EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003191 (Gene tree)
Gene ID: 102224192
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8977 bases
Position: chr4:17487381-17496357
Accession: 102224192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000028981	tRNA_anti-codon	PF01336.25	4.4e-13	1	1
ENSXMAP00000003217	tRNA_anti-codon	PF01336.25	5e-13	1	1
ENSXMAP00000028981	tRNA-synt_2	PF00152.20	9.2e-79	1	1
ENSXMAP00000003217	tRNA-synt_2	PF00152.20	1.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000037719	-	2499	XM_005810419	ENSXMAP00000028981	577 (aa)	XP_005810476	UPI0003B379E4
ENSXMAT00000003222	-	2623	XM_005810418	ENSXMAP00000003217	609 (aa)	XP_005810475	M3ZLX5

Gene Model

Click here to download ENSXMAG00000003191's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003191's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003191	kars	99	79.518	ENSG00000065427	KARS	100	88.235	Homo_sapiens
ENSXMAG00000003191	kars	99	89.309	ENSAPOG00000010997	kars	99	88.980	Acanthochromis_polyacanthus
ENSXMAG00000003191	kars	99	77.568	ENSAMEG00000005347	KARS	93	77.568	Ailuropoda_melanoleuca
ENSXMAG00000003191	kars	99	87.175	ENSACIG00000000304	kars	99	86.632	Amphilophus_citrinellus
ENSXMAG00000003191	kars	97	91.297	ENSAOCG00000012971	kars	98	91.017	Amphiprion_ocellaris
ENSXMAG00000003191	kars	99	90.988	ENSAPEG00000011144	kars	99	90.988	Amphiprion_percula
ENSXMAG00000003191	kars	99	89.081	ENSATEG00000004954	kars	99	88.908	Anabas_testudineus
ENSXMAG00000003191	kars	93	80.297	ENSAPLG00000012705	KARS	97	80.748	Anas_platyrhynchos
ENSXMAG00000003191	kars	98	77.758	ENSACAG00000007577	KARS	90	77.758	Anolis_carolinensis
ENSXMAG00000003191	kars	99	79.518	ENSANAG00000030403	-	97	79.518	Aotus_nancymaae
ENSXMAG00000003191	kars	97	66.143	ENSANAG00000031739	-	94	65.841	Aotus_nancymaae
ENSXMAG00000003191	kars	99	92.201	ENSACLG00000001613	kars	99	91.612	Astatotilapia_calliptera
ENSXMAG00000003191	kars	99	88.215	ENSAMXG00000030719	kars	99	88.215	Astyanax_mexicanus
ENSXMAG00000003191	kars	99	79.281	ENSBTAG00000015677	KARS	75	79.281	Bos_taurus
ENSXMAG00000003191	kars	97	60.498	WBGene00002238	kars-1	97	63.600	Caenorhabditis_elegans
ENSXMAG00000003191	kars	99	79.966	ENSCJAG00000014213	KARS	98	79.966	Callithrix_jacchus
ENSXMAG00000003191	kars	99	78.596	ENSCAFG00000020069	KARS	93	78.596	Canis_familiaris
ENSXMAG00000003191	kars	99	80.000	ENSCAFG00020001721	KARS	96	80.000	Canis_lupus_dingo
ENSXMAG00000003191	kars	96	78.929	ENSCHIG00000016073	-	93	78.929	Capra_hircus
ENSXMAG00000003191	kars	99	79.725	ENSCHIG00000014108	-	98	79.725	Capra_hircus
ENSXMAG00000003191	kars	98	81.086	ENSTSYG00000001643	KARS	97	80.817	Carlito_syrichta
ENSXMAG00000003191	kars	98	73.601	ENSCAPG00000016234	KARS	96	73.860	Cavia_aperea
ENSXMAG00000003191	kars	99	79.966	ENSCPOG00000012036	KARS	98	79.966	Cavia_porcellus
ENSXMAG00000003191	kars	99	79.862	ENSCCAG00000034307	-	97	79.690	Cebus_capucinus
ENSXMAG00000003191	kars	93	64.835	ENSCCAG00000030337	-	99	64.378	Cebus_capucinus
ENSXMAG00000003191	kars	99	78.646	ENSCATG00000038129	KARS	97	78.646	Cercocebus_atys
ENSXMAG00000003191	kars	99	78.793	ENSCLAG00000007905	KARS	97	78.966	Chinchilla_lanigera
ENSXMAG00000003191	kars	97	78.521	ENSCSAG00000003664	KARS	91	78.697	Chlorocebus_sabaeus
ENSXMAG00000003191	kars	79	85.120	ENSCHOG00000013447	KARS	73	85.120	Choloepus_hoffmanni
ENSXMAG00000003191	kars	99	80.208	ENSCPBG00000026969	KARS	97	79.861	Chrysemys_picta_bellii
ENSXMAG00000003191	kars	93	69.907	ENSCPBG00000002553	-	94	71.676	Chrysemys_picta_bellii
ENSXMAG00000003191	kars	99	67.591	ENSCING00000009513	-	100	67.591	Ciona_intestinalis
ENSXMAG00000003191	kars	98	69.435	ENSCSAVG00000007684	-	98	69.435	Ciona_savignyi
ENSXMAG00000003191	kars	55	72.812	ENSCSAVG00000001136	-	100	73.180	Ciona_savignyi
ENSXMAG00000003191	kars	98	75.567	ENSCANG00000032813	KARS	96	75.567	Colobus_angolensis_palliatus
ENSXMAG00000003191	kars	99	80.484	ENSCGRG00001004055	KARS	97	80.311	Cricetulus_griseus_chok1gshd
ENSXMAG00000003191	kars	99	80.484	ENSCGRG00000014242	KARS	97	80.311	Cricetulus_griseus_crigri
ENSXMAG00000003191	kars	99	91.289	ENSCSEG00000008324	kars	99	91.289	Cynoglossus_semilaevis
ENSXMAG00000003191	kars	99	95.079	ENSCVAG00000019686	kars	99	95.079	Cyprinodon_variegatus
ENSXMAG00000003191	kars	99	87.500	ENSDARG00000103799	kars	99	90.467	Danio_rerio
ENSXMAG00000003191	kars	97	80.106	ENSDNOG00000002241	KARS	91	80.282	Dasypus_novemcinctus
ENSXMAG00000003191	kars	99	79.138	ENSDORG00000004780	-	97	79.138	Dipodomys_ordii
ENSXMAG00000003191	kars	96	62.523	ENSDORG00000024214	-	96	62.523	Dipodomys_ordii
ENSXMAG00000003191	kars	98	70.899	FBgn0027084	LysRS	98	70.370	Drosophila_melanogaster
ENSXMAG00000003191	kars	99	78.938	ENSETEG00000008353	KARS	92	79.585	Echinops_telfairi
ENSXMAG00000003191	kars	99	70.761	ENSEBUG00000001284	-	99	70.761	Eptatretus_burgeri
ENSXMAG00000003191	kars	97	81.416	ENSEASG00005013497	KARS	95	81.416	Equus_asinus_asinus
ENSXMAG00000003191	kars	97	81.416	ENSECAG00000013424	KARS	95	81.416	Equus_caballus
ENSXMAG00000003191	kars	99	72.964	ENSEEUG00000007042	KARS	94	72.260	Erinaceus_europaeus
ENSXMAG00000003191	kars	97	81.350	ENSELUG00000014575	kars	96	81.172	Esox_lucius
ENSXMAG00000003191	kars	99	79.688	ENSFCAG00000008573	KARS	97	79.210	Felis_catus
ENSXMAG00000003191	kars	99	78.061	ENSFALG00000002543	KARS	99	78.061	Ficedula_albicollis
ENSXMAG00000003191	kars	99	79.138	ENSFDAG00000007155	KARS	97	79.138	Fukomys_damarensis
ENSXMAG00000003191	kars	100	93.414	ENSFHEG00000006172	kars	100	93.414	Fundulus_heteroclitus
ENSXMAG00000003191	kars	98	87.478	ENSGMOG00000002633	kars	99	85.621	Gadus_morhua
ENSXMAG00000003191	kars	99	79.447	ENSGALG00000000907	KARS	99	79.965	Gallus_gallus
ENSXMAG00000003191	kars	100	98.440	ENSGAFG00000017252	kars	100	98.440	Gambusia_affinis
ENSXMAG00000003191	kars	99	89.655	ENSGACG00000015749	kars	99	88.725	Gasterosteus_aculeatus
ENSXMAG00000003191	kars	99	80.696	ENSGAGG00000023836	KARS	97	80.348	Gopherus_agassizii
ENSXMAG00000003191	kars	91	71.048	ENSGAGG00000011960	-	97	71.735	Gopherus_agassizii
ENSXMAG00000003191	kars	99	79.346	ENSGGOG00000005515	KARS	97	79.346	Gorilla_gorilla
ENSXMAG00000003191	kars	99	92.201	ENSHBUG00000013619	kars	99	91.612	Haplochromis_burtoni
ENSXMAG00000003191	kars	99	64.846	ENSHGLG00000001298	-	97	64.676	Heterocephalus_glaber_female
ENSXMAG00000003191	kars	99	71.379	ENSHGLG00000015235	-	97	71.379	Heterocephalus_glaber_female
ENSXMAG00000003191	kars	99	79.483	ENSHGLG00000011898	KARS	98	79.894	Heterocephalus_glaber_female
ENSXMAG00000003191	kars	99	71.207	ENSHGLG00100012523	-	91	77.893	Heterocephalus_glaber_male
ENSXMAG00000003191	kars	99	64.676	ENSHGLG00100006466	-	97	64.505	Heterocephalus_glaber_male
ENSXMAG00000003191	kars	99	79.483	ENSHGLG00100012264	KARS	97	79.483	Heterocephalus_glaber_male
ENSXMAG00000003191	kars	99	89.601	ENSHCOG00000002900	kars	96	89.601	Hippocampus_comes
ENSXMAG00000003191	kars	99	89.410	ENSIPUG00000009862	kars	99	89.236	Ictalurus_punctatus
ENSXMAG00000003191	kars	99	79.549	ENSSTOG00000004205	KARS	97	79.549	Ictidomys_tridecemlineatus
ENSXMAG00000003191	kars	99	79.652	ENSJJAG00000020406	Kars	97	79.478	Jaculus_jaculus
ENSXMAG00000003191	kars	100	91.522	ENSKMAG00000006434	kars	100	91.522	Kryptolebias_marmoratus
ENSXMAG00000003191	kars	99	91.854	ENSLBEG00000026537	kars	99	90.312	Labrus_bergylta
ENSXMAG00000003191	kars	98	81.228	ENSLACG00000006667	KARS	93	80.870	Latimeria_chalumnae
ENSXMAG00000003191	kars	88	75.296	ENSLACG00000016399	-	99	75.296	Latimeria_chalumnae
ENSXMAG00000003191	kars	94	68.324	ENSLOCG00000013608	-	99	68.324	Lepisosteus_oculatus
ENSXMAG00000003191	kars	99	87.197	ENSLOCG00000004002	kars	99	87.197	Lepisosteus_oculatus
ENSXMAG00000003191	kars	98	78.596	ENSLAFG00000015340	KARS	92	78.772	Loxodonta_africana
ENSXMAG00000003191	kars	99	78.313	ENSMFAG00000040024	KARS	97	78.313	Macaca_fascicularis
ENSXMAG00000003191	kars	99	78.313	ENSMNEG00000042879	-	97	78.313	Macaca_nemestrina
ENSXMAG00000003191	kars	87	76.621	ENSMNEG00000035832	-	98	76.621	Macaca_nemestrina
ENSXMAG00000003191	kars	99	78.313	ENSMLEG00000034947	KARS	97	78.313	Mandrillus_leucophaeus
ENSXMAG00000003191	kars	98	91.489	ENSMAMG00000021559	kars	99	90.312	Mastacembelus_armatus
ENSXMAG00000003191	kars	99	92.201	ENSMZEG00005014382	kars	99	91.612	Maylandia_zebra
ENSXMAG00000003191	kars	95	80.399	ENSMGAG00000009000	KARS	98	80.399	Meleagris_gallopavo
ENSXMAG00000003191	kars	99	80.517	ENSMICG00000011997	KARS	97	80.517	Microcebus_murinus
ENSXMAG00000003191	kars	99	77.375	ENSMOCG00000019029	-	97	77.375	Microtus_ochrogaster
ENSXMAG00000003191	kars	99	80.311	ENSMOCG00000011829	Kars	97	80.311	Microtus_ochrogaster
ENSXMAG00000003191	kars	97	90.374	ENSMMOG00000016934	kars	99	90.374	Mola_mola
ENSXMAG00000003191	kars	99	73.565	ENSMODG00000002238	-	93	73.217	Monodelphis_domestica
ENSXMAG00000003191	kars	96	78.036	ENSMODG00000002215	-	97	78.214	Monodelphis_domestica
ENSXMAG00000003191	kars	99	89.601	ENSMALG00000020858	kars	100	88.737	Monopterus_albus
ENSXMAG00000003191	kars	85	80.688	MGP_CAROLIEiJ_G0031588	Kars	97	80.688	Mus_caroli
ENSXMAG00000003191	kars	99	81.520	ENSMUSG00000031948	Kars	97	81.347	Mus_musculus
ENSXMAG00000003191	kars	99	81.002	MGP_PahariEiJ_G0023186	Kars	97	81.002	Mus_pahari
ENSXMAG00000003191	kars	99	81.347	MGP_SPRETEiJ_G0032706	Kars	97	81.174	Mus_spretus
ENSXMAG00000003191	kars	99	78.120	ENSMPUG00000009871	KARS	94	78.120	Mustela_putorius_furo
ENSXMAG00000003191	kars	80	53.034	ENSMLUG00000026871	-	93	53.034	Myotis_lucifugus
ENSXMAG00000003191	kars	98	80.844	ENSMLUG00000015119	-	95	80.316	Myotis_lucifugus
ENSXMAG00000003191	kars	99	80.104	ENSNGAG00000018820	-	97	80.104	Nannospalax_galili
ENSXMAG00000003191	kars	95	79.676	ENSNGAG00000022944	-	95	79.676	Nannospalax_galili
ENSXMAG00000003191	kars	99	91.840	ENSNBRG00000011098	kars	98	91.667	Neolamprologus_brichardi
ENSXMAG00000003191	kars	99	79.346	ENSNLEG00000013072	KARS	97	79.346	Nomascus_leucogenys
ENSXMAG00000003191	kars	97	76.744	ENSMEUG00000008684	KARS	91	76.923	Notamacropus_eugenii
ENSXMAG00000003191	kars	97	79.718	ENSOPRG00000012544	KARS	93	79.894	Ochotona_princeps
ENSXMAG00000003191	kars	98	56.714	ENSODEG00000009464	-	99	56.537	Octodon_degus
ENSXMAG00000003191	kars	99	79.655	ENSODEG00000013099	-	98	79.682	Octodon_degus
ENSXMAG00000003191	kars	99	92.028	ENSONIG00000005937	kars	99	91.493	Oreochromis_niloticus
ENSXMAG00000003191	kars	97	80.565	ENSOANG00000008179	KARS	95	80.531	Ornithorhynchus_anatinus
ENSXMAG00000003191	kars	99	73.793	ENSOCUG00000015553	KARS	97	73.966	Oryctolagus_cuniculus
ENSXMAG00000003191	kars	100	87.705	ENSORLG00000007627	kars	99	87.705	Oryzias_latipes
ENSXMAG00000003191	kars	100	87.705	ENSORLG00020010056	kars	99	87.705	Oryzias_latipes_hni
ENSXMAG00000003191	kars	100	87.705	ENSORLG00015008179	kars	99	87.705	Oryzias_latipes_hsok
ENSXMAG00000003191	kars	100	90.311	ENSOMEG00000001710	kars	99	90.311	Oryzias_melastigma
ENSXMAG00000003191	kars	99	73.801	ENSOGAG00000005903	KARS	93	73.801	Otolemur_garnettii
ENSXMAG00000003191	kars	93	79.197	ENSOARG00000006928	KARS	96	79.197	Ovis_aries
ENSXMAG00000003191	kars	99	79.174	ENSPPAG00000036192	KARS	97	79.174	Pan_paniscus
ENSXMAG00000003191	kars	99	79.861	ENSPPRG00000003027	KARS	97	79.346	Panthera_pardus
ENSXMAG00000003191	kars	99	79.688	ENSPTIG00000008011	KARS	97	79.174	Panthera_tigris_altaica
ENSXMAG00000003191	kars	99	79.346	ENSPTRG00000008364	KARS	97	79.346	Pan_troglodytes
ENSXMAG00000003191	kars	99	78.485	ENSPANG00000024106	KARS	91	78.873	Papio_anubis
ENSXMAG00000003191	kars	99	87.370	ENSPKIG00000009896	kars	99	87.370	Paramormyrops_kingsleyae
ENSXMAG00000003191	kars	97	80.179	ENSPSIG00000009294	KARS	96	80.357	Pelodiscus_sinensis
ENSXMAG00000003191	kars	90	72.222	ENSPSIG00000003041	-	94	73.152	Pelodiscus_sinensis
ENSXMAG00000003191	kars	97	92.143	ENSPMGG00000006117	kars	99	91.964	Periophthalmus_magnuspinnatus
ENSXMAG00000003191	kars	99	80.345	ENSPEMG00000012277	Kars	97	80.345	Peromyscus_maniculatus_bairdii
ENSXMAG00000003191	kars	97	74.423	ENSPMAG00000008360	-	91	74.245	Petromyzon_marinus
ENSXMAG00000003191	kars	99	79.130	ENSPCIG00000010761	-	97	79.130	Phascolarctos_cinereus
ENSXMAG00000003191	kars	97	76.840	ENSPCIG00000025469	-	90	77.020	Phascolarctos_cinereus
ENSXMAG00000003191	kars	100	97.701	ENSPFOG00000013253	kars	100	97.701	Poecilia_formosa
ENSXMAG00000003191	kars	100	97.747	ENSPLAG00000004189	kars	100	97.747	Poecilia_latipinna
ENSXMAG00000003191	kars	100	97.920	ENSPMEG00000015698	kars	100	97.920	Poecilia_mexicana
ENSXMAG00000003191	kars	100	97.574	ENSPREG00000023179	kars	100	97.574	Poecilia_reticulata
ENSXMAG00000003191	kars	97	79.401	ENSPPYG00000007567	KARS	91	79.577	Pongo_abelii
ENSXMAG00000003191	kars	89	75.244	ENSPCAG00000010790	KARS	98	75.244	Procavia_capensis
ENSXMAG00000003191	kars	98	74.472	ENSPCOG00000003166	KARS	96	74.472	Propithecus_coquereli
ENSXMAG00000003191	kars	97	80.458	ENSPVAG00000006746	KARS	97	76.557	Pteropus_vampyrus
ENSXMAG00000003191	kars	99	92.201	ENSPNYG00000013095	kars	99	91.612	Pundamilia_nyererei
ENSXMAG00000003191	kars	99	89.081	ENSPNAG00000013828	kars	99	89.081	Pygocentrus_nattereri
ENSXMAG00000003191	kars	97	80.141	ENSRNOG00000019456	Kars	91	80.492	Rattus_norvegicus
ENSXMAG00000003191	kars	99	78.299	ENSRBIG00000030118	KARS	97	78.299	Rhinopithecus_bieti
ENSXMAG00000003191	kars	99	78.299	ENSRROG00000041418	KARS	97	78.299	Rhinopithecus_roxellana
ENSXMAG00000003191	kars	98	55.420	YDR037W	KRS1	96	55.594	Saccharomyces_cerevisiae
ENSXMAG00000003191	kars	78	34.526	YNL073W	-	82	34.526	Saccharomyces_cerevisiae
ENSXMAG00000003191	kars	99	79.690	ENSSBOG00000019255	KARS	98	80.177	Saimiri_boliviensis_boliviensis
ENSXMAG00000003191	kars	97	74.035	ENSSHAG00000001359	-	98	74.211	Sarcophilus_harrisii
ENSXMAG00000003191	kars	91	70.245	ENSSHAG00000009005	-	92	71.456	Sarcophilus_harrisii
ENSXMAG00000003191	kars	97	65.836	ENSSHAG00000002050	-	90	66.014	Sarcophilus_harrisii
ENSXMAG00000003191	kars	96	88.869	ENSSFOG00015014837	kars	99	88.869	Scleropages_formosus
ENSXMAG00000003191	kars	99	90.988	ENSSMAG00000021441	kars	99	90.988	Scophthalmus_maximus
ENSXMAG00000003191	kars	99	92.548	ENSSDUG00000001202	kars	99	92.548	Seriola_dumerili
ENSXMAG00000003191	kars	97	92.185	ENSSLDG00000021220	kars	98	92.362	Seriola_lalandi_dorsalis
ENSXMAG00000003191	kars	76	83.929	ENSSARG00000011493	KARS	77	83.929	Sorex_araneus
ENSXMAG00000003191	kars	65	64.879	ENSSPUG00000000449	-	83	67.887	Sphenodon_punctatus
ENSXMAG00000003191	kars	99	79.452	ENSSPUG00000004974	KARS	98	78.938	Sphenodon_punctatus
ENSXMAG00000003191	kars	99	91.297	ENSSPAG00000020365	kars	97	91.993	Stegastes_partitus
ENSXMAG00000003191	kars	99	79.381	ENSSSCG00000002704	KARS	97	79.381	Sus_scrofa
ENSXMAG00000003191	kars	97	79.821	ENSTGUG00000008400	KARS	100	79.821	Taeniopygia_guttata
ENSXMAG00000003191	kars	98	86.856	ENSTRUG00000017551	kars	99	84.539	Takifugu_rubripes
ENSXMAG00000003191	kars	90	90.805	ENSTNIG00000009351	kars	97	87.257	Tetraodon_nigroviridis
ENSXMAG00000003191	kars	97	62.014	ENSTBEG00000004610	KARS	98	62.014	Tupaia_belangeri
ENSXMAG00000003191	kars	97	79.469	ENSTTRG00000001221	KARS	90	79.823	Tursiops_truncatus
ENSXMAG00000003191	kars	98	79.268	ENSUAMG00000017557	KARS	96	79.268	Ursus_americanus
ENSXMAG00000003191	kars	99	77.740	ENSUMAG00000014559	KARS	93	77.740	Ursus_maritimus
ENSXMAG00000003191	kars	99	76.410	ENSVPAG00000003716	KARS	94	76.410	Vicugna_pacos
ENSXMAG00000003191	kars	99	79.652	ENSVVUG00000024338	KARS	98	79.856	Vulpes_vulpes
ENSXMAG00000003191	kars	100	79.110	ENSXETG00000003569	kars	99	78.938	Xenopus_tropicalis
ENSXMAG00000003191	kars	97	99.642	ENSXCOG00000011313	kars	100	99.642	Xiphophorus_couchianus