EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003244 (Gene tree)
Gene ID: 102217071
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6450 bases
Position: chr7:23265683-23272132
Accession: 102217071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000035200	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSXMAP00000003261	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000031250	-	624	-	ENSXMAP00000035200	207 (aa)	-	-
ENSXMAT00000003266	-	3637	XM_005816727	ENSXMAP00000003261	233 (aa)	XP_005816784	M3ZM19

Gene Model

Click here to download ENSXMAG00000003244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003244's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003244	rabl3	100	83.051	ENSG00000144840	RABL3	100	89.147	Homo_sapiens
ENSXMAG00000003244	rabl3	100	94.444	ENSAPOG00000024479	rabl3	100	94.444	Acanthochromis_polyacanthus
ENSXMAG00000003244	rabl3	100	83.898	ENSAMEG00000004809	RABL3	100	83.898	Ailuropoda_melanoleuca
ENSXMAG00000003244	rabl3	100	90.558	ENSACIG00000014343	rabl3	100	90.558	Amphilophus_citrinellus
ENSXMAG00000003244	rabl3	100	94.444	ENSAOCG00000011851	rabl3	100	94.444	Amphiprion_ocellaris
ENSXMAG00000003244	rabl3	100	94.444	ENSAPEG00000011214	rabl3	100	94.444	Amphiprion_percula
ENSXMAG00000003244	rabl3	100	93.991	ENSATEG00000003503	rabl3	100	93.991	Anabas_testudineus
ENSXMAG00000003244	rabl3	100	78.390	ENSACAG00000011313	-	100	78.390	Anolis_carolinensis
ENSXMAG00000003244	rabl3	100	85.169	ENSANAG00000027278	RABL3	100	85.169	Aotus_nancymaae
ENSXMAG00000003244	rabl3	100	94.850	ENSACLG00000009820	rabl3	100	94.850	Astatotilapia_calliptera
ENSXMAG00000003244	rabl3	100	92.704	ENSAMXG00000038716	rabl3	100	92.704	Astyanax_mexicanus
ENSXMAG00000003244	rabl3	100	85.593	ENSBTAG00000015898	RABL3	100	85.593	Bos_taurus
ENSXMAG00000003244	rabl3	100	85.169	ENSCJAG00000008611	RABL3	100	85.169	Callithrix_jacchus
ENSXMAG00000003244	rabl3	100	84.746	ENSCAFG00000011292	RABL3	89	84.746	Canis_familiaris
ENSXMAG00000003244	rabl3	100	84.746	ENSCAFG00020006397	RABL3	100	84.746	Canis_lupus_dingo
ENSXMAG00000003244	rabl3	100	85.593	ENSCHIG00000017365	RABL3	100	85.593	Capra_hircus
ENSXMAG00000003244	rabl3	100	83.475	ENSCPOG00000009645	RABL3	100	83.475	Cavia_porcellus
ENSXMAG00000003244	rabl3	100	83.475	ENSCATG00000032561	RABL3	100	83.475	Cercocebus_atys
ENSXMAG00000003244	rabl3	100	83.051	ENSCLAG00000010855	RABL3	100	83.051	Chinchilla_lanigera
ENSXMAG00000003244	rabl3	99	83.262	ENSCSAG00000007155	RABL3	100	83.262	Chlorocebus_sabaeus
ENSXMAG00000003244	rabl3	100	83.898	ENSCPBG00000001999	RABL3	100	83.898	Chrysemys_picta_bellii
ENSXMAG00000003244	rabl3	100	83.475	ENSCANG00000031684	RABL3	100	83.475	Colobus_angolensis_palliatus
ENSXMAG00000003244	rabl3	100	81.356	ENSCGRG00001021537	Rabl3	100	81.356	Cricetulus_griseus_chok1gshd
ENSXMAG00000003244	rabl3	100	81.356	ENSCGRG00000002114	Rabl3	100	81.356	Cricetulus_griseus_crigri
ENSXMAG00000003244	rabl3	100	87.143	ENSCSEG00000014982	rabl3	100	87.143	Cynoglossus_semilaevis
ENSXMAG00000003244	rabl3	100	89.855	ENSCVAG00000009904	rabl3	100	89.855	Cyprinodon_variegatus
ENSXMAG00000003244	rabl3	100	90.987	ENSDARG00000040959	rabl3	100	90.987	Danio_rerio
ENSXMAG00000003244	rabl3	100	84.322	ENSDNOG00000008174	RABL3	100	84.322	Dasypus_novemcinctus
ENSXMAG00000003244	rabl3	100	83.051	ENSETEG00000010206	RABL3	100	83.051	Echinops_telfairi
ENSXMAG00000003244	rabl3	100	85.169	ENSECAG00000023059	RABL3	100	85.169	Equus_caballus
ENSXMAG00000003244	rabl3	100	79.661	ENSEEUG00000002897	RABL3	100	79.661	Erinaceus_europaeus
ENSXMAG00000003244	rabl3	100	90.129	ENSELUG00000014758	rabl3	100	90.129	Esox_lucius
ENSXMAG00000003244	rabl3	100	84.746	ENSFCAG00000031879	RABL3	100	80.660	Felis_catus
ENSXMAG00000003244	rabl3	100	82.203	ENSFALG00000005296	RABL3	100	82.203	Ficedula_albicollis
ENSXMAG00000003244	rabl3	100	84.681	ENSFDAG00000000307	RABL3	100	84.681	Fukomys_damarensis
ENSXMAG00000003244	rabl3	100	95.279	ENSFHEG00000011273	rabl3	100	95.279	Fundulus_heteroclitus
ENSXMAG00000003244	rabl3	100	90.558	ENSGMOG00000007845	rabl3	100	90.558	Gadus_morhua
ENSXMAG00000003244	rabl3	100	83.051	ENSGALG00000014949	RABL3	100	83.051	Gallus_gallus
ENSXMAG00000003244	rabl3	100	96.567	ENSGAFG00000015953	rabl3	100	96.567	Gambusia_affinis
ENSXMAG00000003244	rabl3	100	90.558	ENSGACG00000007387	rabl3	100	91.473	Gasterosteus_aculeatus
ENSXMAG00000003244	rabl3	100	84.322	ENSGAGG00000003677	RABL3	100	84.322	Gopherus_agassizii
ENSXMAG00000003244	rabl3	100	83.051	ENSGGOG00000006059	RABL3	100	83.051	Gorilla_gorilla
ENSXMAG00000003244	rabl3	100	95.279	ENSHBUG00000019478	rabl3	93	95.279	Haplochromis_burtoni
ENSXMAG00000003244	rabl3	100	85.106	ENSHGLG00000014491	RABL3	100	85.106	Heterocephalus_glaber_female
ENSXMAG00000003244	rabl3	100	85.106	ENSHGLG00100004866	RABL3	100	85.106	Heterocephalus_glaber_male
ENSXMAG00000003244	rabl3	100	89.855	ENSHCOG00000019245	rabl3	100	89.855	Hippocampus_comes
ENSXMAG00000003244	rabl3	100	90.987	ENSIPUG00000012657	rabl3	100	90.987	Ictalurus_punctatus
ENSXMAG00000003244	rabl3	100	83.051	ENSSTOG00000019452	RABL3	100	83.051	Ictidomys_tridecemlineatus
ENSXMAG00000003244	rabl3	100	79.245	ENSJJAG00000023553	Rabl3	100	79.245	Jaculus_jaculus
ENSXMAG00000003244	rabl3	100	88.841	ENSKMAG00000015464	rabl3	100	88.841	Kryptolebias_marmoratus
ENSXMAG00000003244	rabl3	100	93.162	ENSLBEG00000020595	rabl3	100	93.162	Labrus_bergylta
ENSXMAG00000003244	rabl3	100	93.162	ENSLBEG00000010627	-	100	93.162	Labrus_bergylta
ENSXMAG00000003244	rabl3	100	86.017	ENSLOCG00000006265	rabl3	100	86.017	Lepisosteus_oculatus
ENSXMAG00000003244	rabl3	100	84.746	ENSLAFG00000003711	RABL3	100	84.746	Loxodonta_africana
ENSXMAG00000003244	rabl3	100	83.475	ENSMFAG00000031923	RABL3	100	83.475	Macaca_fascicularis
ENSXMAG00000003244	rabl3	100	79.245	ENSMMUG00000001594	RABL3	100	79.245	Macaca_mulatta
ENSXMAG00000003244	rabl3	100	83.475	ENSMNEG00000043980	RABL3	100	83.475	Macaca_nemestrina
ENSXMAG00000003244	rabl3	100	83.475	ENSMLEG00000028177	RABL3	100	83.475	Mandrillus_leucophaeus
ENSXMAG00000003244	rabl3	100	93.991	ENSMAMG00000015155	rabl3	100	93.991	Mastacembelus_armatus
ENSXMAG00000003244	rabl3	100	94.850	ENSMZEG00005002607	rabl3	100	94.850	Maylandia_zebra
ENSXMAG00000003244	rabl3	100	81.356	ENSMAUG00000013022	Rabl3	100	81.356	Mesocricetus_auratus
ENSXMAG00000003244	rabl3	100	84.322	ENSMICG00000049288	RABL3	100	84.322	Microcebus_murinus
ENSXMAG00000003244	rabl3	100	82.203	ENSMOCG00000015237	Rabl3	100	82.203	Microtus_ochrogaster
ENSXMAG00000003244	rabl3	100	89.270	ENSMMOG00000005628	rabl3	100	89.270	Mola_mola
ENSXMAG00000003244	rabl3	100	84.322	ENSMODG00000018232	RABL3	100	84.322	Monodelphis_domestica
ENSXMAG00000003244	rabl3	100	87.712	ENSMALG00000018837	rabl3	100	87.712	Monopterus_albus
ENSXMAG00000003244	rabl3	100	81.356	MGP_CAROLIEiJ_G0020728	Rabl3	100	88.372	Mus_caroli
ENSXMAG00000003244	rabl3	100	81.356	ENSMUSG00000022827	Rabl3	100	88.372	Mus_musculus
ENSXMAG00000003244	rabl3	100	80.932	MGP_PahariEiJ_G0016429	Rabl3	100	88.372	Mus_pahari
ENSXMAG00000003244	rabl3	100	81.356	MGP_SPRETEiJ_G0021628	Rabl3	100	88.372	Mus_spretus
ENSXMAG00000003244	rabl3	100	84.746	ENSMPUG00000008257	RABL3	89	84.746	Mustela_putorius_furo
ENSXMAG00000003244	rabl3	100	84.746	ENSMLUG00000014113	RABL3	100	84.746	Myotis_lucifugus
ENSXMAG00000003244	rabl3	99	79.612	ENSNGAG00000001939	Rabl3	99	79.612	Nannospalax_galili
ENSXMAG00000003244	rabl3	93	94.931	ENSNBRG00000012423	rabl3	92	94.931	Neolamprologus_brichardi
ENSXMAG00000003244	rabl3	100	83.051	ENSNLEG00000031723	RABL3	100	83.051	Nomascus_leucogenys
ENSXMAG00000003244	rabl3	100	83.475	ENSMEUG00000006606	RABL3	100	83.475	Notamacropus_eugenii
ENSXMAG00000003244	rabl3	100	83.475	ENSODEG00000004758	-	100	83.475	Octodon_degus
ENSXMAG00000003244	rabl3	100	95.708	ENSONIG00000004281	rabl3	100	95.708	Oreochromis_niloticus
ENSXMAG00000003244	rabl3	99	82.479	ENSOANG00000003928	RABL3	99	82.479	Ornithorhynchus_anatinus
ENSXMAG00000003244	rabl3	100	91.845	ENSORLG00000020457	rabl3	100	91.845	Oryzias_latipes
ENSXMAG00000003244	rabl3	100	91.845	ENSORLG00020008991	rabl3	100	87.554	Oryzias_latipes_hni
ENSXMAG00000003244	rabl3	100	91.845	ENSORLG00015005649	rabl3	88	91.845	Oryzias_latipes_hsok
ENSXMAG00000003244	rabl3	100	93.133	ENSOMEG00000015066	rabl3	100	93.133	Oryzias_melastigma
ENSXMAG00000003244	rabl3	100	83.898	ENSOGAG00000005961	RABL3	100	83.898	Otolemur_garnettii
ENSXMAG00000003244	rabl3	100	85.593	ENSOARG00000019939	RABL3	100	85.593	Ovis_aries
ENSXMAG00000003244	rabl3	94	81.532	ENSPPAG00000036997	RABL3	87	81.532	Pan_paniscus
ENSXMAG00000003244	rabl3	100	84.746	ENSPPRG00000016325	RABL3	100	84.746	Panthera_pardus
ENSXMAG00000003244	rabl3	100	84.746	ENSPTIG00000018021	RABL3	100	84.746	Panthera_tigris_altaica
ENSXMAG00000003244	rabl3	100	83.051	ENSPTRG00000015272	RABL3	100	83.051	Pan_troglodytes
ENSXMAG00000003244	rabl3	100	83.475	ENSPANG00000001339	RABL3	100	83.475	Papio_anubis
ENSXMAG00000003244	rabl3	100	90.129	ENSPKIG00000007818	rabl3	100	90.129	Paramormyrops_kingsleyae
ENSXMAG00000003244	rabl3	100	83.475	ENSPSIG00000011358	RABL3	100	83.475	Pelodiscus_sinensis
ENSXMAG00000003244	rabl3	100	87.554	ENSPMGG00000015794	rabl3	100	87.554	Periophthalmus_magnuspinnatus
ENSXMAG00000003244	rabl3	100	81.356	ENSPEMG00000016913	Rabl3	100	81.356	Peromyscus_maniculatus_bairdii
ENSXMAG00000003244	rabl3	100	83.475	ENSPCIG00000018922	RABL3	100	83.475	Phascolarctos_cinereus
ENSXMAG00000003244	rabl3	100	98.712	ENSPFOG00000008586	rabl3	100	98.712	Poecilia_formosa
ENSXMAG00000003244	rabl3	100	98.712	ENSPLAG00000014482	rabl3	100	98.712	Poecilia_latipinna
ENSXMAG00000003244	rabl3	100	98.712	ENSPMEG00000002295	rabl3	100	98.712	Poecilia_mexicana
ENSXMAG00000003244	rabl3	100	98.283	ENSPREG00000014815	rabl3	100	98.283	Poecilia_reticulata
ENSXMAG00000003244	rabl3	100	83.475	ENSPPYG00000013501	RABL3	100	83.475	Pongo_abelii
ENSXMAG00000003244	rabl3	100	84.746	ENSPCOG00000022230	RABL3	100	84.746	Propithecus_coquereli
ENSXMAG00000003244	rabl3	100	83.898	ENSPVAG00000010013	RABL3	100	83.898	Pteropus_vampyrus
ENSXMAG00000003244	rabl3	100	95.279	ENSPNYG00000006659	rabl3	100	95.279	Pundamilia_nyererei
ENSXMAG00000003244	rabl3	100	93.991	ENSPNAG00000000748	rabl3	100	93.991	Pygocentrus_nattereri
ENSXMAG00000003244	rabl3	100	80.932	ENSRNOG00000026085	Rabl3	100	80.932	Rattus_norvegicus
ENSXMAG00000003244	rabl3	100	83.475	ENSRBIG00000040941	RABL3	100	83.475	Rhinopithecus_bieti
ENSXMAG00000003244	rabl3	100	83.475	ENSRROG00000043745	RABL3	100	83.475	Rhinopithecus_roxellana
ENSXMAG00000003244	rabl3	100	85.169	ENSSBOG00000004022	RABL3	100	85.169	Saimiri_boliviensis_boliviensis
ENSXMAG00000003244	rabl3	100	82.627	ENSSHAG00000012233	RABL3	100	82.627	Sarcophilus_harrisii
ENSXMAG00000003244	rabl3	100	90.987	ENSSFOG00015010171	rabl3	100	90.987	Scleropages_formosus
ENSXMAG00000003244	rabl3	100	92.735	ENSSMAG00000002403	rabl3	100	92.735	Scophthalmus_maximus
ENSXMAG00000003244	rabl3	100	94.421	ENSSDUG00000012078	rabl3	100	94.421	Seriola_dumerili
ENSXMAG00000003244	rabl3	100	94.850	ENSSLDG00000021899	rabl3	100	94.850	Seriola_lalandi_dorsalis
ENSXMAG00000003244	rabl3	100	84.322	ENSSARG00000008316	RABL3	100	84.322	Sorex_araneus
ENSXMAG00000003244	rabl3	100	83.475	ENSSPUG00000017490	RABL3	100	83.475	Sphenodon_punctatus
ENSXMAG00000003244	rabl3	100	94.850	ENSSPAG00000011642	rabl3	100	94.850	Stegastes_partitus
ENSXMAG00000003244	rabl3	100	85.169	ENSSSCG00000035258	RABL3	100	85.169	Sus_scrofa
ENSXMAG00000003244	rabl3	100	82.627	ENSTGUG00000013374	RABL3	100	82.627	Taeniopygia_guttata
ENSXMAG00000003244	rabl3	86	94.382	ENSTRUG00000007846	RABL3	100	94.531	Takifugu_rubripes
ENSXMAG00000003244	rabl3	100	72.034	ENSTBEG00000005153	RABL3	100	72.034	Tupaia_belangeri
ENSXMAG00000003244	rabl3	100	83.898	ENSUAMG00000005299	RABL3	100	83.898	Ursus_americanus
ENSXMAG00000003244	rabl3	100	83.475	ENSUMAG00000025256	RABL3	89	83.475	Ursus_maritimus
ENSXMAG00000003244	rabl3	100	85.169	ENSVPAG00000003776	RABL3	100	85.169	Vicugna_pacos
ENSXMAG00000003244	rabl3	100	84.746	ENSVVUG00000022300	RABL3	89	84.746	Vulpes_vulpes