EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003500 (Gene tree)
Gene ID: 102226931
Gene Symbol: mrpl54
Alias: si:dkeyp-70f9.5
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 2626 bases
Position: chr9:16375343-16377968
Accession: 102226931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003499	Ribosomal_L37	PF08561.10	4.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003504	-	1432	XM_005806384	ENSXMAP00000003499	138 (aa)	XP_005806441	M3ZMQ6

Gene Model

Click here to download ENSXMAG00000003500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003500	mrpl54	80	54.386	ENSG00000183617	MRPL54	64	56.818	Homo_sapiens
ENSXMAG00000003500	mrpl54	100	73.913	ENSAPOG00000022643	mrpl54	100	73.913	Acanthochromis_polyacanthus
ENSXMAG00000003500	mrpl54	78	55.455	ENSAMEG00000005908	MRPL54	64	60.227	Ailuropoda_melanoleuca
ENSXMAG00000003500	mrpl54	100	75.362	ENSACIG00000006438	mrpl54	100	75.362	Amphilophus_citrinellus
ENSXMAG00000003500	mrpl54	100	73.188	ENSAOCG00000006430	mrpl54	100	73.188	Amphiprion_ocellaris
ENSXMAG00000003500	mrpl54	100	73.188	ENSAPEG00000023406	mrpl54	100	73.188	Amphiprion_percula
ENSXMAG00000003500	mrpl54	100	71.739	ENSATEG00000004969	mrpl54	100	71.739	Anabas_testudineus
ENSXMAG00000003500	mrpl54	75	56.731	ENSACAG00000017747	-	97	56.731	Anolis_carolinensis
ENSXMAG00000003500	mrpl54	80	54.386	ENSANAG00000028692	MRPL54	64	57.955	Aotus_nancymaae
ENSXMAG00000003500	mrpl54	100	75.362	ENSACLG00000001877	mrpl54	100	75.362	Astatotilapia_calliptera
ENSXMAG00000003500	mrpl54	59	73.171	ENSAMXG00000018143	mrpl54	62	70.455	Astyanax_mexicanus
ENSXMAG00000003500	mrpl54	78	52.727	ENSBTAG00000008396	MRPL54	62	60.000	Bos_taurus
ENSXMAG00000003500	mrpl54	55	43.750	WBGene00009128	mrpl-54	59	43.750	Caenorhabditis_elegans
ENSXMAG00000003500	mrpl54	80	53.509	ENSCJAG00000014998	MRPL54	64	56.818	Callithrix_jacchus
ENSXMAG00000003500	mrpl54	78	52.727	ENSCAFG00000019192	MRPL54	64	55.682	Canis_familiaris
ENSXMAG00000003500	mrpl54	78	52.727	ENSCAFG00020018333	MRPL54	64	55.682	Canis_lupus_dingo
ENSXMAG00000003500	mrpl54	78	52.727	ENSCHIG00000026538	MRPL54	62	60.000	Capra_hircus
ENSXMAG00000003500	mrpl54	69	55.789	ENSCAPG00000012166	MRPL54	93	57.955	Cavia_aperea
ENSXMAG00000003500	mrpl54	78	53.636	ENSCPOG00000031082	MRPL54	64	57.955	Cavia_porcellus
ENSXMAG00000003500	mrpl54	80	52.632	ENSCCAG00000000138	MRPL54	64	55.682	Cebus_capucinus
ENSXMAG00000003500	mrpl54	80	55.263	ENSCATG00000014066	MRPL54	62	61.176	Cercocebus_atys
ENSXMAG00000003500	mrpl54	83	54.386	ENSCLAG00000007908	MRPL54	84	54.386	Chinchilla_lanigera
ENSXMAG00000003500	mrpl54	80	55.263	ENSCSAG00000010950	MRPL54	62	61.176	Chlorocebus_sabaeus
ENSXMAG00000003500	mrpl54	100	50.725	ENSCPBG00000017103	MRPL54	75	50.725	Chrysemys_picta_bellii
ENSXMAG00000003500	mrpl54	70	40.206	ENSCING00000019896	-	59	40.476	Ciona_intestinalis
ENSXMAG00000003500	mrpl54	65	41.111	ENSCSAVG00000009604	-	59	41.176	Ciona_savignyi
ENSXMAG00000003500	mrpl54	97	48.905	ENSCANG00000027841	MRPL54	64	59.091	Colobus_angolensis_palliatus
ENSXMAG00000003500	mrpl54	100	46.809	ENSCGRG00001019482	Mrpl54	64	59.091	Cricetulus_griseus_chok1gshd
ENSXMAG00000003500	mrpl54	100	46.809	ENSCGRG00000010923	Mrpl54	64	59.091	Cricetulus_griseus_crigri
ENSXMAG00000003500	mrpl54	88	70.248	ENSCSEG00000019883	mrpl54	80	70.248	Cynoglossus_semilaevis
ENSXMAG00000003500	mrpl54	100	82.143	ENSCVAG00000002210	mrpl54	100	82.143	Cyprinodon_variegatus
ENSXMAG00000003500	mrpl54	77	72.642	ENSDARG00000071468	mrpl54	79	72.642	Danio_rerio
ENSXMAG00000003500	mrpl54	60	54.217	ENSDNOG00000007387	MRPL54	63	53.488	Dasypus_novemcinctus
ENSXMAG00000003500	mrpl54	64	54.545	ENSDORG00000005326	Mrpl54	66	54.545	Dipodomys_ordii
ENSXMAG00000003500	mrpl54	57	48.718	FBgn0034579	mRpL54	59	48.718	Drosophila_melanogaster
ENSXMAG00000003500	mrpl54	83	51.695	ENSETEG00000017500	MRPL54	66	56.818	Echinops_telfairi
ENSXMAG00000003500	mrpl54	68	53.191	ENSEBUG00000003179	mrpl54	75	51.724	Eptatretus_burgeri
ENSXMAG00000003500	mrpl54	100	47.143	ENSEASG00005022283	MRPL54	100	43.448	Equus_asinus_asinus
ENSXMAG00000003500	mrpl54	80	52.212	ENSECAG00000001515	MRPL54	62	58.824	Equus_caballus
ENSXMAG00000003500	mrpl54	100	60.870	ENSELUG00000022358	mrpl54	100	60.870	Esox_lucius
ENSXMAG00000003500	mrpl54	100	48.936	ENSFCAG00000007144	MRPL54	100	47.518	Felis_catus
ENSXMAG00000003500	mrpl54	70	54.639	ENSFALG00000011660	MRPL54	80	55.814	Ficedula_albicollis
ENSXMAG00000003500	mrpl54	80	53.509	ENSFDAG00000020803	MRPL54	64	57.955	Fukomys_damarensis
ENSXMAG00000003500	mrpl54	86	54.167	ENSGALG00000027611	MRPL54	99	54.167	Gallus_gallus
ENSXMAG00000003500	mrpl54	100	93.478	ENSGAFG00000016193	mrpl54	100	93.478	Gambusia_affinis
ENSXMAG00000003500	mrpl54	68	62.766	ENSGAGG00000020238	MRPL54	91	46.923	Gopherus_agassizii
ENSXMAG00000003500	mrpl54	80	55.263	ENSGGOG00000014722	MRPL54	64	57.955	Gorilla_gorilla
ENSXMAG00000003500	mrpl54	96	77.444	ENSHBUG00000009028	mrpl54	79	77.444	Haplochromis_burtoni
ENSXMAG00000003500	mrpl54	100	47.101	ENSHGLG00000006157	MRPL54	66	56.818	Heterocephalus_glaber_female
ENSXMAG00000003500	mrpl54	100	47.101	ENSHGLG00100000788	MRPL54	66	56.818	Heterocephalus_glaber_male
ENSXMAG00000003500	mrpl54	94	67.939	ENSHCOG00000000536	mrpl54	89	70.079	Hippocampus_comes
ENSXMAG00000003500	mrpl54	91	56.618	ENSIPUG00000024854	mrpl54	98	58.824	Ictalurus_punctatus
ENSXMAG00000003500	mrpl54	69	57.895	ENSSTOG00000022378	MRPL54	90	60.227	Ictidomys_tridecemlineatus
ENSXMAG00000003500	mrpl54	80	55.652	ENSJJAG00000020405	Mrpl54	61	61.905	Jaculus_jaculus
ENSXMAG00000003500	mrpl54	99	72.993	ENSKMAG00000022310	mrpl54	99	69.343	Kryptolebias_marmoratus
ENSXMAG00000003500	mrpl54	100	73.188	ENSLBEG00000005935	mrpl54	100	73.188	Labrus_bergylta
ENSXMAG00000003500	mrpl54	86	59.836	ENSLACG00000013912	MRPL54	92	59.350	Latimeria_chalumnae
ENSXMAG00000003500	mrpl54	78	67.290	ENSLOCG00000003860	mrpl54	78	66.667	Lepisosteus_oculatus
ENSXMAG00000003500	mrpl54	73	54.286	ENSLAFG00000029657	MRPL54	63	57.955	Loxodonta_africana
ENSXMAG00000003500	mrpl54	80	55.263	ENSMFAG00000003311	MRPL54	62	61.176	Macaca_fascicularis
ENSXMAG00000003500	mrpl54	80	55.263	ENSMMUG00000044080	MRPL54	62	61.176	Macaca_mulatta
ENSXMAG00000003500	mrpl54	80	55.263	ENSMNEG00000039499	MRPL54	62	61.176	Macaca_nemestrina
ENSXMAG00000003500	mrpl54	100	73.913	ENSMAMG00000003291	mrpl54	100	73.913	Mastacembelus_armatus
ENSXMAG00000003500	mrpl54	96	76.692	ENSMZEG00005009023	mrpl54	79	76.692	Maylandia_zebra
ENSXMAG00000003500	mrpl54	68	58.511	ENSMGAG00000000951	MRPL54	89	59.302	Meleagris_gallopavo
ENSXMAG00000003500	mrpl54	73	62.376	ENSMAUG00000009543	Mrpl54	75	62.376	Mesocricetus_auratus
ENSXMAG00000003500	mrpl54	62	60.000	ENSMICG00000034581	MRPL54	54	60.000	Microcebus_murinus
ENSXMAG00000003500	mrpl54	73	58.654	ENSMOCG00000017895	Mrpl54	64	60.227	Microtus_ochrogaster
ENSXMAG00000003500	mrpl54	100	68.116	ENSMMOG00000020370	mrpl54	100	68.116	Mola_mola
ENSXMAG00000003500	mrpl54	74	58.252	ENSMODG00000000602	MRPL54	65	56.818	Monodelphis_domestica
ENSXMAG00000003500	mrpl54	96	73.684	ENSMALG00000020280	mrpl54	96	73.684	Monopterus_albus
ENSXMAG00000003500	mrpl54	73	59.406	MGP_CAROLIEiJ_G0015629	Mrpl54	65	59.091	Mus_caroli
ENSXMAG00000003500	mrpl54	62	58.824	ENSMUSG00000034932	Mrpl54	65	57.955	Mus_musculus
ENSXMAG00000003500	mrpl54	73	58.416	MGP_PahariEiJ_G0031042	Mrpl54	65	56.818	Mus_pahari
ENSXMAG00000003500	mrpl54	73	59.406	MGP_SPRETEiJ_G0016447	Mrpl54	65	59.091	Mus_spretus
ENSXMAG00000003500	mrpl54	60	61.446	ENSMLUG00000010801	MRPL54	83	57.955	Myotis_lucifugus
ENSXMAG00000003500	mrpl54	64	53.409	ENSNGAG00000021044	Mrpl54	63	53.409	Nannospalax_galili
ENSXMAG00000003500	mrpl54	100	74.638	ENSNBRG00000000568	mrpl54	100	74.638	Neolamprologus_brichardi
ENSXMAG00000003500	mrpl54	73	61.765	ENSMEUG00000013033	MRPL54	77	58.416	Notamacropus_eugenii
ENSXMAG00000003500	mrpl54	86	51.261	ENSOPRG00000010035	-	88	50.420	Ochotona_princeps
ENSXMAG00000003500	mrpl54	83	51.695	ENSODEG00000013969	MRPL54	64	55.682	Octodon_degus
ENSXMAG00000003500	mrpl54	100	75.362	ENSONIG00000002312	mrpl54	89	75.362	Oreochromis_niloticus
ENSXMAG00000003500	mrpl54	68	80.851	ENSORLG00000016960	mrpl54	69	81.395	Oryzias_latipes
ENSXMAG00000003500	mrpl54	72	79.000	ENSORLG00020014934	mrpl54	83	82.558	Oryzias_latipes_hni
ENSXMAG00000003500	mrpl54	70	78.125	ENSORLG00015010788	mrpl54	69	78.409	Oryzias_latipes_hsok
ENSXMAG00000003500	mrpl54	100	70.290	ENSOMEG00000009005	mrpl54	100	70.290	Oryzias_melastigma
ENSXMAG00000003500	mrpl54	99	51.773	ENSOGAG00000026254	-	64	64.368	Otolemur_garnettii
ENSXMAG00000003500	mrpl54	73	60.577	ENSOGAG00000033519	-	64	63.636	Otolemur_garnettii
ENSXMAG00000003500	mrpl54	80	54.386	ENSPPAG00000042418	MRPL54	64	56.818	Pan_paniscus
ENSXMAG00000003500	mrpl54	100	48.201	ENSPPRG00000012325	MRPL54	100	47.101	Panthera_pardus
ENSXMAG00000003500	mrpl54	100	48.611	ENSPTIG00000017727	MRPL54	100	47.917	Panthera_tigris_altaica
ENSXMAG00000003500	mrpl54	80	54.386	ENSPTRG00000010276	MRPL54	64	56.818	Pan_troglodytes
ENSXMAG00000003500	mrpl54	80	55.263	ENSPANG00000033944	MRPL54	62	61.176	Papio_anubis
ENSXMAG00000003500	mrpl54	78	71.296	ENSPKIG00000009984	mrpl54	63	65.741	Paramormyrops_kingsleyae
ENSXMAG00000003500	mrpl54	68	59.574	ENSPSIG00000013587	MRPL54	93	57.955	Pelodiscus_sinensis
ENSXMAG00000003500	mrpl54	100	71.014	ENSPMGG00000015972	mrpl54	90	71.014	Periophthalmus_magnuspinnatus
ENSXMAG00000003500	mrpl54	73	57.692	ENSPEMG00000022929	Mrpl54	64	60.227	Peromyscus_maniculatus_bairdii
ENSXMAG00000003500	mrpl54	100	46.043	ENSPCIG00000025383	MRPL54	63	56.471	Phascolarctos_cinereus
ENSXMAG00000003500	mrpl54	100	92.754	ENSPFOG00000007409	mrpl54	100	92.754	Poecilia_formosa
ENSXMAG00000003500	mrpl54	100	92.754	ENSPLAG00000001640	mrpl54	100	92.754	Poecilia_latipinna
ENSXMAG00000003500	mrpl54	100	92.754	ENSPLAG00000001633	mrpl54	100	92.754	Poecilia_latipinna
ENSXMAG00000003500	mrpl54	100	92.754	ENSPMEG00000021078	mrpl54	100	92.754	Poecilia_mexicana
ENSXMAG00000003500	mrpl54	100	92.754	ENSPMEG00000021068	mrpl54	100	92.754	Poecilia_mexicana
ENSXMAG00000003500	mrpl54	100	94.203	ENSPREG00000012425	mrpl54	100	94.203	Poecilia_reticulata
ENSXMAG00000003500	mrpl54	80	56.140	ENSPPYG00000009386	MRPL54	64	59.091	Pongo_abelii
ENSXMAG00000003500	mrpl54	95	48.507	ENSPCAG00000000690	MRPL54	64	55.682	Procavia_capensis
ENSXMAG00000003500	mrpl54	95	52.239	ENSPCOG00000027550	MRPL54	64	63.636	Propithecus_coquereli
ENSXMAG00000003500	mrpl54	96	75.940	ENSPNYG00000022006	mrpl54	79	75.940	Pundamilia_nyererei
ENSXMAG00000003500	mrpl54	79	67.890	ENSPNAG00000000077	mrpl54	78	67.890	Pygocentrus_nattereri
ENSXMAG00000003500	mrpl54	73	57.426	ENSRNOG00000020464	Mrpl54	75	57.426	Rattus_norvegicus
ENSXMAG00000003500	mrpl54	80	55.263	ENSRBIG00000027038	MRPL54	65	59.091	Rhinopithecus_bieti
ENSXMAG00000003500	mrpl54	80	55.263	ENSRROG00000018776	MRPL54	65	59.091	Rhinopithecus_roxellana
ENSXMAG00000003500	mrpl54	80	52.632	ENSSBOG00000028081	MRPL54	64	56.818	Saimiri_boliviensis_boliviensis
ENSXMAG00000003500	mrpl54	64	56.818	ENSSHAG00000002557	MRPL54	65	56.818	Sarcophilus_harrisii
ENSXMAG00000003500	mrpl54	96	55.639	ENSSFOG00015008073	mrpl54	91	54.887	Scleropages_formosus
ENSXMAG00000003500	mrpl54	100	73.913	ENSSMAG00000009226	mrpl54	100	73.913	Scophthalmus_maximus
ENSXMAG00000003500	mrpl54	100	73.188	ENSSDUG00000009545	mrpl54	100	71.739	Seriola_dumerili
ENSXMAG00000003500	mrpl54	100	75.362	ENSSLDG00000001781	mrpl54	100	73.913	Seriola_lalandi_dorsalis
ENSXMAG00000003500	mrpl54	68	61.702	ENSSPUG00000015361	MRPL54	67	61.364	Sphenodon_punctatus
ENSXMAG00000003500	mrpl54	100	69.565	ENSSPAG00000003775	-	100	69.565	Stegastes_partitus
ENSXMAG00000003500	mrpl54	100	69.565	ENSSPAG00000015601	mrpl54	100	69.565	Stegastes_partitus
ENSXMAG00000003500	mrpl54	83	50.000	ENSSSCG00000024242	MRPL54	86	49.153	Sus_scrofa
ENSXMAG00000003500	mrpl54	100	70.290	ENSTRUG00000004609	mrpl54	100	70.290	Takifugu_rubripes
ENSXMAG00000003500	mrpl54	100	68.841	ENSTNIG00000015468	mrpl54	100	68.841	Tetraodon_nigroviridis
ENSXMAG00000003500	mrpl54	80	51.351	ENSTTRG00000004410	MRPL54	82	51.351	Tursiops_truncatus
ENSXMAG00000003500	mrpl54	78	55.455	ENSUAMG00000021572	MRPL54	64	60.227	Ursus_americanus
ENSXMAG00000003500	mrpl54	78	56.364	ENSUMAG00000007416	MRPL54	64	60.227	Ursus_maritimus
ENSXMAG00000003500	mrpl54	74	54.286	ENSVVUG00000004420	MRPL54	64	55.682	Vulpes_vulpes
ENSXMAG00000003500	mrpl54	73	62.376	ENSXETG00000033250	MRPL54	65	60.920	Xenopus_tropicalis