EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000002926 (Gene tree)
Gene ID: 111609433
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio homolog 3-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8987 bases
Position: chr8:2927272-2936258
Accession: 111609433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000002945	CPL	PF08144.11	2.7e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000002950	-	3167	XM_005815057	ENSXMAP00000002945	635 (aa)	XP_005815114	M3ZL53

Gene Model

Click here to download ENSXMAG00000002926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000002926's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000002926	pum3	82	60.878	ENSG00000080608	PUM3	98	54.167	Homo_sapiens
ENSXMAG00000002926	pum3	100	69.832	ENSAPOG00000020252	pum3	100	70.138	Acanthochromis_polyacanthus
ENSXMAG00000002926	pum3	82	60.229	ENSAMEG00000012187	PUM3	91	56.860	Ailuropoda_melanoleuca
ENSXMAG00000002926	pum3	88	70.265	ENSACIG00000009786	pum3	94	70.265	Amphilophus_citrinellus
ENSXMAG00000002926	pum3	100	70.750	ENSAOCG00000004439	pum3	100	71.057	Amphiprion_ocellaris
ENSXMAG00000002926	pum3	100	70.750	ENSAPEG00000020523	pum3	100	71.057	Amphiprion_percula
ENSXMAG00000002926	pum3	99	70.291	ENSATEG00000005799	pum3	99	71.628	Anabas_testudineus
ENSXMAG00000002926	pum3	93	57.025	ENSAPLG00000002920	PUM3	97	57.025	Anas_platyrhynchos
ENSXMAG00000002926	pum3	93	55.161	ENSACAG00000003174	PUM3	95	56.345	Anolis_carolinensis
ENSXMAG00000002926	pum3	93	53.933	ENSANAG00000024520	PUM3	96	54.890	Aotus_nancymaae
ENSXMAG00000002926	pum3	100	70.788	ENSACLG00000001017	pum3	100	70.788	Astatotilapia_calliptera
ENSXMAG00000002926	pum3	99	60.742	ENSAMXG00000020911	pum3	99	60.742	Astyanax_mexicanus
ENSXMAG00000002926	pum3	95	55.446	ENSBTAG00000013357	PUM3	92	55.776	Bos_taurus
ENSXMAG00000002926	pum3	77	32.530	WBGene00014165	puf-12	64	32.530	Caenorhabditis_elegans
ENSXMAG00000002926	pum3	95	53.365	ENSCJAG00000010917	PUM3	91	56.977	Callithrix_jacchus
ENSXMAG00000002926	pum3	82	59.273	ENSCAFG00000002035	PUM3	91	56.073	Canis_familiaris
ENSXMAG00000002926	pum3	82	59.273	ENSCAFG00020026867	PUM3	91	56.073	Canis_lupus_dingo
ENSXMAG00000002926	pum3	95	55.776	ENSCHIG00000021559	PUM3	92	56.106	Capra_hircus
ENSXMAG00000002926	pum3	95	55.316	ENSTSYG00000007481	PUM3	91	55.648	Carlito_syrichta
ENSXMAG00000002926	pum3	82	58.397	ENSCAPG00000010592	-	91	55.263	Cavia_aperea
ENSXMAG00000002926	pum3	95	56.507	ENSCPOG00000008552	-	92	56.507	Cavia_porcellus
ENSXMAG00000002926	pum3	94	53.488	ENSCCAG00000032650	PUM3	91	56.811	Cebus_capucinus
ENSXMAG00000002926	pum3	95	56.478	ENSCATG00000024880	PUM3	91	56.811	Cercocebus_atys
ENSXMAG00000002926	pum3	82	60.115	ENSCLAG00000011892	PUM3	95	55.309	Chinchilla_lanigera
ENSXMAG00000002926	pum3	93	53.772	ENSCSAG00000008691	PUM3	91	56.811	Chlorocebus_sabaeus
ENSXMAG00000002926	pum3	79	49.800	ENSCHOG00000002535	PUM3	74	49.800	Choloepus_hoffmanni
ENSXMAG00000002926	pum3	99	55.063	ENSCPBG00000025470	PUM3	90	56.487	Chrysemys_picta_bellii
ENSXMAG00000002926	pum3	84	38.420	ENSCING00000024199	-	99	38.420	Ciona_intestinalis
ENSXMAG00000002926	pum3	86	38.989	ENSCSAVG00000006072	-	99	38.740	Ciona_savignyi
ENSXMAG00000002926	pum3	82	60.878	ENSCANG00000006142	PUM3	91	57.309	Colobus_angolensis_palliatus
ENSXMAG00000002926	pum3	82	60.305	ENSCGRG00001016402	Pum3	91	56.645	Cricetulus_griseus_chok1gshd
ENSXMAG00000002926	pum3	82	60.305	ENSCGRG00000010207	Pum3	91	56.645	Cricetulus_griseus_crigri
ENSXMAG00000002926	pum3	89	65.734	ENSCSEG00000001565	pum3	99	65.734	Cynoglossus_semilaevis
ENSXMAG00000002926	pum3	71	70.280	ENSCVAG00000006550	pum3	100	70.280	Cyprinodon_variegatus
ENSXMAG00000002926	pum3	99	60.530	ENSDARG00000087779	pum3	99	60.530	Danio_rerio
ENSXMAG00000002926	pum3	82	51.238	ENSDNOG00000008157	PUM3	70	47.320	Dasypus_novemcinctus
ENSXMAG00000002926	pum3	82	59.273	ENSETEG00000015331	PUM3	82	59.287	Echinops_telfairi
ENSXMAG00000002926	pum3	82	39.556	ENSEBUG00000011586	pum3	79	39.556	Eptatretus_burgeri
ENSXMAG00000002926	pum3	82	60.305	ENSEASG00005010350	PUM3	92	56.106	Equus_asinus_asinus
ENSXMAG00000002926	pum3	82	60.305	ENSECAG00000017193	PUM3	92	56.106	Equus_caballus
ENSXMAG00000002926	pum3	89	49.117	ENSEEUG00000010314	PUM3	92	49.734	Erinaceus_europaeus
ENSXMAG00000002926	pum3	99	59.720	ENSELUG00000002215	pum3	97	59.720	Esox_lucius
ENSXMAG00000002926	pum3	97	56.189	ENSFALG00000010509	PUM3	93	56.189	Ficedula_albicollis
ENSXMAG00000002926	pum3	95	53.292	ENSFDAG00000021027	PUM3	95	55.573	Fukomys_damarensis
ENSXMAG00000002926	pum3	99	82.143	ENSFHEG00000015576	pum3	100	82.143	Fundulus_heteroclitus
ENSXMAG00000002926	pum3	84	66.855	ENSGMOG00000014217	pum3	99	66.855	Gadus_morhua
ENSXMAG00000002926	pum3	83	61.524	ENSGALG00000010178	PUM3	100	55.093	Gallus_gallus
ENSXMAG00000002926	pum3	57	91.781	ENSGAFG00000001930	pum3	62	91.781	Gambusia_affinis
ENSXMAG00000002926	pum3	85	74.770	ENSGACG00000017878	pum3	99	74.770	Gasterosteus_aculeatus
ENSXMAG00000002926	pum3	99	55.678	ENSGAGG00000018983	PUM3	97	55.678	Gopherus_agassizii
ENSXMAG00000002926	pum3	82	60.687	ENSGGOG00000006143	PUM3	93	55.412	Gorilla_gorilla
ENSXMAG00000002926	pum3	100	59.398	ENSHBUG00000012903	pum3	100	59.398	Haplochromis_burtoni
ENSXMAG00000002926	pum3	91	54.120	ENSHGLG00000015868	-	91	56.551	Heterocephalus_glaber_female
ENSXMAG00000002926	pum3	91	54.120	ENSHGLG00100018825	PUM3	91	56.551	Heterocephalus_glaber_male
ENSXMAG00000002926	pum3	100	65.770	ENSHCOG00000010306	pum3	100	66.218	Hippocampus_comes
ENSXMAG00000002926	pum3	95	61.626	ENSIPUG00000024801	pum3	99	62.441	Ictalurus_punctatus
ENSXMAG00000002926	pum3	82	60.115	ENSSTOG00000009586	PUM3	95	55.151	Ictidomys_tridecemlineatus
ENSXMAG00000002926	pum3	93	55.611	ENSJJAG00000012563	Pum3	91	55.611	Jaculus_jaculus
ENSXMAG00000002926	pum3	100	74.531	ENSKMAG00000010277	pum3	100	74.531	Kryptolebias_marmoratus
ENSXMAG00000002926	pum3	100	68.750	ENSLBEG00000012213	pum3	100	69.207	Labrus_bergylta
ENSXMAG00000002926	pum3	99	52.446	ENSLACG00000008312	PUM3	99	52.696	Latimeria_chalumnae
ENSXMAG00000002926	pum3	100	58.333	ENSLOCG00000012529	pum3	100	58.333	Lepisosteus_oculatus
ENSXMAG00000002926	pum3	98	54.186	ENSLAFG00000017341	PUM3	96	55.414	Loxodonta_africana
ENSXMAG00000002926	pum3	93	53.772	ENSMFAG00000001430	PUM3	91	56.811	Macaca_fascicularis
ENSXMAG00000002926	pum3	93	53.772	ENSMMUG00000002362	PUM3	90	56.811	Macaca_mulatta
ENSXMAG00000002926	pum3	93	53.772	ENSMNEG00000035288	PUM3	91	56.811	Macaca_nemestrina
ENSXMAG00000002926	pum3	93	53.772	ENSMLEG00000034820	PUM3	91	56.811	Mandrillus_leucophaeus
ENSXMAG00000002926	pum3	97	69.921	ENSMAMG00000022861	pum3	97	70.551	Mastacembelus_armatus
ENSXMAG00000002926	pum3	100	70.853	ENSMZEG00005014205	pum3	97	70.853	Maylandia_zebra
ENSXMAG00000002926	pum3	83	56.121	ENSMGAG00000002255	PUM3	89	55.664	Meleagris_gallopavo
ENSXMAG00000002926	pum3	90	56.197	ENSMAUG00000009733	Pum3	91	56.931	Mesocricetus_auratus
ENSXMAG00000002926	pum3	95	51.869	ENSMICG00000045916	PUM3	83	53.943	Microcebus_murinus
ENSXMAG00000002926	pum3	99	53.343	ENSMOCG00000019519	-	91	56.931	Microtus_ochrogaster
ENSXMAG00000002926	pum3	99	52.234	ENSMOCG00000014830	-	99	52.234	Microtus_ochrogaster
ENSXMAG00000002926	pum3	96	64.960	ENSMMOG00000012184	pum3	99	64.960	Mola_mola
ENSXMAG00000002926	pum3	82	57.170	ENSMODG00000015417	PUM3	78	55.789	Monodelphis_domestica
ENSXMAG00000002926	pum3	100	68.950	ENSMALG00000022164	pum3	92	70.320	Monopterus_albus
ENSXMAG00000002926	pum3	89	55.786	MGP_CAROLIEiJ_G0022845	Pum3	91	56.271	Mus_caroli
ENSXMAG00000002926	pum3	89	55.440	ENSMUSG00000041360	Pum3	91	55.941	Mus_musculus
ENSXMAG00000002926	pum3	93	52.809	MGP_PahariEiJ_G0014338	Pum3	91	55.960	Mus_pahari
ENSXMAG00000002926	pum3	89	55.613	MGP_SPRETEiJ_G0023763	Pum3	91	56.106	Mus_spretus
ENSXMAG00000002926	pum3	98	54.487	ENSMPUG00000005125	PUM3	95	54.487	Mustela_putorius_furo
ENSXMAG00000002926	pum3	83	59.886	ENSMLUG00000002309	PUM3	92	55.776	Myotis_lucifugus
ENSXMAG00000002926	pum3	82	57.611	ENSNGAG00000019468	Pum3	91	53.422	Nannospalax_galili
ENSXMAG00000002926	pum3	96	66.077	ENSNBRG00000021370	pum3	95	66.077	Neolamprologus_brichardi
ENSXMAG00000002926	pum3	95	53.208	ENSNLEG00000008712	PUM3	91	56.977	Nomascus_leucogenys
ENSXMAG00000002926	pum3	77	42.418	ENSMEUG00000013606	-	99	42.406	Notamacropus_eugenii
ENSXMAG00000002926	pum3	55	49.856	ENSOPRG00000004225	-	63	47.294	Ochotona_princeps
ENSXMAG00000002926	pum3	98	50.316	ENSODEG00000016477	-	95	50.316	Octodon_degus
ENSXMAG00000002926	pum3	82	60.115	ENSODEG00000003625	-	95	55.008	Octodon_degus
ENSXMAG00000002926	pum3	100	71.186	ENSONIG00000012733	pum3	100	71.186	Oreochromis_niloticus
ENSXMAG00000002926	pum3	82	57.143	ENSOANG00000014995	PUM3	98	57.196	Ornithorhynchus_anatinus
ENSXMAG00000002926	pum3	82	58.969	ENSOCUG00000026104	-	97	54.054	Oryctolagus_cuniculus
ENSXMAG00000002926	pum3	82	59.160	ENSOCUG00000004189	-	97	54.028	Oryctolagus_cuniculus
ENSXMAG00000002926	pum3	100	68.056	ENSORLG00000014935	pum3	100	68.056	Oryzias_latipes
ENSXMAG00000002926	pum3	100	67.901	ENSORLG00020002841	pum3	100	67.901	Oryzias_latipes_hni
ENSXMAG00000002926	pum3	100	68.364	ENSORLG00015015906	pum3	100	68.364	Oryzias_latipes_hsok
ENSXMAG00000002926	pum3	100	66.821	ENSOMEG00000009427	pum3	100	66.821	Oryzias_melastigma
ENSXMAG00000002926	pum3	88	41.594	ENSOGAG00000033481	-	90	42.388	Otolemur_garnettii
ENSXMAG00000002926	pum3	95	52.418	ENSOGAG00000008125	-	96	54.101	Otolemur_garnettii
ENSXMAG00000002926	pum3	95	55.611	ENSOARG00000013337	PUM3	92	55.941	Ovis_aries
ENSXMAG00000002926	pum3	82	60.687	ENSPPAG00000041337	PUM3	93	55.412	Pan_paniscus
ENSXMAG00000002926	pum3	82	59.656	ENSPPRG00000000809	PUM3	91	56.033	Panthera_pardus
ENSXMAG00000002926	pum3	82	59.847	ENSPTIG00000021934	PUM3	91	56.198	Panthera_tigris_altaica
ENSXMAG00000002926	pum3	82	60.878	ENSPTRG00000020735	PUM3	93	55.574	Pan_troglodytes
ENSXMAG00000002926	pum3	93	53.933	ENSPANG00000025118	PUM3	91	56.977	Papio_anubis
ENSXMAG00000002926	pum3	99	57.274	ENSPKIG00000022249	pum3	99	56.958	Paramormyrops_kingsleyae
ENSXMAG00000002926	pum3	99	55.675	ENSPSIG00000016272	PUM3	99	56.595	Pelodiscus_sinensis
ENSXMAG00000002926	pum3	78	70.445	ENSPMGG00000021261	pum3	99	70.445	Periophthalmus_magnuspinnatus
ENSXMAG00000002926	pum3	95	45.634	ENSPEMG00000019340	-	90	45.634	Peromyscus_maniculatus_bairdii
ENSXMAG00000002926	pum3	89	56.637	ENSPCIG00000030598	PUM3	75	56.637	Phascolarctos_cinereus
ENSXMAG00000002926	pum3	100	87.559	ENSPFOG00000001719	pum3	100	87.559	Poecilia_formosa
ENSXMAG00000002926	pum3	100	92.610	ENSPLAG00000020010	pum3	100	92.925	Poecilia_latipinna
ENSXMAG00000002926	pum3	100	91.824	ENSPMEG00000017451	pum3	100	92.138	Poecilia_mexicana
ENSXMAG00000002926	pum3	56	91.579	ENSPREG00000019478	-	69	91.579	Poecilia_reticulata
ENSXMAG00000002926	pum3	82	61.069	ENSPPYG00000019255	PUM3	93	55.735	Pongo_abelii
ENSXMAG00000002926	pum3	96	49.035	ENSPCAG00000005797	PUM3	89	49.114	Procavia_capensis
ENSXMAG00000002926	pum3	82	59.542	ENSPCOG00000027325	PUM3	95	55.200	Propithecus_coquereli
ENSXMAG00000002926	pum3	83	59.811	ENSPVAG00000016135	PUM3	78	59.738	Pteropus_vampyrus
ENSXMAG00000002926	pum3	100	70.634	ENSPNYG00000016124	pum3	100	70.634	Pundamilia_nyererei
ENSXMAG00000002926	pum3	99	58.733	ENSPNAG00000026524	pum3	99	59.558	Pygocentrus_nattereri
ENSXMAG00000002926	pum3	93	53.440	ENSRNOG00000012574	Pum3	91	56.931	Rattus_norvegicus
ENSXMAG00000002926	pum3	90	56.441	ENSRNOG00000048356	RGD1308750	91	56.601	Rattus_norvegicus
ENSXMAG00000002926	pum3	82	60.496	ENSRBIG00000036924	PUM3	91	56.811	Rhinopithecus_bieti
ENSXMAG00000002926	pum3	82	60.687	ENSRROG00000041089	PUM3	91	57.143	Rhinopithecus_roxellana
ENSXMAG00000002926	pum3	82	60.496	ENSSBOG00000028066	PUM3	91	56.645	Saimiri_boliviensis_boliviensis
ENSXMAG00000002926	pum3	97	51.692	ENSSHAG00000003730	PUM3	95	53.195	Sarcophilus_harrisii
ENSXMAG00000002926	pum3	99	58.230	ENSSFOG00015018778	pum3	99	58.230	Scleropages_formosus
ENSXMAG00000002926	pum3	100	70.170	ENSSMAG00000013236	pum3	99	71.142	Scophthalmus_maximus
ENSXMAG00000002926	pum3	100	70.890	ENSSDUG00000001887	pum3	99	71.342	Seriola_dumerili
ENSXMAG00000002926	pum3	100	71.298	ENSSLDG00000015766	pum3	99	71.908	Seriola_lalandi_dorsalis
ENSXMAG00000002926	pum3	82	55.449	ENSSARG00000000579	PUM3	99	51.515	Sorex_araneus
ENSXMAG00000002926	pum3	99	54.631	ENSSPUG00000001707	PUM3	96	54.631	Sphenodon_punctatus
ENSXMAG00000002926	pum3	100	71.605	ENSSPAG00000003976	pum3	100	71.605	Stegastes_partitus
ENSXMAG00000002926	pum3	95	55.372	ENSSSCG00000005227	PUM3	91	55.372	Sus_scrofa
ENSXMAG00000002926	pum3	97	54.419	ENSTGUG00000005339	PUM3	99	55.280	Taeniopygia_guttata
ENSXMAG00000002926	pum3	100	69.044	ENSTRUG00000004074	pum3	99	69.044	Takifugu_rubripes
ENSXMAG00000002926	pum3	93	71.838	ENSTNIG00000010325	pum3	98	70.032	Tetraodon_nigroviridis
ENSXMAG00000002926	pum3	82	46.095	ENSTBEG00000013058	PUM3	82	46.355	Tupaia_belangeri
ENSXMAG00000002926	pum3	95	50.658	ENSTTRG00000001062	PUM3	88	50.987	Tursiops_truncatus
ENSXMAG00000002926	pum3	83	55.849	ENSUMAG00000018443	PUM3	99	55.849	Ursus_maritimus
ENSXMAG00000002926	pum3	95	55.702	ENSVPAG00000010766	PUM3	91	56.033	Vicugna_pacos
ENSXMAG00000002926	pum3	82	59.465	ENSVVUG00000006527	PUM3	91	56.240	Vulpes_vulpes
ENSXMAG00000002926	pum3	94	45.469	ENSXETG00000011707	pum3	98	45.342	Xenopus_tropicalis
ENSXMAG00000002926	pum3	95	95.840	ENSXCOG00000006725	pum3	100	95.840	Xiphophorus_couchianus