EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003147 (Gene tree)
Gene ID: 102222453
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 1764 bases
Position: chr23:13681335-13683098
Accession: 102222453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003150	RNase_H2_suC	PF08615.11	2.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003155	-	521	XM_005806531	ENSXMAP00000003150	164 (aa)	XP_005806588	M3ZLQ8

Gene Model

Click here to download ENSXMAG00000003147's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003147	rnaseh2c	83	85.294	ENSAPOG00000012901	rnaseh2c	99	85.294	Acanthochromis_polyacanthus
ENSXMAG00000003147	rnaseh2c	83	78.676	ENSACIG00000022433	rnaseh2c	100	78.676	Amphilophus_citrinellus
ENSXMAG00000003147	rnaseh2c	83	84.559	ENSAOCG00000016855	rnaseh2c	100	84.559	Amphiprion_ocellaris
ENSXMAG00000003147	rnaseh2c	87	82.517	ENSAPEG00000009850	rnaseh2c	100	85.294	Amphiprion_percula
ENSXMAG00000003147	rnaseh2c	83	81.618	ENSATEG00000014395	rnaseh2c	100	81.618	Anabas_testudineus
ENSXMAG00000003147	rnaseh2c	83	77.941	ENSACLG00000016950	rnaseh2c	100	77.941	Astatotilapia_calliptera
ENSXMAG00000003147	rnaseh2c	82	68.148	ENSAMXG00000001210	rnaseh2c	100	68.148	Astyanax_mexicanus
ENSXMAG00000003147	rnaseh2c	82	53.731	ENSCPBG00000023408	-	96	53.731	Chrysemys_picta_bellii
ENSXMAG00000003147	rnaseh2c	83	78.676	ENSCSEG00000005808	rnaseh2c	99	78.676	Cynoglossus_semilaevis
ENSXMAG00000003147	rnaseh2c	83	94.118	ENSCVAG00000006337	rnaseh2c	100	94.118	Cyprinodon_variegatus
ENSXMAG00000003147	rnaseh2c	83	66.912	ENSDARG00000089637	rnaseh2c	99	66.912	Danio_rerio
ENSXMAG00000003147	rnaseh2c	65	52.778	ENSEBUG00000014939	rnaseh2c	69	50.000	Eptatretus_burgeri
ENSXMAG00000003147	rnaseh2c	82	68.148	ENSELUG00000007345	rnaseh2c	99	68.148	Esox_lucius
ENSXMAG00000003147	rnaseh2c	79	95.349	ENSFHEG00000002419	rnaseh2c	95	94.615	Fundulus_heteroclitus
ENSXMAG00000003147	rnaseh2c	55	74.444	ENSGMOG00000008727	rnaseh2c	100	74.444	Gadus_morhua
ENSXMAG00000003147	rnaseh2c	100	96.341	ENSGAFG00000016755	rnaseh2c	100	96.341	Gambusia_affinis
ENSXMAG00000003147	rnaseh2c	82	53.731	ENSGAGG00000008193	-	96	53.731	Gopherus_agassizii
ENSXMAG00000003147	rnaseh2c	83	79.412	ENSHBUG00000012806	rnaseh2c	100	79.412	Haplochromis_burtoni
ENSXMAG00000003147	rnaseh2c	83	73.529	ENSHCOG00000007177	rnaseh2c	100	73.529	Hippocampus_comes
ENSXMAG00000003147	rnaseh2c	83	64.706	ENSIPUG00000018044	rnaseh2c	100	64.706	Ictalurus_punctatus
ENSXMAG00000003147	rnaseh2c	83	80.882	ENSKMAG00000004184	rnaseh2c	100	80.882	Kryptolebias_marmoratus
ENSXMAG00000003147	rnaseh2c	83	80.292	ENSLBEG00000005742	rnaseh2c	100	80.292	Labrus_bergylta
ENSXMAG00000003147	rnaseh2c	79	57.364	ENSLACG00000010120	-	93	56.818	Latimeria_chalumnae
ENSXMAG00000003147	rnaseh2c	83	76.471	ENSMAMG00000021610	rnaseh2c	100	76.471	Mastacembelus_armatus
ENSXMAG00000003147	rnaseh2c	83	78.676	ENSMZEG00005004796	rnaseh2c	100	78.676	Maylandia_zebra
ENSXMAG00000003147	rnaseh2c	83	80.882	ENSMMOG00000002869	rnaseh2c	100	80.882	Mola_mola
ENSXMAG00000003147	rnaseh2c	83	82.482	ENSMALG00000012198	rnaseh2c	100	82.482	Monopterus_albus
ENSXMAG00000003147	rnaseh2c	83	79.412	ENSNBRG00000001462	rnaseh2c	100	79.412	Neolamprologus_brichardi
ENSXMAG00000003147	rnaseh2c	84	78.832	ENSONIG00000005338	rnaseh2c	100	78.832	Oreochromis_niloticus
ENSXMAG00000003147	rnaseh2c	83	75.000	ENSORLG00000023473	rnaseh2c	100	75.000	Oryzias_latipes
ENSXMAG00000003147	rnaseh2c	84	74.453	ENSORLG00020019053	rnaseh2c	92	74.453	Oryzias_latipes_hni
ENSXMAG00000003147	rnaseh2c	84	76.642	ENSORLG00015017067	rnaseh2c	92	76.642	Oryzias_latipes_hsok
ENSXMAG00000003147	rnaseh2c	83	74.265	ENSOMEG00000018607	rnaseh2c	100	74.265	Oryzias_melastigma
ENSXMAG00000003147	rnaseh2c	83	58.824	ENSPKIG00000019331	rnaseh2c	100	58.824	Paramormyrops_kingsleyae
ENSXMAG00000003147	rnaseh2c	83	91.912	ENSPFOG00000009415	rnaseh2c	100	91.912	Poecilia_formosa
ENSXMAG00000003147	rnaseh2c	83	93.382	ENSPLAG00000023330	rnaseh2c	100	93.382	Poecilia_latipinna
ENSXMAG00000003147	rnaseh2c	83	91.912	ENSPMEG00000003696	rnaseh2c	100	91.912	Poecilia_mexicana
ENSXMAG00000003147	rnaseh2c	91	86.335	ENSPREG00000015384	rnaseh2c	80	85.093	Poecilia_reticulata
ENSXMAG00000003147	rnaseh2c	83	79.412	ENSPNYG00000014766	rnaseh2c	100	79.412	Pundamilia_nyererei
ENSXMAG00000003147	rnaseh2c	82	65.926	ENSPNAG00000019111	rnaseh2c	99	65.926	Pygocentrus_nattereri
ENSXMAG00000003147	rnaseh2c	82	66.667	ENSSFOG00015005760	rnaseh2c	99	66.667	Scleropages_formosus
ENSXMAG00000003147	rnaseh2c	83	79.412	ENSSMAG00000017738	rnaseh2c	100	79.412	Scophthalmus_maximus
ENSXMAG00000003147	rnaseh2c	83	81.618	ENSSDUG00000017285	rnaseh2c	100	81.618	Seriola_dumerili
ENSXMAG00000003147	rnaseh2c	83	83.088	ENSSLDG00000016030	rnaseh2c	100	83.088	Seriola_lalandi_dorsalis
ENSXMAG00000003147	rnaseh2c	79	50.376	ENSSPUG00000000842	-	89	49.265	Sphenodon_punctatus
ENSXMAG00000003147	rnaseh2c	83	80.882	ENSSPAG00000007536	rnaseh2c	100	80.882	Stegastes_partitus
ENSXMAG00000003147	rnaseh2c	83	72.794	ENSTRUG00000021845	rnaseh2c	100	72.794	Takifugu_rubripes
ENSXMAG00000003147	rnaseh2c	83	77.941	ENSTNIG00000000431	rnaseh2c	100	77.941	Tetraodon_nigroviridis
ENSXMAG00000003147	rnaseh2c	82	47.761	ENSXETG00000032466	-	98	47.761	Xenopus_tropicalis
ENSXMAG00000003147	rnaseh2c	83	96.324	ENSXCOG00000001611	rnaseh2c	100	96.324	Xiphophorus_couchianus