EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002920 (Gene tree)
Gene ID: 102216762
Gene Symbol: mrpl1
Alias: si:dkey-58f10.1
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 12979 bases
Position: chr12:5789956-5802934
Accession: 102216762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022251	Ribosomal_L1	PF00687.21	1.2e-18	1	1
ENSXMAP00000002927	Ribosomal_L1	PF00687.21	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002932	-	1933	XM_023344024	ENSXMAP00000002927	336 (aa)	XP_023199792	M3ZL35
ENSXMAT00000028232	-	2036	-	ENSXMAP00000022251	323 (aa)	-	UPI0003B4CBD0

Gene Model

Click here to download ENSXMAG00000002920's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002920	mrpl1	99	44.444	ENSG00000169288	MRPL1	85	48.980	Homo_sapiens
ENSXMAG00000002920	mrpl1	100	67.802	ENSAPOG00000005831	mrpl1	100	67.183	Acanthochromis_polyacanthus
ENSXMAG00000002920	mrpl1	93	70.861	ENSACIG00000002298	mrpl1	100	69.868	Amphilophus_citrinellus
ENSXMAG00000002920	mrpl1	100	67.802	ENSAOCG00000006715	mrpl1	100	66.873	Amphiprion_ocellaris
ENSXMAG00000002920	mrpl1	100	65.944	ENSAPEG00000020020	mrpl1	100	65.015	Amphiprion_percula
ENSXMAG00000002920	mrpl1	99	70.219	ENSATEG00000008760	mrpl1	99	69.906	Anabas_testudineus
ENSXMAG00000002920	mrpl1	67	54.128	ENSAPLG00000003428	MRPL1	84	52.402	Anas_platyrhynchos
ENSXMAG00000002920	mrpl1	94	46.006	ENSACAG00000012069	MRPL1	59	52.174	Anolis_carolinensis
ENSXMAG00000002920	mrpl1	99	41.049	ENSANAG00000035463	-	73	47.899	Aotus_nancymaae
ENSXMAG00000002920	mrpl1	72	44.017	ENSANAG00000020317	-	75	44.017	Aotus_nancymaae
ENSXMAG00000002920	mrpl1	99	72.671	ENSACLG00000001464	mrpl1	88	71.827	Astatotilapia_calliptera
ENSXMAG00000002920	mrpl1	98	56.156	ENSAMXG00000033077	mrpl1	98	55.255	Astyanax_mexicanus
ENSXMAG00000002920	mrpl1	98	42.769	ENSCPOG00000031686	MRPL1	97	41.640	Cavia_porcellus
ENSXMAG00000002920	mrpl1	98	41.824	ENSCLAG00000005041	MRPL1	98	41.358	Chinchilla_lanigera
ENSXMAG00000002920	mrpl1	99	40.123	ENSCANG00000033966	MRPL1	76	43.478	Colobus_angolensis_palliatus
ENSXMAG00000002920	mrpl1	99	44.545	ENSCGRG00001005376	-	99	44.545	Cricetulus_griseus_chok1gshd
ENSXMAG00000002920	mrpl1	99	44.242	ENSCGRG00000003658	-	99	44.242	Cricetulus_griseus_crigri
ENSXMAG00000002920	mrpl1	98	60.000	ENSCSEG00000014014	mrpl1	99	59.443	Cynoglossus_semilaevis
ENSXMAG00000002920	mrpl1	100	79.567	ENSCVAG00000021636	mrpl1	100	78.328	Cyprinodon_variegatus
ENSXMAG00000002920	mrpl1	98	55.873	ENSDARG00000054606	mrpl1	96	55.873	Danio_rerio
ENSXMAG00000002920	mrpl1	99	46.296	ENSDNOG00000001665	MRPL1	98	46.319	Dasypus_novemcinctus
ENSXMAG00000002920	mrpl1	99	42.593	ENSDORG00000015752	Mrpl1	75	48.031	Dipodomys_ordii
ENSXMAG00000002920	mrpl1	82	39.394	ENSEBUG00000004815	mrpl1	74	40.164	Eptatretus_burgeri
ENSXMAG00000002920	mrpl1	100	61.300	ENSELUG00000013391	mrpl1	99	61.300	Esox_lucius
ENSXMAG00000002920	mrpl1	99	47.095	ENSFCAG00000013776	MRPL1	78	52.174	Felis_catus
ENSXMAG00000002920	mrpl1	87	44.840	ENSFALG00000008527	MRPL1	89	46.429	Ficedula_albicollis
ENSXMAG00000002920	mrpl1	94	41.379	ENSFDAG00000011113	MRPL1	76	47.368	Fukomys_damarensis
ENSXMAG00000002920	mrpl1	100	79.567	ENSFHEG00000012375	mrpl1	100	79.567	Fundulus_heteroclitus
ENSXMAG00000002920	mrpl1	82	47.348	ENSGALG00000010324	MRPL1	71	48.523	Gallus_gallus
ENSXMAG00000002920	mrpl1	100	90.093	ENSGAFG00000006089	mrpl1	88	90.274	Gambusia_affinis
ENSXMAG00000002920	mrpl1	86	53.957	ENSGAGG00000015092	MRPL1	74	57.851	Gopherus_agassizii
ENSXMAG00000002920	mrpl1	78	49.012	ENSGGOG00000001304	MRPL1	78	49.012	Gorilla_gorilla
ENSXMAG00000002920	mrpl1	99	71.429	ENSHBUG00000004985	mrpl1	100	71.429	Haplochromis_burtoni
ENSXMAG00000002920	mrpl1	98	43.533	ENSHGLG00000006127	MRPL1	98	43.210	Heterocephalus_glaber_female
ENSXMAG00000002920	mrpl1	98	43.533	ENSHGLG00100004303	MRPL1	98	43.210	Heterocephalus_glaber_male
ENSXMAG00000002920	mrpl1	76	64.754	ENSIPUG00000009866	mrpl1	84	64.754	Ictalurus_punctatus
ENSXMAG00000002920	mrpl1	78	49.407	ENSSTOG00000001415	MRPL1	79	49.407	Ictidomys_tridecemlineatus
ENSXMAG00000002920	mrpl1	85	48.014	ENSJJAG00000012571	Mrpl1	78	49.603	Jaculus_jaculus
ENSXMAG00000002920	mrpl1	98	69.206	ENSKMAG00000004236	mrpl1	99	67.619	Kryptolebias_marmoratus
ENSXMAG00000002920	mrpl1	91	60.339	ENSLBEG00000013686	-	96	60.000	Labrus_bergylta
ENSXMAG00000002920	mrpl1	88	65.845	ENSLBEG00000017454	-	90	65.493	Labrus_bergylta
ENSXMAG00000002920	mrpl1	97	54.313	ENSLACG00000008208	MRPL1	98	51.829	Latimeria_chalumnae
ENSXMAG00000002920	mrpl1	100	58.204	ENSLOCG00000007408	mrpl1	99	57.099	Lepisosteus_oculatus
ENSXMAG00000002920	mrpl1	50	45.455	ENSMFAG00000030593	MRPL1	79	45.455	Macaca_fascicularis
ENSXMAG00000002920	mrpl1	86	44.718	ENSMLEG00000030203	MRPL1	88	46.245	Mandrillus_leucophaeus
ENSXMAG00000002920	mrpl1	100	71.827	ENSMAMG00000016943	mrpl1	100	70.898	Mastacembelus_armatus
ENSXMAG00000002920	mrpl1	99	73.292	ENSMZEG00005020288	mrpl1	100	72.360	Maylandia_zebra
ENSXMAG00000002920	mrpl1	67	50.917	ENSMGAG00000005136	MRPL1	85	48.729	Meleagris_gallopavo
ENSXMAG00000002920	mrpl1	86	38.434	ENSMAUG00000019228	Mrpl1	86	40.316	Mesocricetus_auratus
ENSXMAG00000002920	mrpl1	68	52.489	ENSMICG00000032729	-	86	52.489	Microcebus_murinus
ENSXMAG00000002920	mrpl1	97	43.505	ENSMOCG00000017395	Mrpl1	78	50.593	Microtus_ochrogaster
ENSXMAG00000002920	mrpl1	78	47.059	ENSMODG00000011704	MRPL1	89	47.843	Monodelphis_domestica
ENSXMAG00000002920	mrpl1	99	70.807	ENSMALG00000006393	mrpl1	100	70.186	Monopterus_albus
ENSXMAG00000002920	mrpl1	98	44.479	ENSMUSG00000029486	Mrpl1	96	44.444	Mus_musculus
ENSXMAG00000002920	mrpl1	98	46.688	MGP_PahariEiJ_G0017208	Mrpl1	96	46.605	Mus_pahari
ENSXMAG00000002920	mrpl1	98	44.479	MGP_SPRETEiJ_G0028427	Mrpl1	76	49.606	Mus_spretus
ENSXMAG00000002920	mrpl1	94	46.732	ENSMPUG00000006794	MRPL1	72	52.766	Mustela_putorius_furo
ENSXMAG00000002920	mrpl1	76	51.626	ENSNGAG00000015669	Mrpl1	96	46.032	Nannospalax_galili
ENSXMAG00000002920	mrpl1	99	70.807	ENSNBRG00000016660	mrpl1	100	70.807	Neolamprologus_brichardi
ENSXMAG00000002920	mrpl1	77	47.012	ENSODEG00000004206	MRPL1	77	46.748	Octodon_degus
ENSXMAG00000002920	mrpl1	99	73.520	ENSONIG00000014024	mrpl1	99	72.222	Oreochromis_niloticus
ENSXMAG00000002920	mrpl1	81	47.584	ENSOANG00000003564	MRPL1	85	50.209	Ornithorhynchus_anatinus
ENSXMAG00000002920	mrpl1	78	48.617	ENSOCUG00000003852	MRPL1	78	48.617	Oryctolagus_cuniculus
ENSXMAG00000002920	mrpl1	99	67.712	ENSORLG00000018859	mrpl1	98	65.653	Oryzias_latipes
ENSXMAG00000002920	mrpl1	99	66.144	ENSOMEG00000010049	mrpl1	99	65.204	Oryzias_melastigma
ENSXMAG00000002920	mrpl1	76	50.000	ENSOGAG00000012126	MRPL1	84	49.213	Otolemur_garnettii
ENSXMAG00000002920	mrpl1	99	44.444	ENSPPAG00000041378	MRPL1	78	49.012	Pan_paniscus
ENSXMAG00000002920	mrpl1	99	47.095	ENSPPRG00000009221	MRPL1	78	52.174	Panthera_pardus
ENSXMAG00000002920	mrpl1	99	47.095	ENSPTIG00000015465	MRPL1	78	52.174	Panthera_tigris_altaica
ENSXMAG00000002920	mrpl1	99	44.444	ENSPTRG00000016199	MRPL1	78	49.012	Pan_troglodytes
ENSXMAG00000002920	mrpl1	99	42.593	ENSPANG00000007832	MRPL1	78	46.640	Papio_anubis
ENSXMAG00000002920	mrpl1	98	54.545	ENSPKIG00000019299	mrpl1	96	53.292	Paramormyrops_kingsleyae
ENSXMAG00000002920	mrpl1	66	58.411	ENSPSIG00000015906	MRPL1	96	58.411	Pelodiscus_sinensis
ENSXMAG00000002920	mrpl1	94	63.754	ENSPMGG00000004020	mrpl1	95	62.776	Periophthalmus_magnuspinnatus
ENSXMAG00000002920	mrpl1	99	44.648	ENSPEMG00000018072	-	79	49.802	Peromyscus_maniculatus_bairdii
ENSXMAG00000002920	mrpl1	78	45.098	ENSPCIG00000029496	-	78	45.098	Phascolarctos_cinereus
ENSXMAG00000002920	mrpl1	100	89.474	ENSPFOG00000013095	mrpl1	100	89.634	Poecilia_formosa
ENSXMAG00000002920	mrpl1	100	89.164	ENSPLAG00000019871	mrpl1	100	89.164	Poecilia_latipinna
ENSXMAG00000002920	mrpl1	100	89.783	ENSPMEG00000015846	mrpl1	100	89.783	Poecilia_mexicana
ENSXMAG00000002920	mrpl1	100	86.687	ENSPREG00000003524	mrpl1	100	86.687	Poecilia_reticulata
ENSXMAG00000002920	mrpl1	99	44.444	ENSPPYG00000014870	MRPL1	98	44.444	Pongo_abelii
ENSXMAG00000002920	mrpl1	99	72.360	ENSPNYG00000006464	mrpl1	99	72.446	Pundamilia_nyererei
ENSXMAG00000002920	mrpl1	94	59.740	ENSPNAG00000018662	mrpl1	98	58.280	Pygocentrus_nattereri
ENSXMAG00000002920	mrpl1	80	49.618	ENSRNOG00000002070	Mrpl1	99	44.272	Rattus_norvegicus
ENSXMAG00000002920	mrpl1	80	49.808	ENSRNOG00000045785	LOC100359687	97	44.410	Rattus_norvegicus
ENSXMAG00000002920	mrpl1	99	42.901	ENSRBIG00000040801	MRPL1	78	47.036	Rhinopithecus_bieti
ENSXMAG00000002920	mrpl1	99	42.901	ENSRROG00000041586	MRPL1	78	47.036	Rhinopithecus_roxellana
ENSXMAG00000002920	mrpl1	100	43.252	ENSSHAG00000001696	MRPL1	78	48.627	Sarcophilus_harrisii
ENSXMAG00000002920	mrpl1	99	52.121	ENSSFOG00015014444	mrpl1	99	52.121	Scleropages_formosus
ENSXMAG00000002920	mrpl1	100	69.969	ENSSMAG00000015530	mrpl1	99	69.969	Scophthalmus_maximus
ENSXMAG00000002920	mrpl1	100	69.969	ENSSDUG00000018458	mrpl1	99	69.969	Seriola_dumerili
ENSXMAG00000002920	mrpl1	100	70.279	ENSSLDG00000000399	mrpl1	96	69.345	Seriola_lalandi_dorsalis
ENSXMAG00000002920	mrpl1	79	49.606	ENSSPUG00000002005	MRPL1	76	51.739	Sphenodon_punctatus
ENSXMAG00000002920	mrpl1	90	64.041	ENSSPAG00000022922	mrpl1	87	64.041	Stegastes_partitus
ENSXMAG00000002920	mrpl1	71	49.782	ENSTGUG00000001739	MRPL1	78	47.012	Taeniopygia_guttata
ENSXMAG00000002920	mrpl1	97	64.968	ENSTRUG00000004229	mrpl1	98	63.208	Takifugu_rubripes
ENSXMAG00000002920	mrpl1	99	66.770	ENSTNIG00000016716	mrpl1	99	66.049	Tetraodon_nigroviridis
ENSXMAG00000002920	mrpl1	88	48.780	ENSUMAG00000007973	MRPL1	93	50.988	Ursus_maritimus
ENSXMAG00000002920	mrpl1	79	60.630	ENSXETG00000000373	mrpl1	71	61.317	Xenopus_tropicalis