EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000003221 (Gene tree)
Gene ID
102224862
Gene Symbol
rpl13
Alias
zgc:92272
Full Name
ribosomal protein L13
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Minus strand
Length
5892 bases
Position
chr4:17474911-17480802
Accession
102224862
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000003229Ribosomal_L13ePF01294.182.7e-8411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000003234-3564XM_005810421ENSXMAP00000003229211 (aa)XP_005810478M3ZLY7
Gene Model
Click here to download ENSXMAG00000003221's gene model file
Pathways
Pathway IDPathway NameSource
xma03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003221's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000003221rpl1310087.678ENSG00000167526RPL1310088.889Homo_sapiens
ENSXMAG00000003221rpl1310097.156ENSAPOG00000010933rpl1310097.156Acanthochromis_polyacanthus
ENSXMAG00000003221rpl1310078.673ENSAMEG00000001111RPL1310078.673Ailuropoda_melanoleuca
ENSXMAG00000003221rpl1310096.682ENSACIG00000000422rpl1310096.682Amphilophus_citrinellus
ENSXMAG00000003221rpl1310097.156ENSAOCG00000014635rpl1310097.156Amphiprion_ocellaris
ENSXMAG00000003221rpl1310096.682ENSAPEG00000011271rpl1310096.682Amphiprion_percula
ENSXMAG00000003221rpl1310097.630ENSATEG00000004902rpl1310097.630Anabas_testudineus
ENSXMAG00000003221rpl1310089.100ENSACAG00000017072RPL1310089.100Anolis_carolinensis
ENSXMAG00000003221rpl1310088.152ENSANAG00000030539RPL1310088.152Aotus_nancymaae
ENSXMAG00000003221rpl1310096.209ENSACLG00000001642rpl1310096.209Astatotilapia_calliptera
ENSXMAG00000003221rpl1310090.995ENSAMXG00000006495rpl1310090.995Astyanax_mexicanus
ENSXMAG00000003221rpl1310080.095ENSBTAG00000033143-10080.095Bos_taurus
ENSXMAG00000003221rpl1310088.626ENSBTAG00000012044RPL137288.626Bos_taurus
ENSXMAG00000003221rpl139859.223WBGene00004425rpl-139959.223Caenorhabditis_elegans
ENSXMAG00000003221rpl1310088.152ENSCJAG00000009672-10088.152Callithrix_jacchus
ENSXMAG00000003221rpl139987.619ENSCJAG00000016268-9987.619Callithrix_jacchus
ENSXMAG00000003221rpl1310088.626ENSCAFG00000019840RPL1310088.626Canis_familiaris
ENSXMAG00000003221rpl138755.191ENSCAFG00000002388-10054.098Canis_familiaris
ENSXMAG00000003221rpl139565.174ENSCAFG00020024795-7575.000Canis_lupus_dingo
ENSXMAG00000003221rpl1310088.626ENSCAFG00020005125RPL1310088.626Canis_lupus_dingo
ENSXMAG00000003221rpl1310088.626ENSCHIG00000001441-10088.626Capra_hircus
ENSXMAG00000003221rpl1310072.512ENSCHIG00000026795-9272.512Capra_hircus
ENSXMAG00000003221rpl139582.587ENSCHIG00000017227-8782.587Capra_hircus
ENSXMAG00000003221rpl1310087.678ENSTSYG00000027423RPL1310087.678Carlito_syrichta
ENSXMAG00000003221rpl1310088.626ENSCPOG00000027348RPL1310088.626Cavia_porcellus
ENSXMAG00000003221rpl1310088.152ENSCCAG00000024248RPL1310088.152Cebus_capucinus
ENSXMAG00000003221rpl139965.238ENSCATG00000038806-9665.238Cercocebus_atys
ENSXMAG00000003221rpl1310088.626ENSCATG00000042426RPL1310088.626Cercocebus_atys
ENSXMAG00000003221rpl1310088.626ENSCLAG00000003801RPL1310088.626Chinchilla_lanigera
ENSXMAG00000003221rpl1310087.678ENSCSAG00000000476-10087.678Chlorocebus_sabaeus
ENSXMAG00000003221rpl1310089.573ENSCPBG00000013618RPL1310089.573Chrysemys_picta_bellii
ENSXMAG00000003221rpl139767.647ENSCING00000002582-9267.647Ciona_intestinalis
ENSXMAG00000003221rpl139763.235ENSCSAVG00000007075-9866.667Ciona_savignyi
ENSXMAG00000003221rpl136789.437ENSCANG00000028258RPL137789.437Colobus_angolensis_palliatus
ENSXMAG00000003221rpl1310072.512ENSCGRG00001023328-10072.512Cricetulus_griseus_chok1gshd
ENSXMAG00000003221rpl1310088.152ENSCGRG00001022563Rpl1310088.152Cricetulus_griseus_chok1gshd
ENSXMAG00000003221rpl139367.513ENSCGRG00001008381-10067.513Cricetulus_griseus_chok1gshd
ENSXMAG00000003221rpl138569.444ENSCGRG00000016503-10069.444Cricetulus_griseus_crigri
ENSXMAG00000003221rpl1310087.678ENSCGRG00000014556Rpl1310087.678Cricetulus_griseus_crigri
ENSXMAG00000003221rpl1310096.682ENSCSEG00000008346rpl1310096.682Cynoglossus_semilaevis
ENSXMAG00000003221rpl1310098.578ENSCVAG00000019742rpl1310098.578Cyprinodon_variegatus
ENSXMAG00000003221rpl1310092.417ENSDARG00000099380rpl1310092.417Danio_rerio
ENSXMAG00000003221rpl1310088.152ENSDNOG00000034247RPL1310088.152Dasypus_novemcinctus
ENSXMAG00000003221rpl138187.059ENSDORG00000028330Rpl1310087.059Dipodomys_ordii
ENSXMAG00000003221rpl139564.878FBgn0011272RpL139364.878Drosophila_melanogaster
ENSXMAG00000003221rpl138959.043ENSETEG00000004518-9959.043Echinops_telfairi
ENSXMAG00000003221rpl139874.286ENSETEG00000015057-9874.286Echinops_telfairi
ENSXMAG00000003221rpl1310069.194ENSEBUG00000000730rpl139969.194Eptatretus_burgeri
ENSXMAG00000003221rpl139956.667ENSEEUG00000006113-9956.190Erinaceus_europaeus
ENSXMAG00000003221rpl136685.000ENSEEUG00000011190-10085.000Erinaceus_europaeus
ENSXMAG00000003221rpl1310091.469ENSELUG00000014509rpl1310091.469Esox_lucius
ENSXMAG00000003221rpl1310086.730ENSFCAG00000003338RPL1310086.730Felis_catus
ENSXMAG00000003221rpl138759.677ENSFCAG00000029961-9356.150Felis_catus
ENSXMAG00000003221rpl1310089.100ENSFALG00000003173RPL1310089.100Ficedula_albicollis
ENSXMAG00000003221rpl1310088.626ENSFDAG00000011310RPL1310088.626Fukomys_damarensis
ENSXMAG00000003221rpl1310099.052ENSFHEG00000006122rpl1310099.052Fundulus_heteroclitus
ENSXMAG00000003221rpl1310087.678ENSGMOG00000002752rpl1310086.256Gadus_morhua
ENSXMAG00000003221rpl1310089.100ENSGALG00000006179RPL1310089.100Gallus_gallus
ENSXMAG00000003221rpl1310089.573ENSGAFG00000017260rpl1310089.573Gambusia_affinis
ENSXMAG00000003221rpl1310092.417ENSGACG00000015752rpl1310092.417Gasterosteus_aculeatus
ENSXMAG00000003221rpl1310090.047ENSGAGG00000003371RPL1310090.047Gopherus_agassizii
ENSXMAG00000003221rpl1310070.142ENSGGOG00000026762-10070.142Gorilla_gorilla
ENSXMAG00000003221rpl138388.636ENSGGOG00000025427RPL139888.372Gorilla_gorilla
ENSXMAG00000003221rpl1310095.735ENSHBUG00000013579rpl1310095.735Haplochromis_burtoni
ENSXMAG00000003221rpl1310088.152ENSHGLG00000010880RPL1310088.152Heterocephalus_glaber_female
ENSXMAG00000003221rpl1310088.152ENSHGLG00100018449RPL1310088.152Heterocephalus_glaber_male
ENSXMAG00000003221rpl1310094.787ENSHCOG00000002997rpl1310094.787Hippocampus_comes
ENSXMAG00000003221rpl1310089.100ENSIPUG00000009775rpl1310089.100Ictalurus_punctatus
ENSXMAG00000003221rpl1310086.730ENSSTOG00000011963RPL1310085.308Ictidomys_tridecemlineatus
ENSXMAG00000003221rpl1310074.408ENSJJAG00000000236-10074.408Jaculus_jaculus
ENSXMAG00000003221rpl1310088.152ENSJJAG00000014012Rpl1310088.152Jaculus_jaculus
ENSXMAG00000003221rpl1310096.209ENSKMAG00000006540rpl1310096.209Kryptolebias_marmoratus
ENSXMAG00000003221rpl1310095.261ENSLBEG00000026455rpl1310095.261Labrus_bergylta
ENSXMAG00000003221rpl135683.193ENSLACG00000005311-10083.193Latimeria_chalumnae
ENSXMAG00000003221rpl139165.803ENSLACG00000000752-9070.115Latimeria_chalumnae
ENSXMAG00000003221rpl138468.539ENSLACG00000004644-9768.786Latimeria_chalumnae
ENSXMAG00000003221rpl139168.020ENSLACG00000002299-9468.020Latimeria_chalumnae
ENSXMAG00000003221rpl136070.635ENSLACG00000001306-9170.248Latimeria_chalumnae
ENSXMAG00000003221rpl136183.594ENSLACG00000014843-9583.594Latimeria_chalumnae
ENSXMAG00000003221rpl1310089.573ENSLACG00000013768rpl1310089.573Latimeria_chalumnae
ENSXMAG00000003221rpl1310093.839ENSLOCG00000004063rpl1310093.839Lepisosteus_oculatus
ENSXMAG00000003221rpl1310087.204ENSLAFG00000004054RPL1310087.204Loxodonta_africana
ENSXMAG00000003221rpl1310088.152ENSMFAG00000027717-10088.152Macaca_fascicularis
ENSXMAG00000003221rpl1310064.455ENSMFAG00000046109-9764.455Macaca_fascicularis
ENSXMAG00000003221rpl139963.333ENSMMUG00000038060-9663.333Macaca_mulatta
ENSXMAG00000003221rpl1310088.152ENSMMUG00000017928RPL1310088.152Macaca_mulatta
ENSXMAG00000003221rpl139362.189ENSMNEG00000033097-8667.836Macaca_nemestrina
ENSXMAG00000003221rpl139964.762ENSMNEG00000030483-9664.762Macaca_nemestrina
ENSXMAG00000003221rpl139966.667ENSMLEG00000033776-9666.667Mandrillus_leucophaeus
ENSXMAG00000003221rpl1310068.246ENSMLEG00000036728-10068.246Mandrillus_leucophaeus
ENSXMAG00000003221rpl1310097.630ENSMAMG00000021552rpl1310097.630Mastacembelus_armatus
ENSXMAG00000003221rpl1310096.209ENSMZEG00005014343rpl1310096.209Maylandia_zebra
ENSXMAG00000003221rpl138489.831ENSMGAG00000008027RPL139789.535Meleagris_gallopavo
ENSXMAG00000003221rpl137586.792ENSMAUG00000020543-10086.792Mesocricetus_auratus
ENSXMAG00000003221rpl1310083.412ENSMAUG00000016802-10083.412Mesocricetus_auratus
ENSXMAG00000003221rpl137283.007ENSMICG00000027620-8883.007Microcebus_murinus
ENSXMAG00000003221rpl1310087.678ENSMICG00000043954-10087.678Microcebus_murinus
ENSXMAG00000003221rpl1310087.204ENSMOCG00000002216-10087.204Microtus_ochrogaster
ENSXMAG00000003221rpl1310079.147ENSMOCG00000021875-10077.251Microtus_ochrogaster
ENSXMAG00000003221rpl1310072.512ENSMOCG00000011602-10072.512Microtus_ochrogaster
ENSXMAG00000003221rpl1310077.725ENSMOCG00000016985-10077.251Microtus_ochrogaster
ENSXMAG00000003221rpl1310088.626ENSMOCG00000009058-10088.626Microtus_ochrogaster
ENSXMAG00000003221rpl1310096.209ENSMMOG00000016577rpl1310096.209Mola_mola
ENSXMAG00000003221rpl1310089.100ENSMODG00000003663RPL1310089.100Monodelphis_domestica
ENSXMAG00000003221rpl1310095.735ENSMALG00000020934rpl1310095.735Monopterus_albus
ENSXMAG00000003221rpl1310088.626MGP_CAROLIEiJ_G0031676Rpl1310088.626Mus_caroli
ENSXMAG00000003221rpl1310088.626ENSMUSG00000000740Rpl1310088.626Mus_musculus
ENSXMAG00000003221rpl1310088.626MGP_PahariEiJ_G0023274Rpl1310088.626Mus_pahari
ENSXMAG00000003221rpl1310088.626MGP_SPRETEiJ_G0032794Rpl1310088.626Mus_spretus
ENSXMAG00000003221rpl139483.920MGP_SPRETEiJ_G0031839-7883.920Mus_spretus
ENSXMAG00000003221rpl139950.718ENSMPUG00000001481-9649.761Mustela_putorius_furo
ENSXMAG00000003221rpl1310088.626ENSMLUG00000010950RPL139488.626Myotis_lucifugus
ENSXMAG00000003221rpl138767.760ENSNGAG00000014655-9567.760Nannospalax_galili
ENSXMAG00000003221rpl138461.236ENSNGAG00000012072-9561.047Nannospalax_galili
ENSXMAG00000003221rpl1310088.152ENSNGAG00000018467Rpl1310088.152Nannospalax_galili
ENSXMAG00000003221rpl1310095.735ENSNBRG00000011031rpl1310095.735Neolamprologus_brichardi
ENSXMAG00000003221rpl1310088.152ENSNLEG00000015774RPL1310088.152Nomascus_leucogenys
ENSXMAG00000003221rpl1310069.340ENSNLEG00000028759-10069.811Nomascus_leucogenys
ENSXMAG00000003221rpl1310087.678ENSODEG00000019458-10087.678Octodon_degus
ENSXMAG00000003221rpl1310086.256ENSODEG00000019297-10086.256Octodon_degus
ENSXMAG00000003221rpl1310084.834ENSODEG00000019915-10084.834Octodon_degus
ENSXMAG00000003221rpl1310085.782ENSODEG00000020384-10085.782Octodon_degus
ENSXMAG00000003221rpl1310083.412ENSODEG00000019351-10083.412Octodon_degus
ENSXMAG00000003221rpl1310087.678ENSODEG00000004235-10087.678Octodon_degus
ENSXMAG00000003221rpl1310095.735ENSONIG00000005934rpl1310095.735Oreochromis_niloticus
ENSXMAG00000003221rpl1310088.152ENSOANG00000006729RPL1310088.152Ornithorhynchus_anatinus
ENSXMAG00000003221rpl1310081.043ENSOCUG00000007536-10080.569Oryctolagus_cuniculus
ENSXMAG00000003221rpl1310083.886ENSOCUG00000024415-10084.360Oryctolagus_cuniculus
ENSXMAG00000003221rpl1310082.938ENSOCUG00000022399-10083.412Oryctolagus_cuniculus
ENSXMAG00000003221rpl1310097.156ENSORLG00000007654rpl1310097.156Oryzias_latipes
ENSXMAG00000003221rpl1310097.156ENSORLG00020009960rpl1310097.156Oryzias_latipes_hni
ENSXMAG00000003221rpl1310097.156ENSORLG00015008108rpl1310097.156Oryzias_latipes_hsok
ENSXMAG00000003221rpl1310097.630ENSOMEG00000001728rpl1310097.630Oryzias_melastigma
ENSXMAG00000003221rpl1310088.626ENSOGAG00000026444RPL1310088.626Otolemur_garnettii
ENSXMAG00000003221rpl1310081.043ENSOARG00000003957-7181.043Ovis_aries
ENSXMAG00000003221rpl138388.571ENSPPAG00000029415-9888.304Pan_paniscus
ENSXMAG00000003221rpl139982.857ENSPPAG00000042590-9682.857Pan_paniscus
ENSXMAG00000003221rpl1310069.194ENSPPAG00000041631-10069.194Pan_paniscus
ENSXMAG00000003221rpl1310086.730ENSPPRG00000003949RPL1310086.730Panthera_pardus
ENSXMAG00000003221rpl138459.890ENSPPRG00000006057-8656.667Panthera_pardus
ENSXMAG00000003221rpl138459.890ENSPTIG00000014719-8656.667Panthera_tigris_altaica
ENSXMAG00000003221rpl136285.385ENSPTIG00000010985RPL138685.385Panthera_tigris_altaica
ENSXMAG00000003221rpl1310068.720ENSPTRG00000047911-10068.720Pan_troglodytes
ENSXMAG00000003221rpl1310082.938ENSPTRG00000041770-10082.938Pan_troglodytes
ENSXMAG00000003221rpl1310088.152ENSPTRG00000008480RPL1310088.152Pan_troglodytes
ENSXMAG00000003221rpl1310088.626ENSPANG00000031667RPL1310088.626Papio_anubis
ENSXMAG00000003221rpl1310092.891ENSPKIG00000001789rpl1310092.891Paramormyrops_kingsleyae
ENSXMAG00000003221rpl1310090.521ENSPSIG00000015634RPL1310090.521Pelodiscus_sinensis
ENSXMAG00000003221rpl1310095.261ENSPMGG00000006067rpl1310095.261Periophthalmus_magnuspinnatus
ENSXMAG00000003221rpl1310088.626ENSPEMG00000010342Rpl1310088.626Peromyscus_maniculatus_bairdii
ENSXMAG00000003221rpl13100100.000ENSPFOG00000013435rpl13100100.000Poecilia_formosa
ENSXMAG00000003221rpl13100100.000ENSPLAG00000004085rpl13100100.000Poecilia_latipinna
ENSXMAG00000003221rpl13100100.000ENSPMEG00000015599rpl13100100.000Poecilia_mexicana
ENSXMAG00000003221rpl1310099.526ENSPREG00000023190rpl1310099.526Poecilia_reticulata
ENSXMAG00000003221rpl1310087.204ENSPCAG00000015461RPL1310087.204Procavia_capensis
ENSXMAG00000003221rpl1310088.626ENSPCOG00000024647RPL1310088.626Propithecus_coquereli
ENSXMAG00000003221rpl1310085.782ENSPVAG00000015130RPL1310085.782Pteropus_vampyrus
ENSXMAG00000003221rpl1310095.735ENSPNYG00000013189rpl1310095.735Pundamilia_nyererei
ENSXMAG00000003221rpl1310093.365ENSPNAG00000002916rpl1310093.365Pygocentrus_nattereri
ENSXMAG00000003221rpl1310088.152ENSRNOG00000015335Rpl1310088.152Rattus_norvegicus
ENSXMAG00000003221rpl139982.381ENSRNOG00000059545AC114446.110080.660Rattus_norvegicus
ENSXMAG00000003221rpl1310082.938ENSRNOG00000029227AABR07054469.110082.938Rattus_norvegicus
ENSXMAG00000003221rpl1310087.204ENSRNOG00000055911LOC10036125910087.204Rattus_norvegicus
ENSXMAG00000003221rpl1310086.730ENSRNOG00000061438LOC10036049110086.730Rattus_norvegicus
ENSXMAG00000003221rpl139966.667ENSRBIG00000010434-8966.667Rhinopithecus_bieti
ENSXMAG00000003221rpl1310088.626ENSRBIG00000031937RPL1310088.626Rhinopithecus_bieti
ENSXMAG00000003221rpl1310088.626ENSRROG00000036999-10088.626Rhinopithecus_roxellana
ENSXMAG00000003221rpl139966.667ENSRROG00000025626-8966.667Rhinopithecus_roxellana
ENSXMAG00000003221rpl139248.969YDL082WRPL13A10050.237Saccharomyces_cerevisiae
ENSXMAG00000003221rpl139249.485YMR142CRPL13B10050.711Saccharomyces_cerevisiae
ENSXMAG00000003221rpl1310068.720ENSSBOG00000019618-10068.720Saimiri_boliviensis_boliviensis
ENSXMAG00000003221rpl1310088.152ENSSBOG00000028589-10088.152Saimiri_boliviensis_boliviensis
ENSXMAG00000003221rpl138156.725ENSSHAG00000010433-9956.725Sarcophilus_harrisii
ENSXMAG00000003221rpl1310093.839ENSSFOG00015019594rpl1310093.839Scleropages_formosus
ENSXMAG00000003221rpl1310094.787ENSSMAG00000021443rpl1310094.787Scophthalmus_maximus
ENSXMAG00000003221rpl1310097.156ENSSDUG00000001262rpl1310097.156Seriola_dumerili
ENSXMAG00000003221rpl139653.110ENSSLDG00000007067-9453.110Seriola_lalandi_dorsalis
ENSXMAG00000003221rpl1310097.156ENSSLDG00000021182rpl1310097.156Seriola_lalandi_dorsalis
ENSXMAG00000003221rpl137688.125ENSSPUG00000006904RPL138988.125Sphenodon_punctatus
ENSXMAG00000003221rpl1310097.156ENSSPAG00000020434rpl1310097.156Stegastes_partitus
ENSXMAG00000003221rpl1310064.455ENSSSCG00000036198-10064.455Sus_scrofa
ENSXMAG00000003221rpl139952.558ENSSSCG00000029020-9652.558Sus_scrofa
ENSXMAG00000003221rpl139962.500ENSSSCG00000007813-9962.500Sus_scrofa
ENSXMAG00000003221rpl139965.238ENSSSCG00000003723-9965.238Sus_scrofa
ENSXMAG00000003221rpl1310087.678ENSSSCG00000024974RPL1310087.678Sus_scrofa
ENSXMAG00000003221rpl139958.373ENSSSCG00000033294-9958.454Sus_scrofa
ENSXMAG00000003221rpl1310087.204ENSTGUG00000007874RPL1310087.204Taeniopygia_guttata
ENSXMAG00000003221rpl1310094.787ENSTRUG00000021170rpl1310094.787Takifugu_rubripes
ENSXMAG00000003221rpl1310095.735ENSTNIG00000009349rpl1310095.735Tetraodon_nigroviridis
ENSXMAG00000003221rpl1310088.626ENSTTRG00000004374RPL1310088.626Tursiops_truncatus
ENSXMAG00000003221rpl1310088.152ENSUAMG00000020363RPL1310088.152Ursus_americanus
ENSXMAG00000003221rpl136080.952ENSVPAG00000000569-10080.952Vicugna_pacos
ENSXMAG00000003221rpl1310081.517ENSVVUG00000003839-10081.517Vulpes_vulpes
ENSXMAG00000003221rpl139453.202ENSVVUG00000005779-9250.000Vulpes_vulpes
ENSXMAG00000003221rpl1310085.308ENSXETG00000019835rpl1310085.308Xenopus_tropicalis
ENSXMAG00000003221rpl1310099.526ENSXCOG00000011315rpl1310099.526Xiphophorus_couchianus

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