EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002855 (Gene tree)
Gene ID: 102228137
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3872 bases
Position: chr17:1879050-1882921
Accession: 102228137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002866	RtcB	PF01139.17	1.1e-146	1	1
ENSXMAP00000029546	RtcB	PF01139.17	1.2e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000033537	-	1548	-	ENSXMAP00000029546	515 (aa)	-	-
ENSXMAT00000002871	-	1518	XM_005809692	ENSXMAP00000002866	505 (aa)	XP_005809749	M3ZKX4

Gene Model

Click here to download ENSXMAG00000002855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002855	rtcb	100	94.851	ENSG00000100220	RTCB	100	94.851	Homo_sapiens
ENSXMAG00000002855	rtcb	100	97.426	ENSAPOG00000006040	rtcb	100	97.426	Acanthochromis_polyacanthus
ENSXMAG00000002855	rtcb	100	94.851	ENSAMEG00000016152	RTCB	100	94.851	Ailuropoda_melanoleuca
ENSXMAG00000002855	rtcb	100	92.475	ENSACIG00000009083	rtcb	100	92.475	Amphilophus_citrinellus
ENSXMAG00000002855	rtcb	100	97.426	ENSAOCG00000005662	rtcb	100	98.696	Amphiprion_ocellaris
ENSXMAG00000002855	rtcb	96	93.018	ENSAPEG00000024653	rtcb	100	93.018	Amphiprion_percula
ENSXMAG00000002855	rtcb	100	97.426	ENSAPEG00000024701	rtcb	100	97.426	Amphiprion_percula
ENSXMAG00000002855	rtcb	100	97.426	ENSATEG00000000618	rtcb	100	97.426	Anabas_testudineus
ENSXMAG00000002855	rtcb	100	91.329	ENSACAG00000014817	RTCB	100	91.329	Anolis_carolinensis
ENSXMAG00000002855	rtcb	100	80.594	ENSANAG00000018191	-	91	80.594	Aotus_nancymaae
ENSXMAG00000002855	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSXMAG00000002855	rtcb	100	96.040	ENSACLG00000008367	rtcb	100	96.739	Astatotilapia_calliptera
ENSXMAG00000002855	rtcb	100	95.050	ENSAMXG00000042320	rtcb	100	95.050	Astyanax_mexicanus
ENSXMAG00000002855	rtcb	100	95.050	ENSBTAG00000011070	RTCB	100	95.050	Bos_taurus
ENSXMAG00000002855	rtcb	100	74.455	WBGene00008877	rtcb-1	100	74.455	Caenorhabditis_elegans
ENSXMAG00000002855	rtcb	100	95.050	ENSCJAG00000006128	RTCB	100	95.050	Callithrix_jacchus
ENSXMAG00000002855	rtcb	100	94.851	ENSCAFG00000001785	RTCB	100	94.851	Canis_familiaris
ENSXMAG00000002855	rtcb	100	90.891	ENSCAFG00000010789	-	100	90.891	Canis_familiaris
ENSXMAG00000002855	rtcb	100	94.851	ENSCAFG00020004890	-	100	94.851	Canis_lupus_dingo
ENSXMAG00000002855	rtcb	87	90.909	ENSCAFG00020018953	-	99	90.909	Canis_lupus_dingo
ENSXMAG00000002855	rtcb	100	95.050	ENSCHIG00000027009	-	100	95.050	Capra_hircus
ENSXMAG00000002855	rtcb	100	94.851	ENSTSYG00000012320	RTCB	100	94.851	Carlito_syrichta
ENSXMAG00000002855	rtcb	94	94.969	ENSCAPG00000011647	RTCB	96	95.378	Cavia_aperea
ENSXMAG00000002855	rtcb	100	95.050	ENSCCAG00000000618	RTCB	100	95.050	Cebus_capucinus
ENSXMAG00000002855	rtcb	100	94.653	ENSCATG00000033424	RTCB	100	94.653	Cercocebus_atys
ENSXMAG00000002855	rtcb	100	94.851	ENSCLAG00000007997	RTCB	100	94.851	Chinchilla_lanigera
ENSXMAG00000002855	rtcb	100	94.851	ENSCSAG00000008351	RTCB	100	94.851	Chlorocebus_sabaeus
ENSXMAG00000002855	rtcb	100	81.386	ENSCHOG00000009123	RTCB	100	81.386	Choloepus_hoffmanni
ENSXMAG00000002855	rtcb	100	93.465	ENSCPBG00000023184	RTCB	100	93.465	Chrysemys_picta_bellii
ENSXMAG00000002855	rtcb	100	82.772	ENSCING00000003830	-	100	82.772	Ciona_intestinalis
ENSXMAG00000002855	rtcb	100	82.970	ENSCSAVG00000008124	-	99	82.970	Ciona_savignyi
ENSXMAG00000002855	rtcb	100	90.891	ENSCANG00000001891	RTCB	100	90.891	Colobus_angolensis_palliatus
ENSXMAG00000002855	rtcb	100	94.455	ENSCGRG00001011173	Rtcb	100	94.455	Cricetulus_griseus_chok1gshd
ENSXMAG00000002855	rtcb	99	90.258	ENSCGRG00000009587	-	96	95.541	Cricetulus_griseus_crigri
ENSXMAG00000002855	rtcb	100	96.238	ENSCSEG00000003986	rtcb	100	96.238	Cynoglossus_semilaevis
ENSXMAG00000002855	rtcb	82	97.356	ENSCVAG00000000569	rtcb	95	97.356	Cyprinodon_variegatus
ENSXMAG00000002855	rtcb	100	95.644	ENSDARG00000101047	rtcb	100	95.644	Danio_rerio
ENSXMAG00000002855	rtcb	80	91.400	ENSDNOG00000012425	RTCB	99	91.400	Dasypus_novemcinctus
ENSXMAG00000002855	rtcb	100	94.059	ENSDORG00000010855	Rtcb	100	94.059	Dipodomys_ordii
ENSXMAG00000002855	rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSXMAG00000002855	rtcb	100	89.109	ENSETEG00000001988	RTCB	100	89.109	Echinops_telfairi
ENSXMAG00000002855	rtcb	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSXMAG00000002855	rtcb	100	94.653	ENSEASG00005019059	RTCB	100	94.653	Equus_asinus_asinus
ENSXMAG00000002855	rtcb	100	94.653	ENSECAG00000023998	RTCB	100	94.653	Equus_caballus
ENSXMAG00000002855	rtcb	89	86.130	ENSEEUG00000006251	RTCB	100	86.130	Erinaceus_europaeus
ENSXMAG00000002855	rtcb	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSXMAG00000002855	rtcb	100	94.851	ENSFCAG00000026480	RTCB	100	94.851	Felis_catus
ENSXMAG00000002855	rtcb	100	94.257	ENSFALG00000013334	RTCB	100	94.257	Ficedula_albicollis
ENSXMAG00000002855	rtcb	100	94.653	ENSFDAG00000018150	RTCB	100	94.653	Fukomys_damarensis
ENSXMAG00000002855	rtcb	100	98.020	ENSFHEG00000009595	rtcb	100	98.020	Fundulus_heteroclitus
ENSXMAG00000002855	rtcb	100	92.277	ENSGMOG00000018882	rtcb	100	92.277	Gadus_morhua
ENSXMAG00000002855	rtcb	100	94.059	ENSGALG00000012611	RTCB	100	94.059	Gallus_gallus
ENSXMAG00000002855	rtcb	100	99.208	ENSGAFG00000004198	rtcb	100	99.208	Gambusia_affinis
ENSXMAG00000002855	rtcb	100	95.050	ENSGACG00000000586	rtcb	100	95.050	Gasterosteus_aculeatus
ENSXMAG00000002855	rtcb	93	92.979	ENSGAGG00000019133	RTCB	98	92.979	Gopherus_agassizii
ENSXMAG00000002855	rtcb	100	94.851	ENSGGOG00000011402	RTCB	100	94.851	Gorilla_gorilla
ENSXMAG00000002855	rtcb	100	96.040	ENSHBUG00000020571	rtcb	100	96.040	Haplochromis_burtoni
ENSXMAG00000002855	rtcb	93	67.797	ENSHGLG00000001066	-	99	67.797	Heterocephalus_glaber_female
ENSXMAG00000002855	rtcb	100	94.653	ENSHGLG00000004492	RTCB	100	94.653	Heterocephalus_glaber_female
ENSXMAG00000002855	rtcb	100	94.653	ENSHGLG00100008965	RTCB	100	94.653	Heterocephalus_glaber_male
ENSXMAG00000002855	rtcb	100	93.886	ENSHCOG00000006450	rtcb	100	93.886	Hippocampus_comes
ENSXMAG00000002855	rtcb	100	94.851	ENSIPUG00000015443	rtcb	100	94.851	Ictalurus_punctatus
ENSXMAG00000002855	rtcb	100	94.851	ENSSTOG00000003878	RTCB	100	94.851	Ictidomys_tridecemlineatus
ENSXMAG00000002855	rtcb	100	94.455	ENSJJAG00000010667	Rtcb	100	94.455	Jaculus_jaculus
ENSXMAG00000002855	rtcb	100	97.228	ENSKMAG00000013178	rtcb	100	97.228	Kryptolebias_marmoratus
ENSXMAG00000002855	rtcb	100	96.436	ENSLBEG00000010566	RTCB	100	96.436	Labrus_bergylta
ENSXMAG00000002855	rtcb	100	95.248	ENSLBEG00000000214	rtcb	100	95.248	Labrus_bergylta
ENSXMAG00000002855	rtcb	100	94.257	ENSLACG00000013033	RTCB	100	94.257	Latimeria_chalumnae
ENSXMAG00000002855	rtcb	100	95.050	ENSLOCG00000016515	rtcb	99	95.050	Lepisosteus_oculatus
ENSXMAG00000002855	rtcb	100	94.455	ENSLAFG00000002082	RTCB	100	94.455	Loxodonta_africana
ENSXMAG00000002855	rtcb	100	94.851	ENSMFAG00000034419	RTCB	100	94.851	Macaca_fascicularis
ENSXMAG00000002855	rtcb	100	94.851	ENSMMUG00000006720	RTCB	100	94.851	Macaca_mulatta
ENSXMAG00000002855	rtcb	100	94.851	ENSMNEG00000040669	RTCB	100	94.851	Macaca_nemestrina
ENSXMAG00000002855	rtcb	100	94.653	ENSMLEG00000040505	RTCB	100	94.653	Mandrillus_leucophaeus
ENSXMAG00000002855	rtcb	100	97.426	ENSMAMG00000020676	rtcb	100	97.426	Mastacembelus_armatus
ENSXMAG00000002855	rtcb	100	96.040	ENSMZEG00005018942	rtcb	100	96.040	Maylandia_zebra
ENSXMAG00000002855	rtcb	100	93.688	ENSMGAG00000012805	RTCB	100	93.688	Meleagris_gallopavo
ENSXMAG00000002855	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSXMAG00000002855	rtcb	100	95.050	ENSMICG00000013303	-	100	95.050	Microcebus_murinus
ENSXMAG00000002855	rtcb	100	75.446	ENSMICG00000036677	-	100	75.446	Microcebus_murinus
ENSXMAG00000002855	rtcb	100	94.455	ENSMOCG00000002440	Rtcb	100	94.455	Microtus_ochrogaster
ENSXMAG00000002855	rtcb	100	96.832	ENSMMOG00000005987	rtcb	100	96.832	Mola_mola
ENSXMAG00000002855	rtcb	100	94.257	ENSMODG00000001414	RTCB	100	94.257	Monodelphis_domestica
ENSXMAG00000002855	rtcb	100	97.228	ENSMALG00000007603	rtcb	100	97.228	Monopterus_albus
ENSXMAG00000002855	rtcb	100	94.851	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.851	Mus_caroli
ENSXMAG00000002855	rtcb	100	94.851	ENSMUSG00000001783	Rtcb	100	94.851	Mus_musculus
ENSXMAG00000002855	rtcb	100	94.851	MGP_PahariEiJ_G0031396	Rtcb	100	94.851	Mus_pahari
ENSXMAG00000002855	rtcb	100	94.851	MGP_SPRETEiJ_G0016507	Rtcb	100	94.851	Mus_spretus
ENSXMAG00000002855	rtcb	100	94.851	ENSMPUG00000012285	RTCB	100	94.851	Mustela_putorius_furo
ENSXMAG00000002855	rtcb	100	92.308	ENSMLUG00000007803	RTCB	100	92.308	Myotis_lucifugus
ENSXMAG00000002855	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSXMAG00000002855	rtcb	100	96.238	ENSNBRG00000017202	rtcb	100	96.238	Neolamprologus_brichardi
ENSXMAG00000002855	rtcb	100	94.851	ENSNLEG00000004960	RTCB	100	94.851	Nomascus_leucogenys
ENSXMAG00000002855	rtcb	88	99.107	ENSMEUG00000007809	-	88	99.107	Notamacropus_eugenii
ENSXMAG00000002855	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSXMAG00000002855	rtcb	100	62.970	ENSODEG00000005042	-	100	62.970	Octodon_degus
ENSXMAG00000002855	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSXMAG00000002855	rtcb	100	96.832	ENSONIG00000007474	rtcb	100	96.832	Oreochromis_niloticus
ENSXMAG00000002855	rtcb	100	93.861	ENSOANG00000005524	RTCB	100	93.861	Ornithorhynchus_anatinus
ENSXMAG00000002855	rtcb	93	94.468	ENSOCUG00000008270	RTCB	96	94.468	Oryctolagus_cuniculus
ENSXMAG00000002855	rtcb	100	96.832	ENSORLG00000020093	rtcb	100	96.832	Oryzias_latipes
ENSXMAG00000002855	rtcb	100	96.832	ENSORLG00020003706	rtcb	100	96.832	Oryzias_latipes_hni
ENSXMAG00000002855	rtcb	100	97.030	ENSORLG00015002968	rtcb	100	97.030	Oryzias_latipes_hsok
ENSXMAG00000002855	rtcb	100	96.436	ENSOMEG00000021278	rtcb	100	96.436	Oryzias_melastigma
ENSXMAG00000002855	rtcb	100	94.455	ENSOGAG00000001425	RTCB	100	94.455	Otolemur_garnettii
ENSXMAG00000002855	rtcb	100	95.050	ENSOARG00000018008	RTCB	100	95.050	Ovis_aries
ENSXMAG00000002855	rtcb	100	94.851	ENSPPAG00000028667	RTCB	100	94.851	Pan_paniscus
ENSXMAG00000002855	rtcb	100	94.851	ENSPPRG00000004038	RTCB	100	94.851	Panthera_pardus
ENSXMAG00000002855	rtcb	94	91.158	ENSPTIG00000020499	RTCB	97	92.211	Panthera_tigris_altaica
ENSXMAG00000002855	rtcb	100	94.851	ENSPTRG00000014287	RTCB	100	94.851	Pan_troglodytes
ENSXMAG00000002855	rtcb	100	94.851	ENSPANG00000016035	RTCB	100	94.851	Papio_anubis
ENSXMAG00000002855	rtcb	100	94.257	ENSPKIG00000001881	rtcb	100	94.257	Paramormyrops_kingsleyae
ENSXMAG00000002855	rtcb	91	94.783	ENSPSIG00000011690	RTCB	100	94.783	Pelodiscus_sinensis
ENSXMAG00000002855	rtcb	100	96.238	ENSPMGG00000016672	rtcb	100	96.238	Periophthalmus_magnuspinnatus
ENSXMAG00000002855	rtcb	100	94.851	ENSPEMG00000019548	Rtcb	100	94.851	Peromyscus_maniculatus_bairdii
ENSXMAG00000002855	rtcb	100	91.287	ENSPMAG00000005657	rtcb	100	91.287	Petromyzon_marinus
ENSXMAG00000002855	rtcb	100	94.257	ENSPCIG00000009467	RTCB	100	94.257	Phascolarctos_cinereus
ENSXMAG00000002855	rtcb	100	99.604	ENSPFOG00000003058	rtcb	100	99.604	Poecilia_formosa
ENSXMAG00000002855	rtcb	100	99.406	ENSPLAG00000017663	rtcb	100	99.406	Poecilia_latipinna
ENSXMAG00000002855	rtcb	100	99.604	ENSPMEG00000006227	rtcb	100	99.604	Poecilia_mexicana
ENSXMAG00000002855	rtcb	100	99.208	ENSPREG00000018467	rtcb	100	99.208	Poecilia_reticulata
ENSXMAG00000002855	rtcb	100	94.851	ENSPPYG00000011752	RTCB	100	94.851	Pongo_abelii
ENSXMAG00000002855	rtcb	93	78.178	ENSPCAG00000013641	RTCB	100	78.178	Procavia_capensis
ENSXMAG00000002855	rtcb	100	95.050	ENSPCOG00000017243	RTCB	100	95.050	Propithecus_coquereli
ENSXMAG00000002855	rtcb	93	94.043	ENSPVAG00000002380	RTCB	100	94.043	Pteropus_vampyrus
ENSXMAG00000002855	rtcb	100	96.040	ENSPNYG00000022760	rtcb	100	96.040	Pundamilia_nyererei
ENSXMAG00000002855	rtcb	100	95.644	ENSPNAG00000009209	rtcb	100	95.644	Pygocentrus_nattereri
ENSXMAG00000002855	rtcb	100	94.851	ENSRNOG00000004813	Rtcb	100	94.851	Rattus_norvegicus
ENSXMAG00000002855	rtcb	100	86.561	ENSRBIG00000042090	RTCB	100	86.561	Rhinopithecus_bieti
ENSXMAG00000002855	rtcb	100	90.297	ENSSBOG00000020085	-	100	90.297	Saimiri_boliviensis_boliviensis
ENSXMAG00000002855	rtcb	94	95.781	ENSSHAG00000016277	RTCB	100	95.781	Sarcophilus_harrisii
ENSXMAG00000002855	rtcb	100	93.465	ENSSFOG00015011572	RTCB	100	93.465	Scleropages_formosus
ENSXMAG00000002855	rtcb	100	95.050	ENSSFOG00015000763	rtcb	100	95.050	Scleropages_formosus
ENSXMAG00000002855	rtcb	100	92.871	ENSSMAG00000005096	rtcb	100	92.871	Scophthalmus_maximus
ENSXMAG00000002855	rtcb	100	95.842	ENSSDUG00000012605	rtcb	100	95.842	Seriola_dumerili
ENSXMAG00000002855	rtcb	100	95.842	ENSSLDG00000019458	rtcb	100	95.842	Seriola_lalandi_dorsalis
ENSXMAG00000002855	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSXMAG00000002855	rtcb	100	93.861	ENSSPUG00000012814	RTCB	100	93.861	Sphenodon_punctatus
ENSXMAG00000002855	rtcb	100	97.426	ENSSPAG00000004623	rtcb	100	97.426	Stegastes_partitus
ENSXMAG00000002855	rtcb	100	94.851	ENSSSCG00000000158	RTCB	100	94.851	Sus_scrofa
ENSXMAG00000002855	rtcb	100	94.257	ENSTGUG00000010947	RTCB	99	94.257	Taeniopygia_guttata
ENSXMAG00000002855	rtcb	91	97.391	ENSTRUG00000009880	rtcb	100	97.391	Takifugu_rubripes
ENSXMAG00000002855	rtcb	100	94.653	ENSTNIG00000002484	rtcb	100	94.653	Tetraodon_nigroviridis
ENSXMAG00000002855	rtcb	100	81.584	ENSTBEG00000004418	RTCB	100	81.584	Tupaia_belangeri
ENSXMAG00000002855	rtcb	93	94.043	ENSTTRG00000006417	RTCB	100	94.043	Tursiops_truncatus
ENSXMAG00000002855	rtcb	100	94.851	ENSUAMG00000022792	RTCB	100	94.851	Ursus_americanus
ENSXMAG00000002855	rtcb	100	94.851	ENSUMAG00000017225	RTCB	100	94.851	Ursus_maritimus
ENSXMAG00000002855	rtcb	100	94.653	ENSVPAG00000005375	RTCB	100	94.653	Vicugna_pacos
ENSXMAG00000002855	rtcb	100	94.851	ENSVVUG00000023408	RTCB	100	95.332	Vulpes_vulpes
ENSXMAG00000002855	rtcb	100	93.465	ENSXETG00000011523	rtcb	100	93.465	Xenopus_tropicalis