EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003481 (Gene tree)
Gene ID: 102219611
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 25370 bases
Position: chr12:14634381-14659750
Accession: 102219611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003481	PAM2	PF07145.15	7.4e-06	1	1
ENSXMAP00000032481	PAM2	PF07145.15	7.4e-06	1	1
ENSXMAP00000027533	PAM2	PF07145.15	7.4e-06	1	1
ENSXMAP00000003481	LsmAD	PF06741.13	3.5e-14	1	1
ENSXMAP00000032481	LsmAD	PF06741.13	3.5e-14	1	1
ENSXMAP00000027533	LsmAD	PF06741.13	3.5e-14	1	1
ENSXMAP00000003481	SM-ATX	PF14438.6	3e-20	1	1
ENSXMAP00000027533	SM-ATX	PF14438.6	3e-20	1	1
ENSXMAP00000032481	SM-ATX	PF14438.6	3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000024644	-	4670	XM_023343595	ENSXMAP00000032481	1032 (aa)	XP_023199363	-
ENSXMAT00000031438	-	4685	XM_023343593	ENSXMAP00000027533	1037 (aa)	XP_023199361	-
ENSXMAT00000003486	-	4667	XM_023343596	ENSXMAP00000003481	1031 (aa)	XP_023199364	M3ZMN8

Gene Model

Click here to download ENSXMAG00000003481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003481	atxn2	96	69.492	ENSG00000204842	ATXN2	96	67.857	Homo_sapiens
ENSXMAG00000003481	atxn2	100	88.920	ENSAPOG00000014663	atxn2	97	89.335	Acanthochromis_polyacanthus
ENSXMAG00000003481	atxn2	97	69.180	ENSAMEG00000013747	ATXN2	96	66.869	Ailuropoda_melanoleuca
ENSXMAG00000003481	atxn2	67	72.423	ENSACIG00000004928	atxn2	100	71.277	Amphilophus_citrinellus
ENSXMAG00000003481	atxn2	99	89.529	ENSAOCG00000001107	atxn2	97	89.139	Amphiprion_ocellaris
ENSXMAG00000003481	atxn2	99	89.433	ENSAPEG00000020250	atxn2	97	89.041	Amphiprion_percula
ENSXMAG00000003481	atxn2	97	69.281	ENSACAG00000002419	ATXN2	96	66.269	Anolis_carolinensis
ENSXMAG00000003481	atxn2	97	69.256	ENSANAG00000022522	ATXN2	96	67.532	Aotus_nancymaae
ENSXMAG00000003481	atxn2	99	72.823	ENSAMXG00000002342	atxn2	97	72.157	Astyanax_mexicanus
ENSXMAG00000003481	atxn2	95	71.127	ENSBTAG00000022069	ATXN2	96	68.506	Bos_taurus
ENSXMAG00000003481	atxn2	97	69.108	ENSCJAG00000011756	ATXN2	96	62.013	Callithrix_jacchus
ENSXMAG00000003481	atxn2	96	70.169	ENSCAFG00000008606	ATXN2	79	67.365	Canis_familiaris
ENSXMAG00000003481	atxn2	95	71.127	ENSCAFG00020017041	ATXN2	96	68.506	Canis_lupus_dingo
ENSXMAG00000003481	atxn2	97	68.671	ENSCHIG00000012141	ATXN2	79	67.802	Capra_hircus
ENSXMAG00000003481	atxn2	96	69.836	ENSTSYG00000002717	ATXN2	96	68.182	Carlito_syrichta
ENSXMAG00000003481	atxn2	72	79.646	ENSCAPG00000013332	ATXN2	82	79.646	Cavia_aperea
ENSXMAG00000003481	atxn2	97	69.453	ENSCPOG00000001390	ATXN2	92	67.094	Cavia_porcellus
ENSXMAG00000003481	atxn2	97	69.231	ENSCCAG00000026267	ATXN2	96	67.532	Cebus_capucinus
ENSXMAG00000003481	atxn2	96	69.153	ENSCATG00000017877	ATXN2	96	62.013	Cercocebus_atys
ENSXMAG00000003481	atxn2	97	69.935	ENSCLAG00000009324	ATXN2	94	67.576	Chinchilla_lanigera
ENSXMAG00000003481	atxn2	96	69.492	ENSCSAG00000002590	ATXN2	90	67.164	Chlorocebus_sabaeus
ENSXMAG00000003481	atxn2	74	63.592	ENSCHOG00000004284	ATXN2	77	63.592	Choloepus_hoffmanni
ENSXMAG00000003481	atxn2	95	58.674	ENSCPBG00000003465	ATXN2	100	59.007	Chrysemys_picta_bellii
ENSXMAG00000003481	atxn2	96	69.508	ENSCANG00000042302	ATXN2	96	67.857	Colobus_angolensis_palliatus
ENSXMAG00000003481	atxn2	95	61.986	ENSCGRG00001022603	Atxn2	80	60.180	Cricetulus_griseus_chok1gshd
ENSXMAG00000003481	atxn2	97	69.903	ENSCGRG00000015823	Atxn2	95	67.568	Cricetulus_griseus_crigri
ENSXMAG00000003481	atxn2	100	82.621	ENSCSEG00000018366	atxn2	97	83.284	Cynoglossus_semilaevis
ENSXMAG00000003481	atxn2	100	80.989	ENSCSEG00000009072	-	100	80.894	Cynoglossus_semilaevis
ENSXMAG00000003481	atxn2	97	89.625	ENSCVAG00000020160	atxn2	97	89.229	Cyprinodon_variegatus
ENSXMAG00000003481	atxn2	96	68.562	ENSDNOG00000015696	ATXN2	95	67.630	Dasypus_novemcinctus
ENSXMAG00000003481	atxn2	96	59.868	ENSDORG00000000808	Atxn2	96	57.658	Dipodomys_ordii
ENSXMAG00000003481	atxn2	90	59.804	ENSETEG00000005224	ATXN2	72	59.804	Echinops_telfairi
ENSXMAG00000003481	atxn2	97	70.227	ENSEASG00005012077	ATXN2	96	68.506	Equus_asinus_asinus
ENSXMAG00000003481	atxn2	97	70.358	ENSECAG00000014347	ATXN2	77	67.761	Equus_caballus
ENSXMAG00000003481	atxn2	74	69.180	ENSEEUG00000014635	-	71	69.180	Erinaceus_europaeus
ENSXMAG00000003481	atxn2	99	70.437	ENSELUG00000019632	atxn2	97	69.314	Esox_lucius
ENSXMAG00000003481	atxn2	96	70.169	ENSFCAG00000003178	ATXN2	96	62.987	Felis_catus
ENSXMAG00000003481	atxn2	96	70.492	ENSFDAG00000020942	ATXN2	96	68.085	Fukomys_damarensis
ENSXMAG00000003481	atxn2	91	89.717	ENSFHEG00000019561	atxn2	98	90.844	Fundulus_heteroclitus
ENSXMAG00000003481	atxn2	88	90.625	ENSGMOG00000007412	atxn2	66	90.657	Gadus_morhua
ENSXMAG00000003481	atxn2	97	67.101	ENSGALG00000004625	ATXN2	96	66.346	Gallus_gallus
ENSXMAG00000003481	atxn2	99	96.442	ENSGAFG00000003302	atxn2	99	96.442	Gambusia_affinis
ENSXMAG00000003481	atxn2	95	92.708	ENSGACG00000006295	atxn2	95	92.708	Gasterosteus_aculeatus
ENSXMAG00000003481	atxn2	95	60.040	ENSGAGG00000005014	ATXN2	100	60.576	Gopherus_agassizii
ENSXMAG00000003481	atxn2	95	70.423	ENSGGOG00000002137	ATXN2	96	67.857	Gorilla_gorilla
ENSXMAG00000003481	atxn2	99	84.976	ENSHBUG00000002921	atxn2	97	85.463	Haplochromis_burtoni
ENSXMAG00000003481	atxn2	96	70.492	ENSHGLG00100019351	ATXN2	96	68.085	Heterocephalus_glaber_male
ENSXMAG00000003481	atxn2	99	81.905	ENSHCOG00000005278	atxn2	93	81.818	Hippocampus_comes
ENSXMAG00000003481	atxn2	97	68.354	ENSIPUG00000016649	atxn2	97	67.895	Ictalurus_punctatus
ENSXMAG00000003481	atxn2	96	70.164	ENSSTOG00000000978	ATXN2	92	67.949	Ictidomys_tridecemlineatus
ENSXMAG00000003481	atxn2	100	85.674	ENSKMAG00000000980	atxn2	100	86.174	Kryptolebias_marmoratus
ENSXMAG00000003481	atxn2	59	76.849	ENSLBEG00000017484	atxn2	96	77.258	Labrus_bergylta
ENSXMAG00000003481	atxn2	97	78.896	ENSLOCG00000007880	atxn2	94	74.926	Lepisosteus_oculatus
ENSXMAG00000003481	atxn2	97	70.261	ENSLAFG00000007416	ATXN2	94	70.261	Loxodonta_africana
ENSXMAG00000003481	atxn2	96	69.153	ENSMFAG00000000374	ATXN2	96	67.532	Macaca_fascicularis
ENSXMAG00000003481	atxn2	95	70.242	ENSMMUG00000002226	ATXN2	96	67.732	Macaca_mulatta
ENSXMAG00000003481	atxn2	96	69.153	ENSMNEG00000035588	ATXN2	96	67.532	Macaca_nemestrina
ENSXMAG00000003481	atxn2	96	69.180	ENSMLEG00000024324	ATXN2	96	67.532	Mandrillus_leucophaeus
ENSXMAG00000003481	atxn2	99	86.609	ENSMAMG00000019160	atxn2	96	86.422	Mastacembelus_armatus
ENSXMAG00000003481	atxn2	99	84.880	ENSMZEG00005008476	atxn2	97	85.561	Maylandia_zebra
ENSXMAG00000003481	atxn2	97	71.569	ENSMGAG00000005288	ATXN2	96	69.091	Meleagris_gallopavo
ENSXMAG00000003481	atxn2	65	56.196	ENSMAUG00000008223	-	99	55.043	Mesocricetus_auratus
ENSXMAG00000003481	atxn2	95	70.775	ENSMICG00000013541	ATXN2	96	68.182	Microcebus_murinus
ENSXMAG00000003481	atxn2	81	71.429	ENSMOCG00000005219	Atxn2	92	67.949	Microtus_ochrogaster
ENSXMAG00000003481	atxn2	99	86.567	ENSMMOG00000013189	atxn2	96	81.410	Mola_mola
ENSXMAG00000003481	atxn2	98	68.012	ENSMODG00000012221	ATXN2	79	70.033	Monodelphis_domestica
ENSXMAG00000003481	atxn2	99	84.297	ENSMALG00000018529	atxn2	96	84.211	Monopterus_albus
ENSXMAG00000003481	atxn2	95	68.367	MGP_CAROLIEiJ_G0027692	Atxn2	91	65.774	Mus_caroli
ENSXMAG00000003481	atxn2	95	68.707	ENSMUSG00000042605	Atxn2	92	65.957	Mus_musculus
ENSXMAG00000003481	atxn2	65	55.908	MGP_PahariEiJ_G0024272	Atxn2	99	54.323	Mus_pahari
ENSXMAG00000003481	atxn2	95	68.942	MGP_SPRETEiJ_G0028690	Atxn2	92	66.239	Mus_spretus
ENSXMAG00000003481	atxn2	97	63.607	ENSMPUG00000002212	ATXN2	96	61.702	Mustela_putorius_furo
ENSXMAG00000003481	atxn2	97	70.455	ENSMLUG00000015559	ATXN2	96	68.072	Myotis_lucifugus
ENSXMAG00000003481	atxn2	98	67.508	ENSNLEG00000000484	ATXN2	96	67.857	Nomascus_leucogenys
ENSXMAG00000003481	atxn2	82	75.000	ENSMEUG00000012244	-	81	75.000	Notamacropus_eugenii
ENSXMAG00000003481	atxn2	95	61.775	ENSOPRG00000014599	ATXN2	96	59.937	Ochotona_princeps
ENSXMAG00000003481	atxn2	95	70.070	ENSODEG00000010798	ATXN2	96	67.532	Octodon_degus
ENSXMAG00000003481	atxn2	96	92.157	ENSONIG00000014521	atxn2	94	92.157	Oreochromis_niloticus
ENSXMAG00000003481	atxn2	82	76.433	ENSOANG00000004796	ATXN2	95	71.271	Ornithorhynchus_anatinus
ENSXMAG00000003481	atxn2	97	68.954	ENSOCUG00000002855	ATXN2	67	66.667	Oryctolagus_cuniculus
ENSXMAG00000003481	atxn2	94	83.232	ENSORLG00000003606	atxn2	99	83.030	Oryzias_latipes
ENSXMAG00000003481	atxn2	99	82.246	ENSORLG00020000785	atxn2	97	82.941	Oryzias_latipes_hni
ENSXMAG00000003481	atxn2	99	82.726	ENSORLG00015012345	atxn2	97	83.333	Oryzias_latipes_hsok
ENSXMAG00000003481	atxn2	99	84.038	ENSOMEG00000020080	atxn2	97	83.808	Oryzias_melastigma
ENSXMAG00000003481	atxn2	96	69.492	ENSOGAG00000000609	ATXN2	80	67.164	Otolemur_garnettii
ENSXMAG00000003481	atxn2	97	70.130	ENSOARG00000018223	ATXN2	96	67.771	Ovis_aries
ENSXMAG00000003481	atxn2	97	69.579	ENSPPAG00000028043	ATXN2	96	67.857	Pan_paniscus
ENSXMAG00000003481	atxn2	96	70.169	ENSPPRG00000003573	ATXN2	96	62.987	Panthera_pardus
ENSXMAG00000003481	atxn2	95	71.127	ENSPTIG00000021122	ATXN2	96	68.506	Panthera_tigris_altaica
ENSXMAG00000003481	atxn2	98	67.722	ENSPTRG00000029540	ATXN2	96	67.857	Pan_troglodytes
ENSXMAG00000003481	atxn2	95	70.070	ENSPANG00000017168	ATXN2	96	67.532	Papio_anubis
ENSXMAG00000003481	atxn2	97	71.820	ENSPKIG00000023134	atxn2	97	71.331	Paramormyrops_kingsleyae
ENSXMAG00000003481	atxn2	97	72.222	ENSPSIG00000002353	-	96	69.697	Pelodiscus_sinensis
ENSXMAG00000003481	atxn2	95	88.172	ENSPMGG00000005074	atxn2	95	88.172	Periophthalmus_magnuspinnatus
ENSXMAG00000003481	atxn2	81	70.616	ENSPEMG00000015340	Atxn2	92	67.234	Peromyscus_maniculatus_bairdii
ENSXMAG00000003481	atxn2	59	65.625	ENSPCIG00000006165	-	92	67.476	Phascolarctos_cinereus
ENSXMAG00000003481	atxn2	97	85.363	ENSPFOG00000005857	atxn2	97	85.476	Poecilia_formosa
ENSXMAG00000003481	atxn2	100	96.712	ENSPLAG00000015241	atxn2	100	96.712	Poecilia_latipinna
ENSXMAG00000003481	atxn2	100	97.002	ENSPMEG00000016681	atxn2	100	97.002	Poecilia_mexicana
ENSXMAG00000003481	atxn2	100	96.929	ENSPREG00000014825	atxn2	100	96.929	Poecilia_reticulata
ENSXMAG00000003481	atxn2	96	69.153	ENSPPYG00000004963	ATXN2	83	66.866	Pongo_abelii
ENSXMAG00000003481	atxn2	94	68.705	ENSPCOG00000022031	ATXN2	96	66.667	Propithecus_coquereli
ENSXMAG00000003481	atxn2	96	70.169	ENSPVAG00000013179	ATXN2	79	67.463	Pteropus_vampyrus
ENSXMAG00000003481	atxn2	60	69.231	ENSPNYG00000016981	atxn2	98	72.977	Pundamilia_nyererei
ENSXMAG00000003481	atxn2	100	74.008	ENSPNAG00000010889	atxn2	97	73.679	Pygocentrus_nattereri
ENSXMAG00000003481	atxn2	97	69.579	ENSRNOG00000001256	Atxn2	95	67.267	Rattus_norvegicus
ENSXMAG00000003481	atxn2	95	67.606	ENSRBIG00000039212	ATXN2	96	65.260	Rhinopithecus_bieti
ENSXMAG00000003481	atxn2	96	69.508	ENSRROG00000031170	ATXN2	96	67.857	Rhinopithecus_roxellana
ENSXMAG00000003481	atxn2	95	70.070	ENSSBOG00000031563	ATXN2	96	67.532	Saimiri_boliviensis_boliviensis
ENSXMAG00000003481	atxn2	97	69.805	ENSSHAG00000007304	ATXN2	96	67.470	Sarcophilus_harrisii
ENSXMAG00000003481	atxn2	95	80.000	ENSSFOG00015017229	atxn2	100	57.445	Scleropages_formosus
ENSXMAG00000003481	atxn2	93	94.035	ENSSMAG00000004627	atxn2	95	94.035	Scophthalmus_maximus
ENSXMAG00000003481	atxn2	100	87.407	ENSSDUG00000001223	atxn2	97	86.840	Seriola_dumerili
ENSXMAG00000003481	atxn2	68	68.908	ENSSARG00000006291	ATXN2	67	67.797	Sorex_araneus
ENSXMAG00000003481	atxn2	95	70.569	ENSSPUG00000010317	ATXN2	88	68.731	Sphenodon_punctatus
ENSXMAG00000003481	atxn2	99	89.559	ENSSPAG00000000377	atxn2	95	89.141	Stegastes_partitus
ENSXMAG00000003481	atxn2	96	69.831	ENSSSCG00000009834	ATXN2	91	67.463	Sus_scrofa
ENSXMAG00000003481	atxn2	97	57.761	ENSTGUG00000006497	ATXN2	100	58.098	Taeniopygia_guttata
ENSXMAG00000003481	atxn2	99	87.977	ENSTRUG00000016801	atxn2	91	88.387	Takifugu_rubripes
ENSXMAG00000003481	atxn2	83	67.692	ENSTBEG00000001985	ATXN2	83	67.692	Tupaia_belangeri
ENSXMAG00000003481	atxn2	85	66.780	ENSTTRG00000000952	ATXN2	73	64.742	Tursiops_truncatus
ENSXMAG00000003481	atxn2	96	69.492	ENSUAMG00000025295	ATXN2	90	66.766	Ursus_americanus
ENSXMAG00000003481	atxn2	95	70.423	ENSUMAG00000007315	ATXN2	96	67.857	Ursus_maritimus
ENSXMAG00000003481	atxn2	95	71.127	ENSVVUG00000016107	ATXN2	96	68.506	Vulpes_vulpes
ENSXMAG00000003481	atxn2	59	92.928	ENSXCOG00000010001	atxn2	100	93.688	Xiphophorus_couchianus