EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003508 (Gene tree)
Gene ID: 102229199
Gene Symbol: -
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 2285 bases
Position: chr12:27162130-27164414
Accession: 102229199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003512	RNase_P_Rpp14	PF01900.19	9.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003517	-	813	XM_005815758	ENSXMAP00000003512	192 (aa)	XP_005815815	M3ZMR9

Gene Model

Click here to download ENSXMAG00000003508's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003508	-	74	59.155	ENSG00000167272	POP5	87	59.155	Homo_sapiens
ENSXMAG00000003508	-	78	81.879	ENSAPOG00000023686	POP5	89	81.879	Acanthochromis_polyacanthus
ENSXMAG00000003508	-	80	56.410	ENSAMEG00000008503	POP5	90	56.129	Ailuropoda_melanoleuca
ENSXMAG00000003508	-	81	84.516	ENSACIG00000018362	pop5	90	86.577	Amphilophus_citrinellus
ENSXMAG00000003508	-	81	80.000	ENSAOCG00000001930	pop5	88	82.993	Amphiprion_ocellaris
ENSXMAG00000003508	-	81	80.645	ENSAPEG00000006795	pop5	88	83.673	Amphiprion_percula
ENSXMAG00000003508	-	81	78.205	ENSATEG00000016792	pop5	89	81.757	Anabas_testudineus
ENSXMAG00000003508	-	85	50.920	ENSACAG00000003091	POP5	90	52.349	Anolis_carolinensis
ENSXMAG00000003508	-	79	54.305	ENSANAG00000023744	POP5	87	58.451	Aotus_nancymaae
ENSXMAG00000003508	-	77	85.135	ENSACLG00000021131	-	88	85.135	Astatotilapia_calliptera
ENSXMAG00000003508	-	77	61.224	ENSAMXG00000038175	pop5	86	60.811	Astyanax_mexicanus
ENSXMAG00000003508	-	85	54.601	ENSBTAG00000005385	POP5	84	58.451	Bos_taurus
ENSXMAG00000003508	-	74	59.859	ENSCJAG00000001309	POP5	87	59.859	Callithrix_jacchus
ENSXMAG00000003508	-	80	57.792	ENSCAFG00000010389	POP5	90	57.516	Canis_familiaris
ENSXMAG00000003508	-	80	57.792	ENSCAFG00020020663	POP5	90	57.516	Canis_lupus_dingo
ENSXMAG00000003508	-	85	53.988	ENSCHIG00000016402	POP5	84	57.746	Capra_hircus
ENSXMAG00000003508	-	74	59.155	ENSTSYG00000027616	POP5	84	59.155	Carlito_syrichta
ENSXMAG00000003508	-	58	53.982	ENSCAPG00000016873	POP5	77	60.920	Cavia_aperea
ENSXMAG00000003508	-	87	53.571	ENSCPOG00000012337	POP5	85	57.746	Cavia_porcellus
ENSXMAG00000003508	-	74	58.451	ENSCCAG00000023154	POP5	87	58.451	Cebus_capucinus
ENSXMAG00000003508	-	74	59.155	ENSCATG00000036825	POP5	87	59.155	Cercocebus_atys
ENSXMAG00000003508	-	82	56.329	ENSCLAG00000007808	POP5	84	58.451	Chinchilla_lanigera
ENSXMAG00000003508	-	74	59.155	ENSCSAG00000002246	POP5	87	59.155	Chlorocebus_sabaeus
ENSXMAG00000003508	-	74	47.887	ENSCHOG00000013969	POP5	86	47.619	Choloepus_hoffmanni
ENSXMAG00000003508	-	87	57.485	ENSCPBG00000011331	POP5	88	62.585	Chrysemys_picta_bellii
ENSXMAG00000003508	-	74	58.451	ENSCANG00000028001	POP5	87	58.451	Colobus_angolensis_palliatus
ENSXMAG00000003508	-	84	55.215	ENSCGRG00001017974	Pop5	84	58.451	Cricetulus_griseus_chok1gshd
ENSXMAG00000003508	-	84	55.215	ENSCGRG00000010102	Pop5	84	58.451	Cricetulus_griseus_crigri
ENSXMAG00000003508	-	80	72.078	ENSCSEG00000008332	-	89	73.826	Cynoglossus_semilaevis
ENSXMAG00000003508	-	70	77.037	ENSCSEG00000011103	pop5	90	77.037	Cynoglossus_semilaevis
ENSXMAG00000003508	-	86	57.396	ENSCVAG00000009152	-	90	57.692	Cyprinodon_variegatus
ENSXMAG00000003508	-	77	58.000	ENSDARG00000053452	pop5	89	58.000	Danio_rerio
ENSXMAG00000003508	-	74	57.746	ENSDNOG00000045952	-	86	57.143	Dasypus_novemcinctus
ENSXMAG00000003508	-	76	57.143	ENSDNOG00000012668	-	80	56.579	Dasypus_novemcinctus
ENSXMAG00000003508	-	74	59.155	ENSDORG00000029401	Pop5	88	58.784	Dipodomys_ordii
ENSXMAG00000003508	-	84	52.147	ENSETEG00000009283	POP5	84	55.634	Echinops_telfairi
ENSXMAG00000003508	-	83	38.750	ENSEBUG00000016369	pop5	88	41.667	Eptatretus_burgeri
ENSXMAG00000003508	-	74	57.042	ENSEASG00005004714	POP5	84	57.042	Equus_asinus_asinus
ENSXMAG00000003508	-	74	57.042	ENSECAG00000010012	POP5	84	57.042	Equus_caballus
ENSXMAG00000003508	-	86	66.061	ENSELUG00000023394	pop5	91	69.388	Esox_lucius
ENSXMAG00000003508	-	85	56.098	ENSFCAG00000042614	POP5	90	57.516	Felis_catus
ENSXMAG00000003508	-	77	61.486	ENSFALG00000007537	POP5	89	61.486	Ficedula_albicollis
ENSXMAG00000003508	-	74	57.746	ENSFDAG00000009972	POP5	88	57.432	Fukomys_damarensis
ENSXMAG00000003508	-	87	86.826	ENSFHEG00000022341	pop5	92	88.158	Fundulus_heteroclitus
ENSXMAG00000003508	-	68	68.702	ENSGMOG00000001073	pop5	99	68.702	Gadus_morhua
ENSXMAG00000003508	-	74	55.634	ENSGALG00000007124	POP5	54	52.564	Gallus_gallus
ENSXMAG00000003508	-	87	97.006	ENSGAFG00000005937	-	100	97.006	Gambusia_affinis
ENSXMAG00000003508	-	85	74.847	ENSGACG00000012710	-	91	81.081	Gasterosteus_aculeatus
ENSXMAG00000003508	-	87	57.485	ENSGAGG00000016005	POP5	88	62.585	Gopherus_agassizii
ENSXMAG00000003508	-	74	59.155	ENSGGOG00000013505	POP5	87	59.155	Gorilla_gorilla
ENSXMAG00000003508	-	77	85.811	ENSHBUG00000011718	-	88	85.811	Haplochromis_burtoni
ENSXMAG00000003508	-	87	55.357	ENSHGLG00000011786	POP5	89	58.000	Heterocephalus_glaber_female
ENSXMAG00000003508	-	87	55.357	ENSHGLG00100014284	POP5	89	58.000	Heterocephalus_glaber_male
ENSXMAG00000003508	-	77	76.190	ENSHCOG00000011809	pop5	90	76.190	Hippocampus_comes
ENSXMAG00000003508	-	77	60.544	ENSIPUG00000003437	pop5	88	60.544	Ictalurus_punctatus
ENSXMAG00000003508	-	82	56.329	ENSSTOG00000012577	POP5	91	56.209	Ictidomys_tridecemlineatus
ENSXMAG00000003508	-	74	61.268	ENSJJAG00000001080	Pop5	86	60.544	Jaculus_jaculus
ENSXMAG00000003508	-	78	83.221	ENSKMAG00000011158	-	88	83.221	Kryptolebias_marmoratus
ENSXMAG00000003508	-	82	75.316	ENSLBEG00000008652	pop5	81	77.703	Labrus_bergylta
ENSXMAG00000003508	-	86	52.121	ENSLACG00000018188	POP5	91	54.422	Latimeria_chalumnae
ENSXMAG00000003508	-	77	59.864	ENSLOCG00000002924	pop5	88	59.864	Lepisosteus_oculatus
ENSXMAG00000003508	-	85	55.422	ENSLAFG00000014545	POP5	88	58.000	Loxodonta_africana
ENSXMAG00000003508	-	74	59.155	ENSMFAG00000045933	POP5	90	59.155	Macaca_fascicularis
ENSXMAG00000003508	-	74	59.155	ENSMMUG00000040120	POP5	87	59.155	Macaca_mulatta
ENSXMAG00000003508	-	74	59.155	ENSMNEG00000041716	POP5	87	59.155	Macaca_nemestrina
ENSXMAG00000003508	-	74	58.451	ENSMLEG00000029377	POP5	87	58.451	Mandrillus_leucophaeus
ENSXMAG00000003508	-	80	81.046	ENSMAMG00000002108	pop5	90	81.579	Mastacembelus_armatus
ENSXMAG00000003508	-	77	85.811	ENSMZEG00005000069	-	88	85.811	Maylandia_zebra
ENSXMAG00000003508	-	84	54.601	ENSMAUG00000019670	Pop5	84	57.746	Mesocricetus_auratus
ENSXMAG00000003508	-	85	50.581	ENSMICG00000008692	POP5	94	52.174	Microcebus_murinus
ENSXMAG00000003508	-	74	57.042	ENSMOCG00000013322	Pop5	84	57.042	Microtus_ochrogaster
ENSXMAG00000003508	-	76	80.822	ENSMMOG00000010471	pop5	90	80.272	Mola_mola
ENSXMAG00000003508	-	89	55.172	ENSMODG00000003066	POP5	63	55.769	Monodelphis_domestica
ENSXMAG00000003508	-	78	82.667	ENSMALG00000017797	-	90	82.667	Monopterus_albus
ENSXMAG00000003508	-	84	55.215	MGP_CAROLIEiJ_G0027618	Pop5	84	58.451	Mus_caroli
ENSXMAG00000003508	-	84	55.215	ENSMUSG00000060152	Pop5	84	58.451	Mus_musculus
ENSXMAG00000003508	-	84	53.988	MGP_PahariEiJ_G0024198	Pop5	84	57.042	Mus_pahari
ENSXMAG00000003508	-	84	53.988	MGP_SPRETEiJ_G0028616	Pop5	84	57.042	Mus_spretus
ENSXMAG00000003508	-	78	55.629	ENSMPUG00000003221	POP5	91	55.556	Mustela_putorius_furo
ENSXMAG00000003508	-	74	59.028	ENSMLUG00000014657	POP5	86	59.028	Myotis_lucifugus
ENSXMAG00000003508	-	74	59.859	ENSNGAG00000002594	Pop5	83	59.859	Nannospalax_galili
ENSXMAG00000003508	-	72	70.290	ENSNBRG00000001020	-	100	70.290	Neolamprologus_brichardi
ENSXMAG00000003508	-	74	59.155	ENSNLEG00000015839	POP5	87	59.155	Nomascus_leucogenys
ENSXMAG00000003508	-	84	54.321	ENSMEUG00000015288	POP5	91	57.143	Notamacropus_eugenii
ENSXMAG00000003508	-	74	58.451	ENSOPRG00000004327	POP5	83	58.451	Ochotona_princeps
ENSXMAG00000003508	-	81	50.968	ENSODEG00000010351	-	88	53.571	Octodon_degus
ENSXMAG00000003508	-	74	57.746	ENSODEG00000006549	-	84	57.746	Octodon_degus
ENSXMAG00000003508	-	77	85.811	ENSONIG00000011172	pop5	88	85.811	Oreochromis_niloticus
ENSXMAG00000003508	-	74	58.451	ENSOCUG00000006537	POP5	83	58.451	Oryctolagus_cuniculus
ENSXMAG00000003508	-	85	71.341	ENSORLG00000014745	pop5	91	75.658	Oryzias_latipes
ENSXMAG00000003508	-	87	70.659	ENSORLG00020001168	pop5	87	77.241	Oryzias_latipes_hni
ENSXMAG00000003508	-	87	69.231	ENSORLG00015013535	pop5	91	74.026	Oryzias_latipes_hsok
ENSXMAG00000003508	-	86	73.333	ENSOMEG00000017643	pop5	90	76.974	Oryzias_melastigma
ENSXMAG00000003508	-	77	56.463	ENSOGAG00000008528	POP5	90	56.463	Otolemur_garnettii
ENSXMAG00000003508	-	85	53.333	ENSOARG00000012764	POP5	84	56.944	Ovis_aries
ENSXMAG00000003508	-	74	59.155	ENSPPAG00000043719	POP5	87	59.155	Pan_paniscus
ENSXMAG00000003508	-	85	56.098	ENSPPRG00000006474	POP5	90	57.516	Panthera_pardus
ENSXMAG00000003508	-	85	56.098	ENSPTIG00000012194	POP5	90	57.516	Panthera_tigris_altaica
ENSXMAG00000003508	-	74	59.155	ENSPTRG00000005543	POP5	87	59.155	Pan_troglodytes
ENSXMAG00000003508	-	74	59.155	ENSPANG00000014166	POP5	87	59.155	Papio_anubis
ENSXMAG00000003508	-	77	70.270	ENSPKIG00000025154	pop5	89	70.270	Paramormyrops_kingsleyae
ENSXMAG00000003508	-	58	60.360	ENSPSIG00000013154	POP5	76	65.957	Pelodiscus_sinensis
ENSXMAG00000003508	-	86	72.121	ENSPMGG00000000812	-	90	75.000	Periophthalmus_magnuspinnatus
ENSXMAG00000003508	-	84	55.215	ENSPEMG00000017493	Pop5	84	58.451	Peromyscus_maniculatus_bairdii
ENSXMAG00000003508	-	80	89.032	ENSPFOG00000013000	pop5	94	89.216	Poecilia_formosa
ENSXMAG00000003508	-	80	90.260	ENSPLAG00000014070	pop5	91	90.789	Poecilia_latipinna
ENSXMAG00000003508	-	79	92.763	ENSPMEG00000024039	pop5	91	92.763	Poecilia_mexicana
ENSXMAG00000003508	-	79	92.763	ENSPMEG00000012863	POP5	91	92.763	Poecilia_mexicana
ENSXMAG00000003508	-	80	92.857	ENSPREG00000020151	pop5	91	93.421	Poecilia_reticulata
ENSXMAG00000003508	-	77	59.459	ENSPPYG00000005036	POP5	77	59.459	Pongo_abelii
ENSXMAG00000003508	-	54	58.654	ENSPCAG00000004788	POP5	100	58.654	Procavia_capensis
ENSXMAG00000003508	-	74	59.155	ENSPCOG00000017618	POP5	84	59.155	Propithecus_coquereli
ENSXMAG00000003508	-	74	58.451	ENSPVAG00000002233	POP5	87	58.108	Pteropus_vampyrus
ENSXMAG00000003508	-	77	85.811	ENSPNYG00000002679	pop5	88	85.811	Pundamilia_nyererei
ENSXMAG00000003508	-	76	59.589	ENSPNAG00000012662	pop5	82	59.589	Pygocentrus_nattereri
ENSXMAG00000003508	-	82	54.717	ENSRNOG00000001199	Pop5	84	57.042	Rattus_norvegicus
ENSXMAG00000003508	-	74	58.451	ENSRBIG00000043505	POP5	90	58.451	Rhinopithecus_bieti
ENSXMAG00000003508	-	74	58.451	ENSRROG00000045063	POP5	90	58.451	Rhinopithecus_roxellana
ENSXMAG00000003508	-	74	59.155	ENSSBOG00000032691	POP5	99	59.259	Saimiri_boliviensis_boliviensis
ENSXMAG00000003508	-	77	68.027	ENSSFOG00015005630	pop5	87	69.403	Scleropages_formosus
ENSXMAG00000003508	-	81	77.070	ENSSMAG00000018868	pop5	89	78.808	Scophthalmus_maximus
ENSXMAG00000003508	-	87	79.042	ENSSDUG00000001282	-	89	81.081	Seriola_dumerili
ENSXMAG00000003508	-	87	79.042	ENSSLDG00000017031	pop5	89	81.757	Seriola_lalandi_dorsalis
ENSXMAG00000003508	-	87	79.042	ENSSLDG00000003801	-	89	81.757	Seriola_lalandi_dorsalis
ENSXMAG00000003508	-	54	56.731	ENSSARG00000005564	POP5	64	56.731	Sorex_araneus
ENSXMAG00000003508	-	77	61.224	ENSSPUG00000015531	POP5	88	61.224	Sphenodon_punctatus
ENSXMAG00000003508	-	78	82.550	ENSSPAG00000015306	pop5	89	82.550	Stegastes_partitus
ENSXMAG00000003508	-	85	54.601	ENSSSCG00000009912	POP5	84	58.451	Sus_scrofa
ENSXMAG00000003508	-	86	55.422	ENSTGUG00000009602	POP5	90	59.459	Taeniopygia_guttata
ENSXMAG00000003508	-	85	78.049	ENSTRUG00000016214	pop5	90	81.208	Takifugu_rubripes
ENSXMAG00000003508	-	85	71.951	ENSTNIG00000011465	pop5	89	76.974	Tetraodon_nigroviridis
ENSXMAG00000003508	-	74	57.746	ENSTBEG00000010131	POP5	84	57.746	Tupaia_belangeri
ENSXMAG00000003508	-	74	58.451	ENSTTRG00000000153	POP5	84	58.451	Tursiops_truncatus
ENSXMAG00000003508	-	85	52.695	ENSUAMG00000015541	POP5	77	52.410	Ursus_americanus
ENSXMAG00000003508	-	80	56.494	ENSUMAG00000006137	POP5	90	56.209	Ursus_maritimus
ENSXMAG00000003508	-	77	56.757	ENSVPAG00000010365	POP5	87	56.757	Vicugna_pacos
ENSXMAG00000003508	-	80	57.792	ENSVVUG00000021154	POP5	90	57.516	Vulpes_vulpes
ENSXMAG00000003508	-	60	54.783	ENSXETG00000031793	POP5	85	59.794	Xenopus_tropicalis