraodon_nigroviridis
ENSXMAG00000002846	zgc:162879	99	39.390	ENSXETG00000015491	rasef	99	39.340	Xenopus_tropicalis
ENSXMAG00000002846	zgc:162879	83	89.683	ENSXCOG00000020244	zgc:162879	100	89.683	Xiphophorus_couchianus