EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003050 (Gene tree)
Gene ID: 102223839
Gene Symbol: srsf7a
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 10629 bases
Position: chr18:5073249-5083877
Accession: 102223839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000021854	RRM_1	PF00076.22	1.3e-15	1	1
ENSXMAP00000003056	RRM_1	PF00076.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003061	-	1717	XM_023351646	ENSXMAP00000003056	257 (aa)	XP_023207414	M3ZLG4
ENSXMAT00000041707	-	4713	XM_023351648	ENSXMAP00000021854	243 (aa)	XP_023207416	UPI000C6E1EBB

Gene Model

Click here to download ENSXMAG00000003050's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG
xma05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003050	srsf7a	61	53.333	ENSACIG00000016419	-	56	74.118	Amphilophus_citrinellus
ENSXMAG00000003050	srsf7a	93	48.246	ENSANAG00000019399	SRSF7	81	77.477	Aotus_nancymaae
ENSXMAG00000003050	srsf7a	89	63.636	ENSAMXG00000007005	srsf7b	54	74.336	Astyanax_mexicanus
ENSXMAG00000003050	srsf7a	76	46.237	ENSCJAG00000015185	SRSF7	81	77.477	Callithrix_jacchus
ENSXMAG00000003050	srsf7a	50	57.600	ENSCAFG00020013547	-	69	58.559	Canis_lupus_dingo
ENSXMAG00000003050	srsf7a	76	46.237	ENSCATG00000031728	SRSF7	81	77.477	Cercocebus_atys
ENSXMAG00000003050	srsf7a	65	50.943	ENSCSAG00000010291	SRSF3	52	74.118	Chlorocebus_sabaeus
ENSXMAG00000003050	srsf7a	64	51.250	ENSCSAVG00000007369	-	68	50.820	Ciona_savignyi
ENSXMAG00000003050	srsf7a	76	46.237	ENSCANG00000040757	SRSF7	81	77.477	Colobus_angolensis_palliatus
ENSXMAG00000003050	srsf7a	62	54.605	ENSCSEG00000002271	srsf3b	72	68.421	Cynoglossus_semilaevis
ENSXMAG00000003050	srsf7a	56	91.971	ENSCSEG00000006378	srsf7a	79	97.297	Cynoglossus_semilaevis
ENSXMAG00000003050	srsf7a	55	56.296	ENSCVAG00000009865	-	56	74.118	Cyprinodon_variegatus
ENSXMAG00000003050	srsf7a	100	95.367	ENSCVAG00000020083	srsf7a	100	95.367	Cyprinodon_variegatus
ENSXMAG00000003050	srsf7a	94	73.529	ENSDARG00000035325	srsf7a	85	93.548	Danio_rerio
ENSXMAG00000003050	srsf7a	63	52.469	ENSEBUG00000002677	-	56	67.442	Eptatretus_burgeri
ENSXMAG00000003050	srsf7a	64	52.410	ENSELUG00000014357	SRSF3	58	69.149	Esox_lucius
ENSXMAG00000003050	srsf7a	78	62.559	ENSELUG00000018155	srsf7b	80	75.676	Esox_lucius
ENSXMAG00000003050	srsf7a	88	66.667	ENSFHEG00000007159	srsf7a	66	99.180	Fundulus_heteroclitus
ENSXMAG00000003050	srsf7a	100	78.862	ENSGMOG00000002004	srsf7a	53	93.496	Gadus_morhua
ENSXMAG00000003050	srsf7a	100	98.444	ENSGAFG00000002177	srsf7a	100	98.444	Gambusia_affinis
ENSXMAG00000003050	srsf7a	76	46.237	ENSGGOG00000014620	SRSF7	81	77.477	Gorilla_gorilla
ENSXMAG00000003050	srsf7a	60	51.351	ENSHCOG00000017795	-	51	70.588	Hippocampus_comes
ENSXMAG00000003050	srsf7a	57	57.143	ENSJJAG00000020230	-	68	62.162	Jaculus_jaculus
ENSXMAG00000003050	srsf7a	100	96.109	ENSKMAG00000002322	srsf7a	100	96.109	Kryptolebias_marmoratus
ENSXMAG00000003050	srsf7a	65	44.025	ENSLBEG00000013364	srsf3b	73	72.941	Labrus_bergylta
ENSXMAG00000003050	srsf7a	70	73.099	ENSLACG00000018688	srsf7a	54	86.607	Latimeria_chalumnae
ENSXMAG00000003050	srsf7a	76	46.237	ENSMFAG00000001980	SRSF7	81	77.477	Macaca_fascicularis
ENSXMAG00000003050	srsf7a	72	47.727	ENSMMUG00000011025	SRSF7	51	77.477	Macaca_mulatta
ENSXMAG00000003050	srsf7a	76	46.237	ENSMNEG00000036669	SRSF7	51	76.923	Macaca_nemestrina
ENSXMAG00000003050	srsf7a	76	46.237	ENSMLEG00000038852	SRSF7	81	77.477	Mandrillus_leucophaeus
ENSXMAG00000003050	srsf7a	71	45.665	ENSMAUG00000011430	-	54	60.241	Mesocricetus_auratus
ENSXMAG00000003050	srsf7a	59	48.611	ENSMOCG00000014206	-	87	47.682	Microtus_ochrogaster
ENSXMAG00000003050	srsf7a	51	95.200	ENSMMOG00000005208	srsf7a	74	98.198	Mola_mola
ENSXMAG00000003050	srsf7a	65	52.201	ENSMLUG00000010671	-	52	74.118	Myotis_lucifugus
ENSXMAG00000003050	srsf7a	67	97.531	ENSNBRG00000006601	srsf7a	73	99.099	Neolamprologus_brichardi
ENSXMAG00000003050	srsf7a	76	46.237	ENSNLEG00000016349	SRSF7	81	77.477	Nomascus_leucogenys
ENSXMAG00000003050	srsf7a	65	50.296	ENSORLG00015004309	srsf3b	51	74.118	Oryzias_latipes_hsok
ENSXMAG00000003050	srsf7a	62	49.342	ENSOMEG00000014893	srsf3b	64	69.072	Oryzias_melastigma
ENSXMAG00000003050	srsf7a	76	46.237	ENSPPAG00000017907	SRSF7	51	76.923	Pan_paniscus
ENSXMAG00000003050	srsf7a	76	46.237	ENSPTRG00000011851	SRSF7	53	78.899	Pan_troglodytes
ENSXMAG00000003050	srsf7a	76	46.237	ENSPANG00000018079	SRSF7	51	76.923	Papio_anubis
ENSXMAG00000003050	srsf7a	54	71.642	ENSPKIG00000017425	srsf7b	63	77.477	Paramormyrops_kingsleyae
ENSXMAG00000003050	srsf7a	64	58.599	ENSPMAG00000004472	srsf7a	54	72.642	Petromyzon_marinus
ENSXMAG00000003050	srsf7a	60	71.141	ENSPCIG00000020694	-	81	77.477	Phascolarctos_cinereus
ENSXMAG00000003050	srsf7a	100	99.611	ENSPFOG00000017803	srsf7a	100	99.611	Poecilia_formosa
ENSXMAG00000003050	srsf7a	100	98.833	ENSPLAG00000004839	srsf7a	100	98.833	Poecilia_latipinna
ENSXMAG00000003050	srsf7a	100	99.611	ENSPMEG00000002757	srsf7a	100	99.611	Poecilia_mexicana
ENSXMAG00000003050	srsf7a	52	98.413	ENSPREG00000020685	srsf7a	99	98.413	Poecilia_reticulata
ENSXMAG00000003050	srsf7a	52	85.156	ENSPNAG00000012288	srsf7a	50	87.097	Pygocentrus_nattereri
ENSXMAG00000003050	srsf7a	65	62.500	ENSRNOG00000008398	AABR07055789.1	67	67.568	Rattus_norvegicus
ENSXMAG00000003050	srsf7a	72	47.727	ENSRBIG00000024695	SRSF7	51	78.182	Rhinopithecus_bieti
ENSXMAG00000003050	srsf7a	76	46.237	ENSSBOG00000025074	SRSF7	81	77.477	Saimiri_boliviensis_boliviensis
ENSXMAG00000003050	srsf7a	62	53.289	ENSSMAG00000000387	srsf3b	60	69.072	Scophthalmus_maximus
ENSXMAG00000003050	srsf7a	50	72.581	ENSSDUG00000021338	srsf7b	78	75.676	Seriola_dumerili
ENSXMAG00000003050	srsf7a	53	96.875	ENSSPAG00000022192	srsf7a	98	96.748	Stegastes_partitus
ENSXMAG00000003050	srsf7a	95	78.776	ENSTRUG00000010529	srsf7a	96	89.796	Takifugu_rubripes
ENSXMAG00000003050	srsf7a	77	58.000	ENSTTRG00000014324	SRSF7	50	72.727	Tursiops_truncatus
ENSXMAG00000003050	srsf7a	60	53.691	ENSVVUG00000006092	-	69	65.278	Vulpes_vulpes
ENSXMAG00000003050	srsf7a	52	98.413	ENSXCOG00000009381	srsf7a	99	98.413	Xiphophorus_couchianus