EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003256 (Gene tree)
Gene ID: 102228422
Gene Symbol: -
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 14213 bases
Position: chr11:29202462-29216674
Accession: 102228422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003260	RRM_1	PF00076.22	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003265	-	5957	XM_023342520	ENSXMAP00000003260	1210 (aa)	XP_023198288	M3ZM18

Gene Model

Click here to download ENSXMAG00000003256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003256	-	61	81.216	ENSACLG00000002010	-	65	81.216	Astatotilapia_calliptera
ENSXMAG00000003256	-	66	86.125	ENSCVAG00000019389	-	62	87.237	Cyprinodon_variegatus
ENSXMAG00000003256	-	61	82.487	ENSKMAG00000004031	-	64	80.309	Kryptolebias_marmoratus
ENSXMAG00000003256	-	100	96.694	ENSPLAG00000017417	-	100	96.694	Poecilia_latipinna
ENSXMAG00000003256	-	99	97.157	ENSPMEG00000017911	-	100	97.157	Poecilia_mexicana
ENSXMAG00000003256	-	100	93.920	ENSPMEG00000007437	-	62	96.883	Poecilia_mexicana
ENSXMAG00000003256	-	100	94.084	ENSPREG00000012680	-	91	97.191	Poecilia_reticulata
ENSXMAG00000003256	-	61	81.216	ENSPNYG00000023102	-	65	81.216	Pundamilia_nyererei
ENSXMAG00000003256	-	69	81.830	ENSSPAG00000006625	-	64	81.806	Stegastes_partitus