EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003130 (Gene tree)
Gene ID: 102236651
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4648 bases
Position: chr22:15384249-15388896
Accession: 102236651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003136	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003141	-	1900	XM_005801590	ENSXMAP00000003136	198 (aa)	XP_005801647	M3ZLP4

Gene Model

Click here to download ENSXMAG00000003130's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003130	sar1ab	100	93.939	ENSACIG00000019827	sar1ab	100	93.939	Amphilophus_citrinellus
ENSXMAG00000003130	sar1ab	100	93.434	ENSAOCG00000022062	sar1ab	100	93.434	Amphiprion_ocellaris
ENSXMAG00000003130	sar1ab	100	93.434	ENSAPEG00000011525	sar1ab	100	93.434	Amphiprion_percula
ENSXMAG00000003130	sar1ab	100	91.919	ENSATEG00000003466	sar1ab	100	91.919	Anabas_testudineus
ENSXMAG00000003130	sar1ab	100	91.414	ENSACLG00000013053	sar1ab	100	91.414	Astatotilapia_calliptera
ENSXMAG00000003130	sar1ab	100	90.404	ENSCSEG00000004825	sar1ab	100	90.404	Cynoglossus_semilaevis
ENSXMAG00000003130	sar1ab	100	95.455	ENSCVAG00000015162	sar1ab	100	95.455	Cyprinodon_variegatus
ENSXMAG00000003130	sar1ab	100	79.798	ENSCVAG00000006500	-	100	79.798	Cyprinodon_variegatus
ENSXMAG00000003130	sar1ab	100	86.869	ENSDARG00000033320	sar1ab	100	86.869	Danio_rerio
ENSXMAG00000003130	sar1ab	100	90.404	ENSELUG00000024279	sar1ab	100	90.404	Esox_lucius
ENSXMAG00000003130	sar1ab	100	82.323	ENSELUG00000013652	sar1a	100	82.323	Esox_lucius
ENSXMAG00000003130	sar1ab	100	94.949	ENSFHEG00000021773	sar1ab	100	94.949	Fundulus_heteroclitus
ENSXMAG00000003130	sar1ab	100	80.303	ENSFHEG00000012352	-	100	80.303	Fundulus_heteroclitus
ENSXMAG00000003130	sar1ab	100	89.394	ENSGMOG00000012588	sar1ab	100	89.394	Gadus_morhua
ENSXMAG00000003130	sar1ab	100	99.495	ENSGAFG00000009702	sar1ab	100	99.495	Gambusia_affinis
ENSXMAG00000003130	sar1ab	100	80.303	ENSGAFG00000004846	-	100	80.303	Gambusia_affinis
ENSXMAG00000003130	sar1ab	100	92.929	ENSGACG00000008616	sar1ab	100	92.929	Gasterosteus_aculeatus
ENSXMAG00000003130	sar1ab	100	91.414	ENSHBUG00000021221	sar1ab	100	91.414	Haplochromis_burtoni
ENSXMAG00000003130	sar1ab	100	89.394	ENSHCOG00000002845	sar1ab	80	89.394	Hippocampus_comes
ENSXMAG00000003130	sar1ab	100	96.465	ENSKMAG00000018006	sar1ab	100	96.465	Kryptolebias_marmoratus
ENSXMAG00000003130	sar1ab	100	91.414	ENSLBEG00000001114	sar1ab	100	91.414	Labrus_bergylta
ENSXMAG00000003130	sar1ab	100	91.919	ENSMAMG00000021314	sar1ab	100	91.919	Mastacembelus_armatus
ENSXMAG00000003130	sar1ab	100	91.414	ENSMZEG00005027606	sar1ab	100	91.414	Maylandia_zebra
ENSXMAG00000003130	sar1ab	100	91.414	ENSMMOG00000010360	sar1ab	100	91.414	Mola_mola
ENSXMAG00000003130	sar1ab	100	90.909	ENSMALG00000005831	sar1ab	100	90.909	Monopterus_albus
ENSXMAG00000003130	sar1ab	100	91.919	ENSNBRG00000018772	sar1ab	100	91.919	Neolamprologus_brichardi
ENSXMAG00000003130	sar1ab	100	92.929	ENSONIG00000018509	sar1ab	100	92.929	Oreochromis_niloticus
ENSXMAG00000003130	sar1ab	100	91.919	ENSORLG00000006779	sar1ab	67	91.919	Oryzias_latipes
ENSXMAG00000003130	sar1ab	100	80.808	ENSORLG00000009132	-	90	80.808	Oryzias_latipes
ENSXMAG00000003130	sar1ab	100	80.808	ENSORLG00020007024	-	90	80.808	Oryzias_latipes_hni
ENSXMAG00000003130	sar1ab	100	91.414	ENSORLG00020005458	sar1ab	100	91.414	Oryzias_latipes_hni
ENSXMAG00000003130	sar1ab	100	91.919	ENSORLG00015010542	sar1ab	100	91.919	Oryzias_latipes_hsok
ENSXMAG00000003130	sar1ab	100	80.303	ENSORLG00015006223	-	94	84.821	Oryzias_latipes_hsok
ENSXMAG00000003130	sar1ab	100	80.303	ENSOMEG00000012020	-	100	80.303	Oryzias_melastigma
ENSXMAG00000003130	sar1ab	100	93.939	ENSOMEG00000004948	sar1ab	100	93.939	Oryzias_melastigma
ENSXMAG00000003130	sar1ab	100	84.343	ENSPKIG00000007615	sar1ab	100	84.343	Paramormyrops_kingsleyae
ENSXMAG00000003130	sar1ab	100	91.414	ENSPMGG00000013330	sar1ab	100	91.414	Periophthalmus_magnuspinnatus
ENSXMAG00000003130	sar1ab	100	98.485	ENSPFOG00000023432	sar1ab	100	98.485	Poecilia_formosa
ENSXMAG00000003130	sar1ab	100	97.980	ENSPLAG00000023705	sar1ab	100	97.980	Poecilia_latipinna
ENSXMAG00000003130	sar1ab	100	79.798	ENSPMEG00000001717	-	100	79.798	Poecilia_mexicana
ENSXMAG00000003130	sar1ab	100	98.485	ENSPMEG00000000559	sar1ab	100	98.485	Poecilia_mexicana
ENSXMAG00000003130	sar1ab	100	98.485	ENSPREG00000016098	sar1ab	100	98.485	Poecilia_reticulata
ENSXMAG00000003130	sar1ab	100	91.919	ENSPNYG00000011603	sar1ab	100	91.919	Pundamilia_nyererei
ENSXMAG00000003130	sar1ab	100	86.364	ENSPNAG00000008007	sar1ab	100	86.364	Pygocentrus_nattereri
ENSXMAG00000003130	sar1ab	100	86.869	ENSSFOG00015014010	sar1a	100	86.869	Scleropages_formosus
ENSXMAG00000003130	sar1ab	72	76.923	ENSSMAG00000020758	sar1ab	95	76.923	Scophthalmus_maximus
ENSXMAG00000003130	sar1ab	100	92.929	ENSSDUG00000010773	sar1ab	100	92.929	Seriola_dumerili
ENSXMAG00000003130	sar1ab	100	92.929	ENSSLDG00000025558	sar1ab	100	92.929	Seriola_lalandi_dorsalis
ENSXMAG00000003130	sar1ab	100	93.939	ENSSPAG00000009194	sar1ab	100	93.939	Stegastes_partitus
ENSXMAG00000003130	sar1ab	100	90.909	ENSTRUG00000007269	sar1ab	100	90.909	Takifugu_rubripes
ENSXMAG00000003130	sar1ab	100	89.899	ENSTNIG00000008635	sar1ab	100	89.899	Tetraodon_nigroviridis
ENSXMAG00000003130	sar1ab	100	80.808	ENSXMAG00000026223	SAR1A	100	80.808	Xiphophorus_maculatus