EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003519 (Gene tree)
Gene ID: 102218559
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: E3 SUMO-protein ligase RanBP2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 33015 bases
Position: chr7:22054657-22087671
Accession: 102218559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003551	zf-RanBP	PF00641.18	2.5e-36	1	5
ENSXMAP00000003551	zf-RanBP	PF00641.18	2.5e-36	2	5
ENSXMAP00000003551	zf-RanBP	PF00641.18	2.5e-36	3	5
ENSXMAP00000003551	zf-RanBP	PF00641.18	2.5e-36	4	5
ENSXMAP00000003551	zf-RanBP	PF00641.18	2.5e-36	5	5
ENSXMAP00000034618	zf-RanBP	PF00641.18	2.8e-36	1	5
ENSXMAP00000034618	zf-RanBP	PF00641.18	2.8e-36	2	5
ENSXMAP00000034618	zf-RanBP	PF00641.18	2.8e-36	3	5
ENSXMAP00000034618	zf-RanBP	PF00641.18	2.8e-36	4	5
ENSXMAP00000034618	zf-RanBP	PF00641.18	2.8e-36	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000035178	-	480	-	ENSXMAP00000041819	159 (aa)	-	-
ENSXMAT00000027397	-	8751	-	ENSXMAP00000034618	2916 (aa)	-	-
ENSXMAT00000003556	-	8556	XM_023336510	ENSXMAP00000003551	2851 (aa)	XP_023192278	M3ZMV8
ENSXMAT00000022999	-	483	-	ENSXMAP00000035959	160 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000003519's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003519	si:ch1073-55a19.2	100	52.941	ENSG00000153201	RANBP2	90	69.565	Homo_sapiens
ENSXMAG00000003519	si:ch1073-55a19.2	100	75.946	ENSAPOG00000017146	si:ch1073-55a19.2	100	83.051	Acanthochromis_polyacanthus
ENSXMAG00000003519	si:ch1073-55a19.2	99	56.296	ENSAMEG00000013078	RANBP2	99	55.985	Ailuropoda_melanoleuca
ENSXMAG00000003519	si:ch1073-55a19.2	100	72.636	ENSACIG00000001203	si:ch1073-55a19.2	100	73.421	Amphilophus_citrinellus
ENSXMAG00000003519	si:ch1073-55a19.2	100	76.443	ENSAPEG00000012495	si:ch1073-55a19.2	99	82.367	Amphiprion_percula
ENSXMAG00000003519	si:ch1073-55a19.2	100	74.103	ENSATEG00000001716	si:ch1073-55a19.2	99	82.398	Anabas_testudineus
ENSXMAG00000003519	si:ch1073-55a19.2	95	50.596	ENSACAG00000002091	RANBP2	98	59.833	Anolis_carolinensis
ENSXMAG00000003519	si:ch1073-55a19.2	100	49.640	ENSANAG00000023124	RANBP2	100	49.937	Aotus_nancymaae
ENSXMAG00000003519	si:ch1073-55a19.2	100	74.775	ENSACLG00000020500	si:ch1073-55a19.2	99	82.952	Astatotilapia_calliptera
ENSXMAG00000003519	si:ch1073-55a19.2	100	53.591	ENSBTAG00000000152	RANBP2	100	53.523	Bos_taurus
ENSXMAG00000003519	si:ch1073-55a19.2	100	51.903	ENSCJAG00000001189	RANBP2	100	53.595	Callithrix_jacchus
ENSXMAG00000003519	si:ch1073-55a19.2	99	74.510	ENSCAFG00000023061	RANBP2	100	74.510	Canis_familiaris
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.730	ENSCAFG00020009314	RANBP2	100	54.730	Canis_lupus_dingo
ENSXMAG00000003519	si:ch1073-55a19.2	100	52.941	ENSCHIG00000012686	RANBP2	100	50.692	Capra_hircus
ENSXMAG00000003519	si:ch1073-55a19.2	99	54.982	ENSTSYG00000001656	RANBP2	98	67.617	Carlito_syrichta
ENSXMAG00000003519	si:ch1073-55a19.2	99	54.815	ENSCAPG00000010687	RANBP2	97	62.176	Cavia_aperea
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.884	ENSCPOG00000000392	RANBP2	100	50.016	Cavia_porcellus
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.248	ENSCCAG00000028166	RANBP2	100	54.248	Cebus_capucinus
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.602	ENSCATG00000032597	RANBP2	100	53.595	Cercocebus_atys
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.941	ENSCLAG00000010533	RANBP2	100	50.221	Chinchilla_lanigera
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.634	ENSCSAG00000017019	RANBP2	100	55.241	Chlorocebus_sabaeus
ENSXMAG00000003519	si:ch1073-55a19.2	63	64.000	ENSCHOG00000012659	-	58	64.000	Choloepus_hoffmanni
ENSXMAG00000003519	si:ch1073-55a19.2	100	55.882	ENSCPBG00000006985	RANBP2	100	54.563	Chrysemys_picta_bellii
ENSXMAG00000003519	si:ch1073-55a19.2	97	54.089	ENSCANG00000041469	RANBP2	99	55.067	Colobus_angolensis_palliatus
ENSXMAG00000003519	si:ch1073-55a19.2	100	55.307	ENSCGRG00001000642	Ranbp2	100	53.595	Cricetulus_griseus_chok1gshd
ENSXMAG00000003519	si:ch1073-55a19.2	100	55.307	ENSCGRG00000008995	Ranbp2	100	53.595	Cricetulus_griseus_crigri
ENSXMAG00000003519	si:ch1073-55a19.2	100	67.677	ENSCSEG00000013280	si:ch1073-55a19.2	98	76.812	Cynoglossus_semilaevis
ENSXMAG00000003519	si:ch1073-55a19.2	100	80.036	ENSCVAG00000016050	si:ch1073-55a19.2	98	87.563	Cyprinodon_variegatus
ENSXMAG00000003519	si:ch1073-55a19.2	100	58.159	ENSDARG00000093125	RANBP2	100	57.912	Danio_rerio
ENSXMAG00000003519	si:ch1073-55a19.2	99	48.678	ENSDNOG00000040501	RANBP2	99	48.641	Dasypus_novemcinctus
ENSXMAG00000003519	si:ch1073-55a19.2	100	51.490	ENSDORG00000002206	Ranbp2	100	50.807	Dipodomys_ordii
ENSXMAG00000003519	si:ch1073-55a19.2	74	56.872	ENSETEG00000008891	-	66	56.872	Echinops_telfairi
ENSXMAG00000003519	si:ch1073-55a19.2	100	53.994	ENSEBUG00000010057	si:ch1073-55a19.2	86	53.600	Eptatretus_burgeri
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.730	ENSEASG00005012918	RANBP2	100	54.730	Equus_asinus_asinus
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.730	ENSECAG00000008458	RANBP2	96	54.730	Equus_caballus
ENSXMAG00000003519	si:ch1073-55a19.2	80	64.486	ENSEEUG00000007806	RANBP2	78	64.486	Erinaceus_europaeus
ENSXMAG00000003519	si:ch1073-55a19.2	99	76.786	ENSELUG00000007763	si:ch1073-55a19.2	94	78.626	Esox_lucius
ENSXMAG00000003519	si:ch1073-55a19.2	99	50.162	ENSFALG00000003519	RANBP2	99	50.262	Ficedula_albicollis
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.048	ENSFDAG00000016912	RANBP2	61	50.607	Fukomys_damarensis
ENSXMAG00000003519	si:ch1073-55a19.2	100	78.052	ENSFHEG00000009774	si:ch1073-55a19.2	98	88.205	Fundulus_heteroclitus
ENSXMAG00000003519	si:ch1073-55a19.2	99	73.759	ENSGMOG00000007071	si:ch1073-55a19.2	94	75.177	Gadus_morhua
ENSXMAG00000003519	si:ch1073-55a19.2	100	90.867	ENSGAFG00000010966	si:ch1073-55a19.2	100	90.983	Gambusia_affinis
ENSXMAG00000003519	si:ch1073-55a19.2	100	69.938	ENSGACG00000006831	si:ch1073-55a19.2	100	68.333	Gasterosteus_aculeatus
ENSXMAG00000003519	si:ch1073-55a19.2	94	54.167	ENSGAGG00000025039	RANBP2	99	54.167	Gopherus_agassizii
ENSXMAG00000003519	si:ch1073-55a19.2	100	74.815	ENSHBUG00000000053	si:ch1073-55a19.2	99	83.206	Haplochromis_burtoni
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.543	ENSHGLG00000018887	RANBP2	100	49.810	Heterocephalus_glaber_female
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.400	ENSHGLG00100007365	RANBP2	61	51.462	Heterocephalus_glaber_male
ENSXMAG00000003519	si:ch1073-55a19.2	100	67.197	ENSHCOG00000019596	si:ch1073-55a19.2	98	77.436	Hippocampus_comes
ENSXMAG00000003519	si:ch1073-55a19.2	100	56.878	ENSIPUG00000019614	si:ch1073-55a19.2	99	58.302	Ictalurus_punctatus
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.271	ENSSTOG00000019518	RANBP2	92	67.358	Ictidomys_tridecemlineatus
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.135	ENSJJAG00000021292	Ranbp2	100	50.288	Jaculus_jaculus
ENSXMAG00000003519	si:ch1073-55a19.2	100	77.151	ENSKMAG00000001158	si:ch1073-55a19.2	97	81.701	Kryptolebias_marmoratus
ENSXMAG00000003519	si:ch1073-55a19.2	95	72.720	ENSLBEG00000027979	si:ch1073-55a19.2	97	77.315	Labrus_bergylta
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.902	ENSLACG00000009728	RANBP2	100	54.902	Latimeria_chalumnae
ENSXMAG00000003519	si:ch1073-55a19.2	100	60.601	ENSLOCG00000010333	si:ch1073-55a19.2	96	69.767	Lepisosteus_oculatus
ENSXMAG00000003519	si:ch1073-55a19.2	100	53.846	ENSLAFG00000000740	RANBP2	100	54.981	Loxodonta_africana
ENSXMAG00000003519	si:ch1073-55a19.2	100	52.629	ENSMFAG00000029029	RANBP2	100	53.595	Macaca_fascicularis
ENSXMAG00000003519	si:ch1073-55a19.2	100	52.629	ENSMMUG00000021019	RANBP2	100	53.595	Macaca_mulatta
ENSXMAG00000003519	si:ch1073-55a19.2	100	52.571	ENSMNEG00000043706	RANBP2	100	53.595	Macaca_nemestrina
ENSXMAG00000003519	si:ch1073-55a19.2	99	52.592	ENSMLEG00000037350	RANBP2	100	53.595	Mandrillus_leucophaeus
ENSXMAG00000003519	si:ch1073-55a19.2	100	73.674	ENSMAMG00000017900	si:ch1073-55a19.2	99	81.679	Mastacembelus_armatus
ENSXMAG00000003519	si:ch1073-55a19.2	100	74.775	ENSMZEG00005010956	si:ch1073-55a19.2	99	82.952	Maylandia_zebra
ENSXMAG00000003519	si:ch1073-55a19.2	98	64.416	ENSMGAG00000014831	-	97	64.416	Meleagris_gallopavo
ENSXMAG00000003519	si:ch1073-55a19.2	100	51.068	ENSMAUG00000013313	Ranbp2	100	50.555	Mesocricetus_auratus
ENSXMAG00000003519	si:ch1073-55a19.2	100	56.111	ENSMICG00000011864	RANBP2	100	55.787	Microcebus_murinus
ENSXMAG00000003519	si:ch1073-55a19.2	100	55.224	ENSMOCG00000012516	Ranbp2	98	67.013	Microtus_ochrogaster
ENSXMAG00000003519	si:ch1073-55a19.2	100	73.591	ENSMMOG00000005743	si:ch1073-55a19.2	100	73.520	Mola_mola
ENSXMAG00000003519	si:ch1073-55a19.2	97	59.326	ENSMODG00000002914	RANBP2	99	60.899	Monodelphis_domestica
ENSXMAG00000003519	si:ch1073-55a19.2	100	73.655	ENSMALG00000004359	si:ch1073-55a19.2	99	82.443	Monopterus_albus
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.526	MGP_PahariEiJ_G0030751	Ranbp2	100	49.810	Mus_pahari
ENSXMAG00000003519	si:ch1073-55a19.2	100	53.789	MGP_SPRETEiJ_G0016147	Ranbp2	61	65.974	Mus_spretus
ENSXMAG00000003519	si:ch1073-55a19.2	100	63.830	ENSMPUG00000010754	RANBP2	100	49.072	Mustela_putorius_furo
ENSXMAG00000003519	si:ch1073-55a19.2	99	54.730	ENSMLUG00000005555	RANBP2	92	66.495	Myotis_lucifugus
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.762	ENSNGAG00000016154	Ranbp2	100	50.571	Nannospalax_galili
ENSXMAG00000003519	si:ch1073-55a19.2	100	74.775	ENSNBRG00000004587	si:ch1073-55a19.2	100	74.730	Neolamprologus_brichardi
ENSXMAG00000003519	si:ch1073-55a19.2	99	52.037	ENSNLEG00000007501	RANBP2	99	53.595	Nomascus_leucogenys
ENSXMAG00000003519	si:ch1073-55a19.2	91	50.562	ENSOPRG00000009720	-	94	54.930	Ochotona_princeps
ENSXMAG00000003519	si:ch1073-55a19.2	100	51.012	ENSODEG00000013212	RANBP2	100	49.889	Octodon_degus
ENSXMAG00000003519	si:ch1073-55a19.2	100	73.029	ENSONIG00000004346	si:ch1073-55a19.2	100	72.932	Oreochromis_niloticus
ENSXMAG00000003519	si:ch1073-55a19.2	78	50.079	ENSOANG00000004894	RANBP2	100	50.297	Ornithorhynchus_anatinus
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.000	ENSOCUG00000001165	RANBP2	100	49.716	Oryctolagus_cuniculus
ENSXMAG00000003519	si:ch1073-55a19.2	100	68.210	ENSORLG00000015523	si:ch1073-55a19.2	99	82.097	Oryzias_latipes
ENSXMAG00000003519	si:ch1073-55a19.2	100	71.662	ENSORLG00020003797	si:ch1073-55a19.2	99	81.841	Oryzias_latipes_hni
ENSXMAG00000003519	si:ch1073-55a19.2	100	71.597	ENSORLG00015004994	si:ch1073-55a19.2	99	82.097	Oryzias_latipes_hsok
ENSXMAG00000003519	si:ch1073-55a19.2	100	71.373	ENSOMEG00000022969	si:ch1073-55a19.2	98	77.938	Oryzias_melastigma
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.851	ENSOGAG00000028976	RANBP2	98	67.959	Otolemur_garnettii
ENSXMAG00000003519	si:ch1073-55a19.2	99	50.581	ENSOARG00000000558	RANBP2	99	50.502	Ovis_aries
ENSXMAG00000003519	si:ch1073-55a19.2	100	50.602	ENSPANG00000000990	RANBP2	100	53.595	Papio_anubis
ENSXMAG00000003519	si:ch1073-55a19.2	96	49.372	ENSPKIG00000021054	-	99	51.299	Paramormyrops_kingsleyae
ENSXMAG00000003519	si:ch1073-55a19.2	100	61.340	ENSPKIG00000010971	RANBP2	100	61.800	Paramormyrops_kingsleyae
ENSXMAG00000003519	si:ch1073-55a19.2	99	53.333	ENSPSIG00000007182	RANBP2	97	64.416	Pelodiscus_sinensis
ENSXMAG00000003519	si:ch1073-55a19.2	93	51.377	ENSPEMG00000021565	Ranbp2	99	50.767	Peromyscus_maniculatus_bairdii
ENSXMAG00000003519	si:ch1073-55a19.2	87	48.507	ENSPMAG00000007195	si:ch1073-55a19.2	100	59.124	Petromyzon_marinus
ENSXMAG00000003519	si:ch1073-55a19.2	100	51.275	ENSPCIG00000013912	RANBP2	100	53.577	Phascolarctos_cinereus
ENSXMAG00000003519	si:ch1073-55a19.2	100	87.882	ENSPFOG00000007377	si:ch1073-55a19.2	99	95.619	Poecilia_formosa
ENSXMAG00000003519	si:ch1073-55a19.2	100	88.649	ENSPLAG00000012373	si:ch1073-55a19.2	98	94.845	Poecilia_latipinna
ENSXMAG00000003519	si:ch1073-55a19.2	100	88.593	ENSPMEG00000005561	si:ch1073-55a19.2	99	95.619	Poecilia_mexicana
ENSXMAG00000003519	si:ch1073-55a19.2	100	87.236	ENSPREG00000013331	si:ch1073-55a19.2	100	88.635	Poecilia_reticulata
ENSXMAG00000003519	si:ch1073-55a19.2	70	52.337	ENSPPYG00000012139	-	100	53.672	Pongo_abelii
ENSXMAG00000003519	si:ch1073-55a19.2	56	58.216	ENSPPYG00000029793	-	99	58.059	Pongo_abelii
ENSXMAG00000003519	si:ch1073-55a19.2	97	65.823	ENSPCAG00000000957	RANBP2	97	66.139	Procavia_capensis
ENSXMAG00000003519	si:ch1073-55a19.2	100	56.296	ENSPCOG00000008879	RANBP2	100	55.939	Propithecus_coquereli
ENSXMAG00000003519	si:ch1073-55a19.2	99	54.960	ENSPVAG00000003883	RANBP2	93	58.182	Pteropus_vampyrus
ENSXMAG00000003519	si:ch1073-55a19.2	100	74.736	ENSPNYG00000015971	si:ch1073-55a19.2	99	83.206	Pundamilia_nyererei
ENSXMAG00000003519	si:ch1073-55a19.2	100	61.597	ENSPNAG00000026129	si:ch1073-55a19.2	100	61.908	Pygocentrus_nattereri
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.135	ENSRNOG00000000796	Ranbp2	98	64.416	Rattus_norvegicus
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.004	ENSRBIG00000043515	RANBP2	100	54.771	Rhinopithecus_bieti
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.004	ENSRROG00000026113	RANBP2	100	54.771	Rhinopithecus_roxellana
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.479	ENSSBOG00000035336	RANBP2	100	54.340	Saimiri_boliviensis_boliviensis
ENSXMAG00000003519	si:ch1073-55a19.2	99	51.124	ENSSHAG00000004676	RANBP2	99	51.351	Sarcophilus_harrisii
ENSXMAG00000003519	si:ch1073-55a19.2	100	57.407	ENSSFOG00015023201	RANBP2	96	65.972	Scleropages_formosus
ENSXMAG00000003519	si:ch1073-55a19.2	99	62.239	ENSSFOG00015003943	-	99	62.163	Scleropages_formosus
ENSXMAG00000003519	si:ch1073-55a19.2	100	74.447	ENSSMAG00000007331	si:ch1073-55a19.2	100	72.280	Scophthalmus_maximus
ENSXMAG00000003519	si:ch1073-55a19.2	100	76.020	ENSSDUG00000013160	si:ch1073-55a19.2	98	84.143	Seriola_dumerili
ENSXMAG00000003519	si:ch1073-55a19.2	100	76.247	ENSSLDG00000023392	si:ch1073-55a19.2	100	76.340	Seriola_lalandi_dorsalis
ENSXMAG00000003519	si:ch1073-55a19.2	94	56.884	ENSSARG00000005595	RANBP2	69	66.667	Sorex_araneus
ENSXMAG00000003519	si:ch1073-55a19.2	100	76.434	ENSSPAG00000008000	si:ch1073-55a19.2	97	83.247	Stegastes_partitus
ENSXMAG00000003519	si:ch1073-55a19.2	100	55.405	ENSSSCG00000008136	RANBP2	98	55.405	Sus_scrofa
ENSXMAG00000003519	si:ch1073-55a19.2	98	53.266	ENSTGUG00000009571	RANBP2	100	53.024	Taeniopygia_guttata
ENSXMAG00000003519	si:ch1073-55a19.2	94	54.494	ENSTTRG00000007400	RANBP2	95	66.580	Tursiops_truncatus
ENSXMAG00000003519	si:ch1073-55a19.2	93	56.296	ENSUAMG00000020025	RANBP2	99	55.634	Ursus_americanus
ENSXMAG00000003519	si:ch1073-55a19.2	97	66.142	ENSVPAG00000006676	RANBP2	91	66.142	Vicugna_pacos
ENSXMAG00000003519	si:ch1073-55a19.2	100	54.730	ENSVVUG00000014899	RANBP2	100	54.789	Vulpes_vulpes
ENSXMAG00000003519	si:ch1073-55a19.2	94	51.127	ENSXETG00000016006	ranbp2	99	50.494	Xenopus_tropicalis
ENSXMAG00000003519	si:ch1073-55a19.2	99	96.363	ENSXCOG00000000752	si:ch1073-55a19.2	99	96.363	Xiphophorus_couchianus