EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003142 (Gene tree)
Gene ID: 102222191
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8042 bases
Position: chr23:13689874-13697915
Accession: 102222191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003145	PTS_2-RNA	PF01885.16	8.7e-63	1	1
ENSXMAP00000031676	PTS_2-RNA	PF01885.16	8.7e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000032746	-	6247	XM_005806530	ENSXMAP00000031676	223 (aa)	XP_005806587	UPI000293DFB8
ENSXMAT00000003150	-	5759	XM_023328659	ENSXMAP00000003145	223 (aa)	XP_023184427	M3ZLQ3

Gene Model

Click here to download ENSXMAG00000003142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003142	trpt1	98	54.464	ENSG00000149743	TRPT1	88	56.354	Homo_sapiens
ENSXMAG00000003142	trpt1	93	85.507	ENSAPOG00000012925	trpt1	90	85.507	Acanthochromis_polyacanthus
ENSXMAG00000003142	trpt1	92	58.454	ENSAMEG00000018040	TRPT1	81	58.454	Ailuropoda_melanoleuca
ENSXMAG00000003142	trpt1	88	84.264	ENSACIG00000022413	trpt1	88	83.838	Amphilophus_citrinellus
ENSXMAG00000003142	trpt1	93	85.507	ENSAOCG00000001163	trpt1	78	85.507	Amphiprion_ocellaris
ENSXMAG00000003142	trpt1	93	85.990	ENSAPEG00000009873	trpt1	90	85.990	Amphiprion_percula
ENSXMAG00000003142	trpt1	93	85.024	ENSATEG00000014371	trpt1	91	85.024	Anabas_testudineus
ENSXMAG00000003142	trpt1	91	58.824	ENSACAG00000000696	TRPT1	90	58.824	Anolis_carolinensis
ENSXMAG00000003142	trpt1	98	54.667	ENSANAG00000019580	TRPT1	81	57.005	Aotus_nancymaae
ENSXMAG00000003142	trpt1	93	85.507	ENSACLG00000016893	trpt1	90	85.507	Astatotilapia_calliptera
ENSXMAG00000003142	trpt1	93	70.531	ENSAMXG00000010533	trpt1	91	70.531	Astyanax_mexicanus
ENSXMAG00000003142	trpt1	98	55.455	ENSBTAG00000016555	TRPT1	88	56.593	Bos_taurus
ENSXMAG00000003142	trpt1	92	56.250	ENSCJAG00000018169	TRPT1	81	56.250	Callithrix_jacchus
ENSXMAG00000003142	trpt1	92	57.971	ENSCAFG00000014591	TRPT1	82	57.488	Canis_familiaris
ENSXMAG00000003142	trpt1	90	58.416	ENSCAFG00020014101	TRPT1	83	57.971	Canis_lupus_dingo
ENSXMAG00000003142	trpt1	98	55.455	ENSCHIG00000021308	TRPT1	82	57.005	Capra_hircus
ENSXMAG00000003142	trpt1	79	54.749	ENSTSYG00000026766	TRPT1	88	54.749	Carlito_syrichta
ENSXMAG00000003142	trpt1	98	56.164	ENSCAPG00000016934	TRPT1	86	57.488	Cavia_aperea
ENSXMAG00000003142	trpt1	92	57.282	ENSCPOG00000002923	TRPT1	82	57.282	Cavia_porcellus
ENSXMAG00000003142	trpt1	77	57.803	ENSCCAG00000025683	TRPT1	96	50.000	Cebus_capucinus
ENSXMAG00000003142	trpt1	98	53.540	ENSCATG00000031563	TRPT1	81	55.769	Cercocebus_atys
ENSXMAG00000003142	trpt1	98	54.795	ENSCLAG00000016380	TRPT1	81	56.311	Chinchilla_lanigera
ENSXMAG00000003142	trpt1	98	53.333	ENSCSAG00000006952	TRPT1	81	55.556	Chlorocebus_sabaeus
ENSXMAG00000003142	trpt1	64	44.444	ENSCING00000002405	-	76	44.444	Ciona_intestinalis
ENSXMAG00000003142	trpt1	88	38.462	ENSCING00000024241	-	81	38.462	Ciona_intestinalis
ENSXMAG00000003142	trpt1	93	41.014	ENSCSAVG00000003949	-	88	42.640	Ciona_savignyi
ENSXMAG00000003142	trpt1	89	42.233	ENSCSAVG00000011071	-	60	42.564	Ciona_savignyi
ENSXMAG00000003142	trpt1	98	53.182	ENSCANG00000042980	TRPT1	81	54.589	Colobus_angolensis_palliatus
ENSXMAG00000003142	trpt1	99	54.867	ENSCGRG00001008474	Trpt1	82	57.488	Cricetulus_griseus_chok1gshd
ENSXMAG00000003142	trpt1	99	54.867	ENSCGRG00000009793	Trpt1	82	57.488	Cricetulus_griseus_crigri
ENSXMAG00000003142	trpt1	94	75.598	ENSCSEG00000005840	trpt1	86	77.500	Cynoglossus_semilaevis
ENSXMAG00000003142	trpt1	100	82.960	ENSCVAG00000006318	trpt1	95	85.024	Cyprinodon_variegatus
ENSXMAG00000003142	trpt1	92	67.476	ENSDARG00000037628	trpt1	92	66.827	Danio_rerio
ENSXMAG00000003142	trpt1	93	47.442	ENSDNOG00000044923	TRPT1	70	48.485	Dasypus_novemcinctus
ENSXMAG00000003142	trpt1	97	53.913	ENSDORG00000001624	Trpt1	84	56.311	Dipodomys_ordii
ENSXMAG00000003142	trpt1	93	39.524	FBgn0053057	CG33057	94	40.291	Drosophila_melanogaster
ENSXMAG00000003142	trpt1	94	54.245	ENSEBUG00000012569	-	90	54.706	Eptatretus_burgeri
ENSXMAG00000003142	trpt1	97	56.364	ENSEASG00005019983	TRPT1	81	57.971	Equus_asinus_asinus
ENSXMAG00000003142	trpt1	97	55.455	ENSECAG00000009917	TRPT1	89	56.650	Equus_caballus
ENSXMAG00000003142	trpt1	99	57.014	ENSEEUG00000012739	TRPT1	81	58.454	Erinaceus_europaeus
ENSXMAG00000003142	trpt1	93	74.396	ENSELUG00000007385	trpt1	90	74.396	Esox_lucius
ENSXMAG00000003142	trpt1	97	55.066	ENSFCAG00000024621	TRPT1	88	57.143	Felis_catus
ENSXMAG00000003142	trpt1	98	56.364	ENSFDAG00000002738	TRPT1	81	57.971	Fukomys_damarensis
ENSXMAG00000003142	trpt1	93	90.338	ENSFHEG00000002434	trpt1	90	90.338	Fundulus_heteroclitus
ENSXMAG00000003142	trpt1	91	73.267	ENSGMOG00000008716	trpt1	98	73.267	Gadus_morhua
ENSXMAG00000003142	trpt1	90	53.000	ENSGALG00000050256	TRPT1	67	53.000	Gallus_gallus
ENSXMAG00000003142	trpt1	93	95.169	ENSGAFG00000016762	trpt1	92	95.169	Gambusia_affinis
ENSXMAG00000003142	trpt1	90	81.500	ENSGACG00000016927	trpt1	97	81.356	Gasterosteus_aculeatus
ENSXMAG00000003142	trpt1	98	54.464	ENSGGOG00000012163	TRPT1	81	56.796	Gorilla_gorilla
ENSXMAG00000003142	trpt1	93	85.990	ENSHBUG00000012772	trpt1	90	85.990	Haplochromis_burtoni
ENSXMAG00000003142	trpt1	98	56.818	ENSHGLG00000013748	TRPT1	81	58.454	Heterocephalus_glaber_female
ENSXMAG00000003142	trpt1	98	56.818	ENSHGLG00100013048	TRPT1	81	58.454	Heterocephalus_glaber_male
ENSXMAG00000003142	trpt1	92	78.641	ENSHCOG00000000218	trpt1	89	78.641	Hippocampus_comes
ENSXMAG00000003142	trpt1	93	63.768	ENSIPUG00000002573	trpt1	90	63.768	Ictalurus_punctatus
ENSXMAG00000003142	trpt1	99	55.357	ENSSTOG00000014285	TRPT1	81	57.971	Ictidomys_tridecemlineatus
ENSXMAG00000003142	trpt1	97	56.682	ENSJJAG00000010855	Trpt1	83	57.488	Jaculus_jaculus
ENSXMAG00000003142	trpt1	93	84.541	ENSKMAG00000004214	trpt1	90	84.541	Kryptolebias_marmoratus
ENSXMAG00000003142	trpt1	90	84.000	ENSLBEG00000005640	trpt1	88	83.582	Labrus_bergylta
ENSXMAG00000003142	trpt1	92	60.680	ENSLACG00000016922	TRPT1	86	60.287	Latimeria_chalumnae
ENSXMAG00000003142	trpt1	93	64.734	ENSLOCG00000001345	trpt1	84	64.734	Lepisosteus_oculatus
ENSXMAG00000003142	trpt1	92	56.039	ENSLAFG00000009075	TRPT1	81	56.039	Loxodonta_africana
ENSXMAG00000003142	trpt1	98	53.540	ENSMFAG00000036828	TRPT1	81	55.769	Macaca_fascicularis
ENSXMAG00000003142	trpt1	98	54.018	ENSMMUG00000012940	TRPT1	81	56.311	Macaca_mulatta
ENSXMAG00000003142	trpt1	98	53.540	ENSMNEG00000033348	TRPT1	81	55.769	Macaca_nemestrina
ENSXMAG00000003142	trpt1	98	53.097	ENSMLEG00000031438	TRPT1	86	50.769	Mandrillus_leucophaeus
ENSXMAG00000003142	trpt1	93	86.473	ENSMAMG00000021617	trpt1	90	86.473	Mastacembelus_armatus
ENSXMAG00000003142	trpt1	93	85.990	ENSMZEG00005004773	trpt1	90	85.990	Maylandia_zebra
ENSXMAG00000003142	trpt1	76	58.140	ENSMAUG00000014107	Trpt1	82	58.140	Mesocricetus_auratus
ENSXMAG00000003142	trpt1	97	55.708	ENSMICG00000016950	TRPT1	81	57.005	Microcebus_murinus
ENSXMAG00000003142	trpt1	97	59.009	ENSMOCG00000021342	Trpt1	82	60.386	Microtus_ochrogaster
ENSXMAG00000003142	trpt1	90	83.000	ENSMMOG00000002896	trpt1	86	82.587	Mola_mola
ENSXMAG00000003142	trpt1	93	57.619	ENSMODG00000010226	TRPT1	89	59.391	Monodelphis_domestica
ENSXMAG00000003142	trpt1	93	85.096	ENSMALG00000012208	trpt1	84	85.096	Monopterus_albus
ENSXMAG00000003142	trpt1	99	54.222	MGP_CAROLIEiJ_G0022627	Trpt1	82	56.796	Mus_caroli
ENSXMAG00000003142	trpt1	99	54.222	ENSMUSG00000047656	Trpt1	82	56.796	Mus_musculus
ENSXMAG00000003142	trpt1	99	54.867	MGP_PahariEiJ_G0014121	Trpt1	82	57.005	Mus_pahari
ENSXMAG00000003142	trpt1	99	54.667	MGP_SPRETEiJ_G0023537	Trpt1	82	57.282	Mus_spretus
ENSXMAG00000003142	trpt1	98	57.018	ENSMPUG00000013272	TRPT1	75	59.135	Mustela_putorius_furo
ENSXMAG00000003142	trpt1	92	57.971	ENSMLUG00000024858	TRPT1	81	57.971	Myotis_lucifugus
ENSXMAG00000003142	trpt1	81	56.044	ENSNGAG00000007665	Trpt1	88	56.044	Nannospalax_galili
ENSXMAG00000003142	trpt1	93	81.081	ENSNBRG00000001528	trpt1	91	81.081	Neolamprologus_brichardi
ENSXMAG00000003142	trpt1	91	45.366	ENSNLEG00000033525	-	88	45.055	Nomascus_leucogenys
ENSXMAG00000003142	trpt1	92	57.282	ENSMEUG00000000943	TRPT1	81	57.282	Notamacropus_eugenii
ENSXMAG00000003142	trpt1	95	57.075	ENSOPRG00000015917	TRPT1	80	58.416	Ochotona_princeps
ENSXMAG00000003142	trpt1	99	55.603	ENSODEG00000015724	TRPT1	83	59.135	Octodon_degus
ENSXMAG00000003142	trpt1	93	84.541	ENSONIG00000005333	trpt1	90	84.541	Oreochromis_niloticus
ENSXMAG00000003142	trpt1	90	49.261	ENSOANG00000010375	TRPT1	89	49.261	Ornithorhynchus_anatinus
ENSXMAG00000003142	trpt1	97	55.300	ENSOCUG00000022244	TRPT1	82	56.522	Oryctolagus_cuniculus
ENSXMAG00000003142	trpt1	98	82.110	ENSORLG00000025159	trpt1	93	83.981	Oryzias_latipes
ENSXMAG00000003142	trpt1	99	81.614	ENSORLG00020018944	trpt1	92	83.981	Oryzias_latipes_hni
ENSXMAG00000003142	trpt1	86	81.152	ENSORLG00015017108	trpt1	85	81.152	Oryzias_latipes_hsok
ENSXMAG00000003142	trpt1	100	80.357	ENSOMEG00000018645	trpt1	92	83.575	Oryzias_melastigma
ENSXMAG00000003142	trpt1	94	57.619	ENSOGAG00000007134	TRPT1	81	58.654	Otolemur_garnettii
ENSXMAG00000003142	trpt1	98	55.455	ENSOARG00000004961	TRPT1	81	57.005	Ovis_aries
ENSXMAG00000003142	trpt1	81	56.354	ENSPPAG00000027600	TRPT1	88	56.354	Pan_paniscus
ENSXMAG00000003142	trpt1	81	57.692	ENSPPRG00000022870	TRPT1	88	57.692	Panthera_pardus
ENSXMAG00000003142	trpt1	77	58.382	ENSPTIG00000018872	TRPT1	84	58.382	Panthera_tigris_altaica
ENSXMAG00000003142	trpt1	81	56.354	ENSPTRG00000003822	TRPT1	88	56.354	Pan_troglodytes
ENSXMAG00000003142	trpt1	98	53.097	ENSPANG00000011001	TRPT1	81	55.288	Papio_anubis
ENSXMAG00000003142	trpt1	92	68.447	ENSPKIG00000008323	trpt1	89	68.447	Paramormyrops_kingsleyae
ENSXMAG00000003142	trpt1	98	56.109	ENSPSIG00000009910	TRPT1	86	57.282	Pelodiscus_sinensis
ENSXMAG00000003142	trpt1	95	75.472	ENSPMGG00000005037	trpt1	89	77.000	Periophthalmus_magnuspinnatus
ENSXMAG00000003142	trpt1	99	55.856	ENSPEMG00000013720	Trpt1	82	57.971	Peromyscus_maniculatus_bairdii
ENSXMAG00000003142	trpt1	91	53.431	ENSPMAG00000001449	trpt1	98	53.431	Petromyzon_marinus
ENSXMAG00000003142	trpt1	92	59.223	ENSPCIG00000008060	TRPT1	83	59.223	Phascolarctos_cinereus
ENSXMAG00000003142	trpt1	99	96.396	ENSPFOG00000009475	trpt1	98	96.396	Poecilia_formosa
ENSXMAG00000003142	trpt1	93	96.135	ENSPMEG00000003682	trpt1	92	96.135	Poecilia_mexicana
ENSXMAG00000003142	trpt1	93	96.135	ENSPREG00000015408	trpt1	92	96.135	Poecilia_reticulata
ENSXMAG00000003142	trpt1	92	56.311	ENSPPYG00000003116	TRPT1	81	56.311	Pongo_abelii
ENSXMAG00000003142	trpt1	92	56.796	ENSPCAG00000000762	TRPT1	81	56.796	Procavia_capensis
ENSXMAG00000003142	trpt1	97	55.708	ENSPCOG00000010370	TRPT1	81	57.005	Propithecus_coquereli
ENSXMAG00000003142	trpt1	93	79.730	ENSPNYG00000014805	trpt1	91	79.730	Pundamilia_nyererei
ENSXMAG00000003142	trpt1	93	68.116	ENSPNAG00000008548	trpt1	91	68.116	Pygocentrus_nattereri
ENSXMAG00000003142	trpt1	99	53.540	ENSRNOG00000023023	Trpt1	83	56.039	Rattus_norvegicus
ENSXMAG00000003142	trpt1	97	53.881	ENSRBIG00000040432	TRPT1	81	54.854	Rhinopithecus_bieti
ENSXMAG00000003142	trpt1	97	54.795	ENSRROG00000044905	TRPT1	81	55.825	Rhinopithecus_roxellana
ENSXMAG00000003142	trpt1	81	36.898	YOL102C	TPT1	80	36.898	Saccharomyces_cerevisiae
ENSXMAG00000003142	trpt1	98	54.222	ENSSBOG00000021466	TRPT1	81	56.522	Saimiri_boliviensis_boliviensis
ENSXMAG00000003142	trpt1	93	69.082	ENSSFOG00015005844	trpt1	92	69.082	Scleropages_formosus
ENSXMAG00000003142	trpt1	93	82.692	ENSSMAG00000017744	trpt1	92	82.692	Scophthalmus_maximus
ENSXMAG00000003142	trpt1	93	85.990	ENSSDUG00000017106	trpt1	92	85.990	Seriola_dumerili
ENSXMAG00000003142	trpt1	90	84.500	ENSSLDG00000015957	trpt1	83	85.340	Seriola_lalandi_dorsalis
ENSXMAG00000003142	trpt1	85	82.632	ENSSPAG00000007557	trpt1	75	82.632	Stegastes_partitus
ENSXMAG00000003142	trpt1	97	56.682	ENSSSCG00000013040	TRPT1	79	57.971	Sus_scrofa
ENSXMAG00000003142	trpt1	92	83.010	ENSTRUG00000023723	trpt1	89	83.010	Takifugu_rubripes
ENSXMAG00000003142	trpt1	92	80.583	ENSTNIG00000003381	trpt1	89	80.583	Tetraodon_nigroviridis
ENSXMAG00000003142	trpt1	92	54.369	ENSTBEG00000006023	TRPT1	81	54.369	Tupaia_belangeri
ENSXMAG00000003142	trpt1	98	54.545	ENSTTRG00000010252	TRPT1	81	56.039	Tursiops_truncatus
ENSXMAG00000003142	trpt1	97	56.621	ENSUAMG00000015208	TRPT1	81	57.971	Ursus_americanus
ENSXMAG00000003142	trpt1	97	56.621	ENSUMAG00000001410	TRPT1	81	57.971	Ursus_maritimus
ENSXMAG00000003142	trpt1	92	57.971	ENSVVUG00000029774	TRPT1	84	57.971	Vulpes_vulpes
ENSXMAG00000003142	trpt1	100	59.292	ENSXETG00000007196	trpt1	89	61.058	Xenopus_tropicalis
ENSXMAG00000003142	trpt1	100	95.516	ENSXCOG00000001614	trpt1	96	95.516	Xiphophorus_couchianus