EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003458 (Gene tree)
Gene ID: 102226507
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 12218 bases
Position: chr9:16348874-16361091
Accession: 102226507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003475	RRM_1	PF00076.22	3.5e-11	1	1
ENSXMAP00000003475	SAP	PF02037.27	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003480	-	5749	XM_005806382	ENSXMAP00000003475	753 (aa)	XP_005806439	M3ZMN2

Gene Model

Click here to download ENSXMAG00000003458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003458	safb	94	41.388	ENSG00000160633	SAFB	76	61.719	Homo_sapiens
ENSXMAG00000003458	safb	100	69.534	ENSAPOG00000022508	safb	100	69.341	Acanthochromis_polyacanthus
ENSXMAG00000003458	safb	53	51.071	ENSAMEG00000012254	SAFB	81	45.399	Ailuropoda_melanoleuca
ENSXMAG00000003458	safb	100	67.416	ENSACIG00000006247	safb	100	69.298	Amphilophus_citrinellus
ENSXMAG00000003458	safb	100	66.258	ENSAOCG00000006308	safb	100	68.045	Amphiprion_ocellaris
ENSXMAG00000003458	safb	100	69.570	ENSAPEG00000023342	safb	100	69.258	Amphiprion_percula
ENSXMAG00000003458	safb	100	68.133	ENSATEG00000004998	safb	100	67.658	Anabas_testudineus
ENSXMAG00000003458	safb	60	39.474	ENSAPLG00000005780	-	70	48.413	Anas_platyrhynchos
ENSXMAG00000003458	safb	61	56.132	ENSACAG00000016893	-	68	52.174	Anolis_carolinensis
ENSXMAG00000003458	safb	94	41.855	ENSANAG00000028821	SAFB	95	39.524	Aotus_nancymaae
ENSXMAG00000003458	safb	100	70.787	ENSACLG00000001926	safb	100	71.036	Astatotilapia_calliptera
ENSXMAG00000003458	safb	92	65.688	ENSAMXG00000018154	safb	99	55.309	Astyanax_mexicanus
ENSXMAG00000003458	safb	63	47.028	ENSBTAG00000007875	SAFB	96	38.137	Bos_taurus
ENSXMAG00000003458	safb	51	53.077	ENSCJAG00000017081	SAFB	95	44.403	Callithrix_jacchus
ENSXMAG00000003458	safb	53	51.254	ENSCAFG00000018803	SAFB	70	45.399	Canis_familiaris
ENSXMAG00000003458	safb	53	51.071	ENSCAFG00020018943	SAFB	81	45.399	Canis_lupus_dingo
ENSXMAG00000003458	safb	92	42.180	ENSCHIG00000007262	SAFB	96	38.376	Capra_hircus
ENSXMAG00000003458	safb	55	42.545	ENSTSYG00000001851	-	93	40.120	Carlito_syrichta
ENSXMAG00000003458	safb	50	51.779	ENSCPOG00000026322	SAFB	77	45.122	Cavia_porcellus
ENSXMAG00000003458	safb	94	41.855	ENSCCAG00000020193	SAFB	95	39.405	Cebus_capucinus
ENSXMAG00000003458	safb	94	41.577	ENSCATG00000029994	SAFB	95	39.502	Cercocebus_atys
ENSXMAG00000003458	safb	55	49.141	ENSCLAG00000007734	SAFB	77	45.937	Chinchilla_lanigera
ENSXMAG00000003458	safb	66	40.492	ENSCSAG00000009949	SAFB	95	39.203	Chlorocebus_sabaeus
ENSXMAG00000003458	safb	90	42.727	ENSCPBG00000010936	-	70	50.863	Chrysemys_picta_bellii
ENSXMAG00000003458	safb	90	42.080	ENSCPBG00000010928	-	97	42.118	Chrysemys_picta_bellii
ENSXMAG00000003458	safb	94	36.808	ENSCANG00000004774	-	61	59.701	Colobus_angolensis_palliatus
ENSXMAG00000003458	safb	94	40.550	ENSCANG00000019754	-	93	38.558	Colobus_angolensis_palliatus
ENSXMAG00000003458	safb	99	65.039	ENSCSEG00000019870	safb	100	63.402	Cynoglossus_semilaevis
ENSXMAG00000003458	safb	100	84.544	ENSCVAG00000002226	safb	100	84.544	Cyprinodon_variegatus
ENSXMAG00000003458	safb	97	56.118	ENSDARG00000020467	safb	99	55.517	Danio_rerio
ENSXMAG00000003458	safb	66	38.997	ENSDNOG00000015746	SAFB	69	44.785	Dasypus_novemcinctus
ENSXMAG00000003458	safb	50	54.331	ENSDORG00000016200	Safb	74	44.242	Dipodomys_ordii
ENSXMAG00000003458	safb	54	53.232	ENSEASG00005023019	SAFB	79	45.128	Equus_asinus_asinus
ENSXMAG00000003458	safb	54	53.232	ENSECAG00000018659	SAFB	71	43.225	Equus_caballus
ENSXMAG00000003458	safb	99	58.178	ENSELUG00000022327	safb	99	58.411	Esox_lucius
ENSXMAG00000003458	safb	53	51.071	ENSFCAG00000011835	SAFB	79	43.860	Felis_catus
ENSXMAG00000003458	safb	50	53.481	ENSFALG00000013881	-	69	50.558	Ficedula_albicollis
ENSXMAG00000003458	safb	64	42.667	ENSFALG00000013882	-	60	48.804	Ficedula_albicollis
ENSXMAG00000003458	safb	55	51.220	ENSFDAG00000020306	SAFB	50	51.220	Fukomys_damarensis
ENSXMAG00000003458	safb	100	88.058	ENSFHEG00000004219	safb	100	88.058	Fundulus_heteroclitus
ENSXMAG00000003458	safb	100	59.304	ENSGMOG00000014280	safb	100	60.287	Gadus_morhua
ENSXMAG00000003458	safb	57	51.084	ENSGALG00000001948	-	81	50.312	Gallus_gallus
ENSXMAG00000003458	safb	66	42.390	ENSGALG00000013365	-	97	42.919	Gallus_gallus
ENSXMAG00000003458	safb	100	93.214	ENSGAFG00000016162	safb	100	93.214	Gambusia_affinis
ENSXMAG00000003458	safb	100	63.562	ENSGACG00000011385	safb	100	64.193	Gasterosteus_aculeatus
ENSXMAG00000003458	safb	70	49.834	ENSGAGG00000017702	-	90	50.751	Gopherus_agassizii
ENSXMAG00000003458	safb	95	45.414	ENSGAGG00000008424	-	82	52.764	Gopherus_agassizii
ENSXMAG00000003458	safb	94	41.507	ENSGGOG00000015109	SAFB	95	39.383	Gorilla_gorilla
ENSXMAG00000003458	safb	100	67.085	ENSHBUG00000009218	safb	100	66.080	Haplochromis_burtoni
ENSXMAG00000003458	safb	55	47.766	ENSHGLG00000015883	SAFB	77	44.785	Heterocephalus_glaber_female
ENSXMAG00000003458	safb	84	45.399	ENSHGLG00100004228	SAFB	72	44.785	Heterocephalus_glaber_male
ENSXMAG00000003458	safb	93	61.749	ENSHCOG00000001705	safb	99	61.961	Hippocampus_comes
ENSXMAG00000003458	safb	99	57.109	ENSIPUG00000024869	safb2	100	57.447	Ictalurus_punctatus
ENSXMAG00000003458	safb	100	72.993	ENSKMAG00000022308	safb	100	73.479	Kryptolebias_marmoratus
ENSXMAG00000003458	safb	100	67.529	ENSLBEG00000006015	safb	100	67.412	Labrus_bergylta
ENSXMAG00000003458	safb	65	41.206	ENSLACG00000018090	SAFB	98	47.157	Latimeria_chalumnae
ENSXMAG00000003458	safb	98	54.545	ENSLOCG00000003613	safb	99	55.594	Lepisosteus_oculatus
ENSXMAG00000003458	safb	94	39.648	ENSLAFG00000003840	SAFB	96	38.738	Loxodonta_africana
ENSXMAG00000003458	safb	94	41.577	ENSMFAG00000003885	SAFB	95	39.502	Macaca_fascicularis
ENSXMAG00000003458	safb	94	41.619	ENSMMUG00000017970	SAFB	95	40.068	Macaca_mulatta
ENSXMAG00000003458	safb	66	40.036	ENSMNEG00000035637	SAFB	95	38.317	Macaca_nemestrina
ENSXMAG00000003458	safb	61	39.576	ENSMLEG00000038637	SAFB	95	37.305	Mandrillus_leucophaeus
ENSXMAG00000003458	safb	100	67.221	ENSMAMG00000003357	safb	91	66.033	Mastacembelus_armatus
ENSXMAG00000003458	safb	100	70.911	ENSMZEG00005009120	safb	100	71.161	Maylandia_zebra
ENSXMAG00000003458	safb	68	43.513	ENSMGAG00000001101	-	68	48.730	Meleagris_gallopavo
ENSXMAG00000003458	safb	57	51.393	ENSMGAG00000001051	-	82	52.052	Meleagris_gallopavo
ENSXMAG00000003458	safb	86	37.581	ENSMICG00000046795	-	70	57.971	Microcebus_murinus
ENSXMAG00000003458	safb	66	40.459	ENSMICG00000008739	-	97	39.774	Microcebus_murinus
ENSXMAG00000003458	safb	93	40.089	ENSMODG00000001236	SAFB	83	42.946	Monodelphis_domestica
ENSXMAG00000003458	safb	100	67.723	ENSMALG00000020330	safb	100	67.136	Monopterus_albus
ENSXMAG00000003458	safb	98	41.796	ENSMLUG00000001081	SAFB	95	38.976	Myotis_lucifugus
ENSXMAG00000003458	safb	93	41.596	ENSNLEG00000013551	SAFB	97	40.741	Nomascus_leucogenys
ENSXMAG00000003458	safb	100	68.052	ENSONIG00000002318	safb	100	68.052	Oreochromis_niloticus
ENSXMAG00000003458	safb	60	42.599	ENSOCUG00000014628	SAFB	67	38.581	Oryctolagus_cuniculus
ENSXMAG00000003458	safb	98	68.045	ENSORLG00000016989	safb	100	67.809	Oryzias_latipes
ENSXMAG00000003458	safb	98	64.645	ENSORLG00020000404	safb	100	64.232	Oryzias_latipes_hni
ENSXMAG00000003458	safb	98	68.045	ENSORLG00015010733	safb	100	67.975	Oryzias_latipes_hsok
ENSXMAG00000003458	safb	100	68.750	ENSOMEG00000009066	safb	100	68.627	Oryzias_melastigma
ENSXMAG00000003458	safb	64	39.966	ENSOGAG00000027769	SAFB	74	50.407	Otolemur_garnettii
ENSXMAG00000003458	safb	63	41.506	ENSOARG00000007662	-	77	43.931	Ovis_aries
ENSXMAG00000003458	safb	94	41.507	ENSPPAG00000035129	SAFB	95	39.265	Pan_paniscus
ENSXMAG00000003458	safb	53	51.071	ENSPPRG00000017197	SAFB	79	43.860	Panthera_pardus
ENSXMAG00000003458	safb	94	41.507	ENSPTRG00000010335	SAFB	95	39.265	Pan_troglodytes
ENSXMAG00000003458	safb	94	41.379	ENSPANG00000007770	SAFB	95	39.502	Papio_anubis
ENSXMAG00000003458	safb	99	55.886	ENSPKIG00000009902	safb	99	56.567	Paramormyrops_kingsleyae
ENSXMAG00000003458	safb	98	43.459	ENSPSIG00000009367	-	96	43.027	Pelodiscus_sinensis
ENSXMAG00000003458	safb	98	43.516	ENSPSIG00000011679	-	70	51.258	Pelodiscus_sinensis
ENSXMAG00000003458	safb	100	97.211	ENSPFOG00000007745	safb	100	97.211	Poecilia_formosa
ENSXMAG00000003458	safb	100	92.776	ENSPLAG00000001614	safb	100	92.902	Poecilia_latipinna
ENSXMAG00000003458	safb	100	97.078	ENSPMEG00000021023	safb	100	97.078	Poecilia_mexicana
ENSXMAG00000003458	safb	100	94.654	ENSPREG00000012496	safb	100	94.654	Poecilia_reticulata
ENSXMAG00000003458	safb	66	40.328	ENSPPYG00000009428	SAFB	95	38.957	Pongo_abelii
ENSXMAG00000003458	safb	64	36.258	ENSPCAG00000006475	SAFB	95	36.031	Procavia_capensis
ENSXMAG00000003458	safb	94	38.045	ENSPCOG00000014090	SAFB	78	44.785	Propithecus_coquereli
ENSXMAG00000003458	safb	74	50.877	ENSPVAG00000004913	SAFB	72	50.000	Pteropus_vampyrus
ENSXMAG00000003458	safb	99	55.948	ENSPNAG00000021838	safb	99	57.981	Pygocentrus_nattereri
ENSXMAG00000003458	safb	58	45.660	ENSRBIG00000042509	SAFB	61	59.701	Rhinopithecus_bieti
ENSXMAG00000003458	safb	94	41.617	ENSRROG00000029278	SAFB	95	39.383	Rhinopithecus_roxellana
ENSXMAG00000003458	safb	94	41.855	ENSSBOG00000026291	SAFB	95	39.405	Saimiri_boliviensis_boliviensis
ENSXMAG00000003458	safb	99	57.208	ENSSFOG00015008156	safb	99	57.274	Scleropages_formosus
ENSXMAG00000003458	safb	100	67.773	ENSSMAG00000009316	safb	100	68.839	Scophthalmus_maximus
ENSXMAG00000003458	safb	100	68.883	ENSSDUG00000009652	safb	100	70.138	Seriola_dumerili
ENSXMAG00000003458	safb	100	68.660	ENSSLDG00000001670	safb	100	67.943	Seriola_lalandi_dorsalis
ENSXMAG00000003458	safb	53	40.530	ENSSPUG00000009747	-	99	39.356	Sphenodon_punctatus
ENSXMAG00000003458	safb	98	67.465	ENSSPAG00000015682	safb	99	67.257	Stegastes_partitus
ENSXMAG00000003458	safb	64	40.772	ENSSSCG00000013522	SAFB	94	40.026	Sus_scrofa
ENSXMAG00000003458	safb	52	56.767	ENSTGUG00000000489	-	82	54.035	Taeniopygia_guttata
ENSXMAG00000003458	safb	100	68.516	ENSTRUG00000003567	safb	100	66.948	Takifugu_rubripes
ENSXMAG00000003458	safb	90	58.801	ENSTNIG00000015470	safb	100	57.803	Tetraodon_nigroviridis
ENSXMAG00000003458	safb	68	69.444	ENSTTRG00000013588	SAFB	65	69.444	Tursiops_truncatus
ENSXMAG00000003458	safb	60	52.529	ENSUMAG00000009734	SAFB	55	60.606	Ursus_maritimus
ENSXMAG00000003458	safb	53	51.613	ENSVVUG00000013720	SAFB	70	45.399	Vulpes_vulpes
ENSXMAG00000003458	safb	65	40.375	ENSXETG00000008755	safb	75	58.974	Xenopus_tropicalis