EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002900 (Gene tree)
Gene ID: 102216502
Gene Symbol: cnot6l
Alias: zgc:111987
Full Name: CCR4-NOT transcription complex subunit 6 like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 17588 bases
Position: chr12:5801742-5819329
Accession: 102216502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002920	Exo_endo_phos	PF03372.23	3.6e-19	1	1
ENSXMAP00000023352	Exo_endo_phos	PF03372.23	3.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002925	-	5690	XM_023344023	ENSXMAP00000002920	552 (aa)	XP_023199791	M3ZL28
ENSXMAT00000031616	-	2650	-	ENSXMAP00000023352	552 (aa)	-	UPI000293B54E

Gene Model

Click here to download ENSXMAG00000002900's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002900	cnot6l	100	83.784	ENSG00000138767	CNOT6L	100	89.873	Homo_sapiens
ENSXMAG00000002900	cnot6l	100	95.118	ENSAPOG00000005894	cnot6l	100	95.118	Acanthochromis_polyacanthus
ENSXMAG00000002900	cnot6l	100	83.604	ENSAMEG00000005570	CNOT6L	99	83.964	Ailuropoda_melanoleuca
ENSXMAG00000002900	cnot6l	100	95.479	ENSACIG00000002515	cnot6l	100	95.479	Amphilophus_citrinellus
ENSXMAG00000002900	cnot6l	100	91.682	ENSAOCG00000006705	cnot6l	100	91.682	Amphiprion_ocellaris
ENSXMAG00000002900	cnot6l	100	89.331	ENSAPEG00000020035	cnot6l	100	89.331	Amphiprion_percula
ENSXMAG00000002900	cnot6l	100	95.118	ENSATEG00000008774	cnot6l	100	95.118	Anabas_testudineus
ENSXMAG00000002900	cnot6l	100	82.500	ENSAPLG00000003448	CNOT6L	100	82.857	Anas_platyrhynchos
ENSXMAG00000002900	cnot6l	99	83.906	ENSACAG00000012099	CNOT6L	99	83.906	Anolis_carolinensis
ENSXMAG00000002900	cnot6l	100	83.784	ENSANAG00000023917	CNOT6L	99	84.144	Aotus_nancymaae
ENSXMAG00000002900	cnot6l	100	94.213	ENSACLG00000000879	cnot6l	100	94.213	Astatotilapia_calliptera
ENSXMAG00000002900	cnot6l	100	88.788	ENSAMXG00000008943	cnot6l	98	88.788	Astyanax_mexicanus
ENSXMAG00000002900	cnot6l	100	83.784	ENSBTAG00000049571	CNOT6L	99	84.144	Bos_taurus
ENSXMAG00000002900	cnot6l	100	83.784	ENSCJAG00000014846	CNOT6L	99	84.144	Callithrix_jacchus
ENSXMAG00000002900	cnot6l	100	83.784	ENSCAFG00000008699	CNOT6L	99	84.144	Canis_familiaris
ENSXMAG00000002900	cnot6l	100	83.514	ENSCAFG00020011108	CNOT6L	100	83.877	Canis_lupus_dingo
ENSXMAG00000002900	cnot6l	100	83.784	ENSCHIG00000006297	CNOT6L	99	84.144	Capra_hircus
ENSXMAG00000002900	cnot6l	100	83.784	ENSTSYG00000009068	CNOT6L	100	84.144	Carlito_syrichta
ENSXMAG00000002900	cnot6l	86	89.474	ENSCPOG00000010337	CNOT6L	99	89.474	Cavia_porcellus
ENSXMAG00000002900	cnot6l	100	83.784	ENSCCAG00000025000	CNOT6L	99	84.144	Cebus_capucinus
ENSXMAG00000002900	cnot6l	100	83.784	ENSCATG00000029623	CNOT6L	99	84.144	Cercocebus_atys
ENSXMAG00000002900	cnot6l	100	83.784	ENSCLAG00000004598	CNOT6L	99	83.784	Chinchilla_lanigera
ENSXMAG00000002900	cnot6l	100	83.784	ENSCSAG00000004580	CNOT6L	99	84.144	Chlorocebus_sabaeus
ENSXMAG00000002900	cnot6l	74	73.973	ENSCHOG00000001108	-	58	79.592	Choloepus_hoffmanni
ENSXMAG00000002900	cnot6l	100	83.063	ENSCPBG00000019403	CNOT6L	100	83.423	Chrysemys_picta_bellii
ENSXMAG00000002900	cnot6l	100	83.784	ENSCANG00000028583	CNOT6L	99	84.144	Colobus_angolensis_palliatus
ENSXMAG00000002900	cnot6l	100	82.883	ENSCGRG00001022099	Cnot6l	100	83.243	Cricetulus_griseus_chok1gshd
ENSXMAG00000002900	cnot6l	100	82.162	ENSCGRG00000000543	Cnot6l	100	82.523	Cricetulus_griseus_crigri
ENSXMAG00000002900	cnot6l	75	88.969	ENSCSEG00000010395	-	98	88.969	Cynoglossus_semilaevis
ENSXMAG00000002900	cnot6l	100	90.235	ENSCSEG00000014001	cnot6l	100	90.235	Cynoglossus_semilaevis
ENSXMAG00000002900	cnot6l	97	95.733	ENSCVAG00000021683	cnot6l	96	95.733	Cyprinodon_variegatus
ENSXMAG00000002900	cnot6l	99	89.855	ENSDARG00000054597	cnot6l	98	89.855	Danio_rerio
ENSXMAG00000002900	cnot6l	100	75.492	ENSDNOG00000004229	CNOT6L	99	79.448	Dasypus_novemcinctus
ENSXMAG00000002900	cnot6l	100	75.719	ENSDORG00000011458	Cnot6l	100	75.719	Dipodomys_ordii
ENSXMAG00000002900	cnot6l	100	71.681	ENSEBUG00000004849	cnot6l	100	71.681	Eptatretus_burgeri
ENSXMAG00000002900	cnot6l	87	85.270	ENSEASG00005016429	CNOT6L	91	85.270	Equus_asinus_asinus
ENSXMAG00000002900	cnot6l	94	83.077	ENSECAG00000001582	CNOT6L	87	85.270	Equus_caballus
ENSXMAG00000002900	cnot6l	99	90.399	ENSELUG00000013353	cnot6l	87	90.399	Esox_lucius
ENSXMAG00000002900	cnot6l	100	83.784	ENSFCAG00000008322	CNOT6L	99	84.144	Felis_catus
ENSXMAG00000002900	cnot6l	100	84.116	ENSFALG00000008515	CNOT6L	99	84.296	Ficedula_albicollis
ENSXMAG00000002900	cnot6l	100	83.964	ENSFDAG00000007719	CNOT6L	95	83.964	Fukomys_damarensis
ENSXMAG00000002900	cnot6l	100	87.027	ENSFHEG00000012364	cnot6l	100	87.027	Fundulus_heteroclitus
ENSXMAG00000002900	cnot6l	91	66.206	ENSGMOG00000011077	-	99	66.206	Gadus_morhua
ENSXMAG00000002900	cnot6l	87	80.167	ENSGMOG00000000730	cnot6l	99	80.167	Gadus_morhua
ENSXMAG00000002900	cnot6l	100	83.032	ENSGALG00000010333	CNOT6L	90	83.394	Gallus_gallus
ENSXMAG00000002900	cnot6l	97	97.378	ENSGAFG00000006105	cnot6l	99	97.378	Gambusia_affinis
ENSXMAG00000002900	cnot6l	88	83.469	ENSGAGG00000008605	CNOT6L	94	83.469	Gopherus_agassizii
ENSXMAG00000002900	cnot6l	100	83.784	ENSGGOG00000023412	CNOT6L	98	84.144	Gorilla_gorilla
ENSXMAG00000002900	cnot6l	100	94.394	ENSHBUG00000004755	cnot6l	95	94.792	Haplochromis_burtoni
ENSXMAG00000002900	cnot6l	100	83.964	ENSHGLG00000006452	CNOT6L	100	83.964	Heterocephalus_glaber_female
ENSXMAG00000002900	cnot6l	100	83.964	ENSHGLG00100012384	CNOT6L	98	83.964	Heterocephalus_glaber_male
ENSXMAG00000002900	cnot6l	100	78.819	ENSHCOG00000009512	cnot6l	100	80.560	Hippocampus_comes
ENSXMAG00000002900	cnot6l	100	87.884	ENSIPUG00000009879	cnot6l	100	87.884	Ictalurus_punctatus
ENSXMAG00000002900	cnot6l	100	83.784	ENSSTOG00000015293	CNOT6L	100	84.144	Ictidomys_tridecemlineatus
ENSXMAG00000002900	cnot6l	100	83.243	ENSJJAG00000020583	Cnot6l	99	83.604	Jaculus_jaculus
ENSXMAG00000002900	cnot6l	100	93.671	ENSKMAG00000004165	cnot6l	100	93.671	Kryptolebias_marmoratus
ENSXMAG00000002900	cnot6l	100	91.139	ENSLBEG00000027202	cnot6l	100	91.139	Labrus_bergylta
ENSXMAG00000002900	cnot6l	100	83.243	ENSLACG00000004684	CNOT6L	100	83.243	Latimeria_chalumnae
ENSXMAG00000002900	cnot6l	100	84.810	ENSLOCG00000007420	cnot6l	92	84.810	Lepisosteus_oculatus
ENSXMAG00000002900	cnot6l	100	83.784	ENSLAFG00000011449	CNOT6L	100	82.363	Loxodonta_africana
ENSXMAG00000002900	cnot6l	100	83.784	ENSMFAG00000044296	CNOT6L	99	84.144	Macaca_fascicularis
ENSXMAG00000002900	cnot6l	100	83.784	ENSMMUG00000045609	CNOT6L	98	84.144	Macaca_mulatta
ENSXMAG00000002900	cnot6l	100	83.784	ENSMNEG00000041259	CNOT6L	100	84.144	Macaca_nemestrina
ENSXMAG00000002900	cnot6l	100	83.784	ENSMLEG00000029198	CNOT6L	98	84.144	Mandrillus_leucophaeus
ENSXMAG00000002900	cnot6l	99	94.928	ENSMAMG00000016954	cnot6l	98	94.928	Mastacembelus_armatus
ENSXMAG00000002900	cnot6l	100	94.213	ENSMZEG00005020235	cnot6l	100	94.213	Maylandia_zebra
ENSXMAG00000002900	cnot6l	100	83.032	ENSMGAG00000005144	CNOT6L	99	83.394	Meleagris_gallopavo
ENSXMAG00000002900	cnot6l	100	83.423	ENSMICG00000017026	CNOT6L	99	83.784	Microcebus_murinus
ENSXMAG00000002900	cnot6l	100	82.883	ENSMOCG00000009451	Cnot6l	99	83.243	Microtus_ochrogaster
ENSXMAG00000002900	cnot6l	100	94.033	ENSMMOG00000014621	cnot6l	100	94.033	Mola_mola
ENSXMAG00000002900	cnot6l	100	83.423	ENSMODG00000011744	CNOT6L	75	83.784	Monodelphis_domestica
ENSXMAG00000002900	cnot6l	100	92.780	ENSMALG00000006354	cnot6l	100	94.585	Monopterus_albus
ENSXMAG00000002900	cnot6l	100	82.883	MGP_CAROLIEiJ_G0027429	Cnot6l	99	84.633	Mus_caroli
ENSXMAG00000002900	cnot6l	100	82.883	ENSMUSG00000034724	Cnot6l	99	84.633	Mus_musculus
ENSXMAG00000002900	cnot6l	100	82.883	MGP_PahariEiJ_G0017207	Cnot6l	100	83.243	Mus_pahari
ENSXMAG00000002900	cnot6l	100	82.883	MGP_SPRETEiJ_G0028426	Cnot6l	100	83.243	Mus_spretus
ENSXMAG00000002900	cnot6l	94	80.115	ENSMPUG00000003895	CNOT6L	99	80.497	Mustela_putorius_furo
ENSXMAG00000002900	cnot6l	93	83.044	ENSMLUG00000000936	CNOT6L	100	83.430	Myotis_lucifugus
ENSXMAG00000002900	cnot6l	100	82.703	ENSNGAG00000019803	Cnot6l	100	83.063	Nannospalax_galili
ENSXMAG00000002900	cnot6l	90	92.354	ENSNBRG00000016345	cnot6l	81	91.751	Neolamprologus_brichardi
ENSXMAG00000002900	cnot6l	100	83.784	ENSNLEG00000028820	CNOT6L	99	84.144	Nomascus_leucogenys
ENSXMAG00000002900	cnot6l	80	70.404	ENSMEUG00000009767	-	77	70.655	Notamacropus_eugenii
ENSXMAG00000002900	cnot6l	100	83.964	ENSODEG00000004161	CNOT6L	99	83.964	Octodon_degus
ENSXMAG00000002900	cnot6l	100	93.907	ENSONIG00000013992	cnot6l	97	93.907	Oreochromis_niloticus
ENSXMAG00000002900	cnot6l	100	83.063	ENSOANG00000003561	CNOT6L	100	83.423	Ornithorhynchus_anatinus
ENSXMAG00000002900	cnot6l	100	83.784	ENSOCUG00000002497	CNOT6L	99	84.144	Oryctolagus_cuniculus
ENSXMAG00000002900	cnot6l	100	89.873	ENSORLG00000018874	cnot6l	100	89.873	Oryzias_latipes
ENSXMAG00000002900	cnot6l	100	89.693	ENSOMEG00000010026	cnot6l	100	89.693	Oryzias_melastigma
ENSXMAG00000002900	cnot6l	100	80.536	ENSOGAG00000012122	CNOT6L	100	79.464	Otolemur_garnettii
ENSXMAG00000002900	cnot6l	100	83.784	ENSOARG00000017771	CNOT6L	99	84.144	Ovis_aries
ENSXMAG00000002900	cnot6l	84	89.474	ENSPPAG00000034242	-	98	89.474	Pan_paniscus
ENSXMAG00000002900	cnot6l	100	80.901	ENSPPAG00000030178	-	100	81.261	Pan_paniscus
ENSXMAG00000002900	cnot6l	100	83.784	ENSPPRG00000008857	CNOT6L	99	84.144	Panthera_pardus
ENSXMAG00000002900	cnot6l	100	83.784	ENSPTIG00000015698	CNOT6L	99	84.144	Panthera_tigris_altaica
ENSXMAG00000002900	cnot6l	100	83.784	ENSPTRG00000016198	CNOT6L	99	84.144	Pan_troglodytes
ENSXMAG00000002900	cnot6l	84	89.474	ENSPTRG00000045291	-	99	89.474	Pan_troglodytes
ENSXMAG00000002900	cnot6l	100	83.784	ENSPANG00000007831	CNOT6L	99	84.144	Papio_anubis
ENSXMAG00000002900	cnot6l	100	88.608	ENSPKIG00000002892	cnot6l	100	88.608	Paramormyrops_kingsleyae
ENSXMAG00000002900	cnot6l	100	82.162	ENSPSIG00000016241	CNOT6L	99	82.914	Pelodiscus_sinensis
ENSXMAG00000002900	cnot6l	100	84.657	ENSPMGG00000004021	cnot6l	100	84.657	Periophthalmus_magnuspinnatus
ENSXMAG00000002900	cnot6l	100	82.883	ENSPEMG00000011554	Cnot6l	100	83.243	Peromyscus_maniculatus_bairdii
ENSXMAG00000002900	cnot6l	97	68.739	ENSPMAG00000005706	cnot6l	97	70.545	Petromyzon_marinus
ENSXMAG00000002900	cnot6l	100	82.703	ENSPCIG00000027504	-	100	83.063	Phascolarctos_cinereus
ENSXMAG00000002900	cnot6l	100	98.188	ENSPFOG00000013163	cnot6l	100	98.188	Poecilia_formosa
ENSXMAG00000002900	cnot6l	100	98.188	ENSPLAG00000019862	cnot6l	100	98.188	Poecilia_latipinna
ENSXMAG00000002900	cnot6l	100	98.007	ENSPMEG00000015834	cnot6l	100	98.007	Poecilia_mexicana
ENSXMAG00000002900	cnot6l	100	98.007	ENSPREG00000003561	cnot6l	100	98.007	Poecilia_reticulata
ENSXMAG00000002900	cnot6l	100	83.784	ENSPPYG00000014869	CNOT6L	100	84.144	Pongo_abelii
ENSXMAG00000002900	cnot6l	100	54.414	ENSPCAG00000016617	CNOT6L	81	89.189	Procavia_capensis
ENSXMAG00000002900	cnot6l	100	83.784	ENSPCOG00000014669	CNOT6L	99	84.144	Propithecus_coquereli
ENSXMAG00000002900	cnot6l	83	86.486	ENSPVAG00000002690	CNOT6L	78	86.486	Pteropus_vampyrus
ENSXMAG00000002900	cnot6l	91	92.048	ENSPNYG00000006717	cnot6l	89	94.835	Pundamilia_nyererei
ENSXMAG00000002900	cnot6l	100	88.608	ENSPNAG00000003537	cnot6l	98	88.608	Pygocentrus_nattereri
ENSXMAG00000002900	cnot6l	100	82.883	ENSRNOG00000002075	Cnot6l	100	83.243	Rattus_norvegicus
ENSXMAG00000002900	cnot6l	100	83.784	ENSRBIG00000027644	CNOT6L	99	84.144	Rhinopithecus_bieti
ENSXMAG00000002900	cnot6l	100	83.964	ENSRROG00000031003	CNOT6L	100	84.324	Rhinopithecus_roxellana
ENSXMAG00000002900	cnot6l	100	83.784	ENSSBOG00000028521	CNOT6L	100	84.144	Saimiri_boliviensis_boliviensis
ENSXMAG00000002900	cnot6l	100	83.243	ENSSHAG00000006072	CNOT6L	99	83.604	Sarcophilus_harrisii
ENSXMAG00000002900	cnot6l	100	88.246	ENSSFOG00015019044	cnot6l	100	88.246	Scleropages_formosus
ENSXMAG00000002900	cnot6l	100	90.958	ENSSMAG00000015568	cnot6l	100	90.958	Scophthalmus_maximus
ENSXMAG00000002900	cnot6l	100	94.394	ENSSDUG00000018426	cnot6l	100	94.394	Seriola_dumerili
ENSXMAG00000002900	cnot6l	100	94.213	ENSSLDG00000000335	cnot6l	100	94.213	Seriola_lalandi_dorsalis
ENSXMAG00000002900	cnot6l	100	83.243	ENSSPUG00000002016	CNOT6L	100	83.243	Sphenodon_punctatus
ENSXMAG00000002900	cnot6l	100	95.298	ENSSPAG00000022932	cnot6l	100	95.298	Stegastes_partitus
ENSXMAG00000002900	cnot6l	100	83.604	ENSSSCG00000008989	CNOT6L	100	83.964	Sus_scrofa
ENSXMAG00000002900	cnot6l	100	83.755	ENSTGUG00000001737	-	99	83.935	Taeniopygia_guttata
ENSXMAG00000002900	cnot6l	100	92.948	ENSTRUG00000004332	cnot6l	100	92.948	Takifugu_rubripes
ENSXMAG00000002900	cnot6l	100	91.682	ENSTNIG00000016717	cnot6l	100	91.682	Tetraodon_nigroviridis
ENSXMAG00000002900	cnot6l	87	80.083	ENSTBEG00000016519	CNOT6L	96	80.083	Tupaia_belangeri
ENSXMAG00000002900	cnot6l	87	84.855	ENSTTRG00000005606	CNOT6L	99	84.855	Tursiops_truncatus
ENSXMAG00000002900	cnot6l	100	83.604	ENSUAMG00000026982	CNOT6L	100	83.964	Ursus_americanus
ENSXMAG00000002900	cnot6l	100	83.604	ENSUMAG00000007955	CNOT6L	99	83.964	Ursus_maritimus
ENSXMAG00000002900	cnot6l	100	80.000	ENSVPAG00000010892	CNOT6L	99	80.360	Vicugna_pacos
ENSXMAG00000002900	cnot6l	100	83.784	ENSVVUG00000024858	CNOT6L	100	87.574	Vulpes_vulpes
ENSXMAG00000002900	cnot6l	100	82.883	ENSXETG00000000372	cnot6l	99	82.883	Xenopus_tropicalis