EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003538 (Gene tree)
Gene ID: 102228914
Gene Symbol: rbm18
Alias: zgc:73332
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 14154 bases
Position: chr8:12280198-12294351
Accession: 102228914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000036748	RRM_1	PF00076.22	2.2e-15	1	1
ENSXMAP00000003549	RRM_1	PF00076.22	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000038599	-	2434	XM_023337665	ENSXMAP00000036748	199 (aa)	XP_023193433	UPI0004444E1F
ENSXMAT00000003554	-	2373	XM_005810025	ENSXMAP00000003549	201 (aa)	XP_005810082	M3ZMV6

Gene Model

Click here to download ENSXMAG00000003538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003538	rbm18	90	69.444	ENSG00000119446	RBM18	92	69.444	Homo_sapiens
ENSXMAG00000003538	rbm18	100	93.035	ENSAPOG00000001987	rbm18	100	93.035	Acanthochromis_polyacanthus
ENSXMAG00000003538	rbm18	90	68.889	ENSAMEG00000000772	RBM18	92	68.889	Ailuropoda_melanoleuca
ENSXMAG00000003538	rbm18	93	85.787	ENSACIG00000005001	rbm18	99	87.310	Amphilophus_citrinellus
ENSXMAG00000003538	rbm18	100	93.467	ENSAOCG00000006762	rbm18	100	93.467	Amphiprion_ocellaris
ENSXMAG00000003538	rbm18	100	93.467	ENSAPEG00000007972	rbm18	100	93.467	Amphiprion_percula
ENSXMAG00000003538	rbm18	100	90.955	ENSATEG00000019164	rbm18	100	90.955	Anabas_testudineus
ENSXMAG00000003538	rbm18	90	69.444	ENSANAG00000035441	RBM18	92	69.444	Aotus_nancymaae
ENSXMAG00000003538	rbm18	100	95.522	ENSACLG00000019848	rbm18	100	95.522	Astatotilapia_calliptera
ENSXMAG00000003538	rbm18	100	75.622	ENSAMXG00000035574	rbm18	100	75.622	Astyanax_mexicanus
ENSXMAG00000003538	rbm18	90	67.778	ENSBTAG00000016367	RBM18	92	67.778	Bos_taurus
ENSXMAG00000003538	rbm18	90	69.444	ENSCJAG00000046355	RBM18	92	69.444	Callithrix_jacchus
ENSXMAG00000003538	rbm18	90	68.889	ENSCAFG00000030041	RBM18	92	68.889	Canis_familiaris
ENSXMAG00000003538	rbm18	90	68.889	ENSCAFG00020015174	RBM18	92	68.889	Canis_lupus_dingo
ENSXMAG00000003538	rbm18	90	67.778	ENSCHIG00000026444	RBM18	92	67.778	Capra_hircus
ENSXMAG00000003538	rbm18	90	69.444	ENSTSYG00000030353	RBM18	92	69.444	Carlito_syrichta
ENSXMAG00000003538	rbm18	90	68.889	ENSCPOG00000038004	RBM18	92	68.889	Cavia_porcellus
ENSXMAG00000003538	rbm18	90	69.444	ENSCCAG00000035467	RBM18	92	69.444	Cebus_capucinus
ENSXMAG00000003538	rbm18	90	69.444	ENSCATG00000035634	RBM18	92	69.444	Cercocebus_atys
ENSXMAG00000003538	rbm18	90	69.444	ENSCLAG00000010773	RBM18	92	69.444	Chinchilla_lanigera
ENSXMAG00000003538	rbm18	60	76.667	ENSCSAG00000013373	RBM18	82	76.667	Chlorocebus_sabaeus
ENSXMAG00000003538	rbm18	75	69.536	ENSCHOG00000001341	RBM18	96	69.536	Choloepus_hoffmanni
ENSXMAG00000003538	rbm18	90	71.111	ENSCPBG00000009885	RBM18	91	71.111	Chrysemys_picta_bellii
ENSXMAG00000003538	rbm18	81	37.725	ENSCING00000010157	-	88	39.779	Ciona_intestinalis
ENSXMAG00000003538	rbm18	54	39.252	ENSCSAVG00000000409	-	80	39.252	Ciona_savignyi
ENSXMAG00000003538	rbm18	90	70.000	ENSCANG00000029590	RBM18	92	70.000	Colobus_angolensis_palliatus
ENSXMAG00000003538	rbm18	90	69.444	ENSCGRG00001014593	Rbm18	92	69.444	Cricetulus_griseus_chok1gshd
ENSXMAG00000003538	rbm18	82	71.515	ENSCGRG00000012247	Rbm18	90	71.515	Cricetulus_griseus_crigri
ENSXMAG00000003538	rbm18	100	89.447	ENSCSEG00000017587	rbm18	100	89.447	Cynoglossus_semilaevis
ENSXMAG00000003538	rbm18	100	98.492	ENSCVAG00000012436	rbm18	87	98.492	Cyprinodon_variegatus
ENSXMAG00000003538	rbm18	100	78.109	ENSDARG00000044255	rbm18	100	78.109	Danio_rerio
ENSXMAG00000003538	rbm18	90	68.889	ENSDNOG00000031658	RBM18	92	68.889	Dasypus_novemcinctus
ENSXMAG00000003538	rbm18	90	69.444	ENSDORG00000028540	Rbm18	92	69.444	Dipodomys_ordii
ENSXMAG00000003538	rbm18	87	36.126	FBgn0030571	CG14414	99	33.962	Drosophila_melanogaster
ENSXMAG00000003538	rbm18	90	59.444	ENSETEG00000009832	RBM18	92	59.551	Echinops_telfairi
ENSXMAG00000003538	rbm18	84	55.294	ENSEBUG00000009127	rbm18	86	55.294	Eptatretus_burgeri
ENSXMAG00000003538	rbm18	90	68.889	ENSEASG00005021084	RBM18	92	68.889	Equus_asinus_asinus
ENSXMAG00000003538	rbm18	90	68.889	ENSECAG00000024639	RBM18	92	68.889	Equus_caballus
ENSXMAG00000003538	rbm18	90	53.333	ENSEEUG00000002828	RBM18	92	53.333	Erinaceus_europaeus
ENSXMAG00000003538	rbm18	99	78.788	ENSELUG00000005876	rbm18	96	78.125	Esox_lucius
ENSXMAG00000003538	rbm18	90	68.889	ENSFCAG00000037774	RBM18	92	68.889	Felis_catus
ENSXMAG00000003538	rbm18	75	70.861	ENSFALG00000001940	RBM18	92	70.861	Ficedula_albicollis
ENSXMAG00000003538	rbm18	90	68.889	ENSFDAG00000012679	RBM18	92	68.889	Fukomys_damarensis
ENSXMAG00000003538	rbm18	99	97.990	ENSFHEG00000012457	rbm18	99	97.990	Fundulus_heteroclitus
ENSXMAG00000003538	rbm18	100	78.713	ENSGMOG00000019735	rbm18	100	78.713	Gadus_morhua
ENSXMAG00000003538	rbm18	91	70.492	ENSGALG00000028167	RBM18	94	70.492	Gallus_gallus
ENSXMAG00000003538	rbm18	100	100.000	ENSGAFG00000007767	rbm18	100	100.000	Gambusia_affinis
ENSXMAG00000003538	rbm18	100	87.065	ENSGACG00000017348	rbm18	99	87.065	Gasterosteus_aculeatus
ENSXMAG00000003538	rbm18	90	70.556	ENSGAGG00000018318	RBM18	91	70.556	Gopherus_agassizii
ENSXMAG00000003538	rbm18	90	69.444	ENSGGOG00000011052	RBM18	92	69.444	Gorilla_gorilla
ENSXMAG00000003538	rbm18	100	95.522	ENSHBUG00000015237	rbm18	100	95.522	Haplochromis_burtoni
ENSXMAG00000003538	rbm18	90	68.889	ENSHGLG00000011073	RBM18	92	68.889	Heterocephalus_glaber_female
ENSXMAG00000003538	rbm18	90	68.889	ENSHGLG00100005536	RBM18	92	68.889	Heterocephalus_glaber_male
ENSXMAG00000003538	rbm18	90	56.111	ENSHGLG00100006247	-	91	56.111	Heterocephalus_glaber_male
ENSXMAG00000003538	rbm18	100	87.562	ENSHCOG00000003148	rbm18	100	87.562	Hippocampus_comes
ENSXMAG00000003538	rbm18	100	72.139	ENSIPUG00000021512	rbm18	83	72.139	Ictalurus_punctatus
ENSXMAG00000003538	rbm18	86	64.943	ENSSTOG00000032266	-	91	64.943	Ictidomys_tridecemlineatus
ENSXMAG00000003538	rbm18	90	69.444	ENSSTOG00000022388	-	92	69.444	Ictidomys_tridecemlineatus
ENSXMAG00000003538	rbm18	90	66.667	ENSJJAG00000010974	-	92	66.667	Jaculus_jaculus
ENSXMAG00000003538	rbm18	60	76.667	ENSJJAG00000009581	-	75	76.667	Jaculus_jaculus
ENSXMAG00000003538	rbm18	100	95.025	ENSKMAG00000010679	rbm18	86	95.025	Kryptolebias_marmoratus
ENSXMAG00000003538	rbm18	100	91.045	ENSLBEG00000023896	rbm18	100	91.045	Labrus_bergylta
ENSXMAG00000003538	rbm18	67	73.723	ENSLACG00000009920	RBM18	99	73.723	Latimeria_chalumnae
ENSXMAG00000003538	rbm18	90	68.889	ENSLAFG00000012134	RBM18	92	68.889	Loxodonta_africana
ENSXMAG00000003538	rbm18	90	69.444	ENSMFAG00000000443	RBM18	92	69.444	Macaca_fascicularis
ENSXMAG00000003538	rbm18	90	69.444	ENSMMUG00000011455	RBM18	92	69.444	Macaca_mulatta
ENSXMAG00000003538	rbm18	90	69.444	ENSMNEG00000035374	RBM18	92	69.444	Macaca_nemestrina
ENSXMAG00000003538	rbm18	90	69.444	ENSMLEG00000043105	RBM18	92	69.444	Mandrillus_leucophaeus
ENSXMAG00000003538	rbm18	100	91.457	ENSMAMG00000009239	rbm18	100	91.457	Mastacembelus_armatus
ENSXMAG00000003538	rbm18	100	95.477	ENSMZEG00005017921	rbm18	100	95.477	Maylandia_zebra
ENSXMAG00000003538	rbm18	88	64.407	ENSMGAG00000016888	RBM18	97	64.407	Meleagris_gallopavo
ENSXMAG00000003538	rbm18	90	68.889	ENSMAUG00000021365	Rbm18	92	68.889	Mesocricetus_auratus
ENSXMAG00000003538	rbm18	90	70.000	ENSMICG00000046793	RBM18	92	70.000	Microcebus_murinus
ENSXMAG00000003538	rbm18	90	68.889	ENSMOCG00000000613	Rbm18	92	68.889	Microtus_ochrogaster
ENSXMAG00000003538	rbm18	100	78.431	ENSMMOG00000021319	rbm18	100	78.431	Mola_mola
ENSXMAG00000003538	rbm18	75	70.861	ENSMODG00000019688	RBM18	96	70.861	Monodelphis_domestica
ENSXMAG00000003538	rbm18	100	92.040	ENSMALG00000017766	rbm18	100	92.040	Monopterus_albus
ENSXMAG00000003538	rbm18	90	68.889	MGP_CAROLIEiJ_G0023488	Rbm18	92	68.889	Mus_caroli
ENSXMAG00000003538	rbm18	90	68.889	ENSMUSG00000026889	Rbm18	92	68.889	Mus_musculus
ENSXMAG00000003538	rbm18	90	68.333	MGP_PahariEiJ_G0024945	Rbm18	92	68.333	Mus_pahari
ENSXMAG00000003538	rbm18	90	68.889	MGP_SPRETEiJ_G0024405	Rbm18	92	68.889	Mus_spretus
ENSXMAG00000003538	rbm18	90	68.889	ENSMPUG00000007246	RBM18	92	68.889	Mustela_putorius_furo
ENSXMAG00000003538	rbm18	90	68.889	ENSMLUG00000013224	-	92	68.889	Myotis_lucifugus
ENSXMAG00000003538	rbm18	90	68.889	ENSMLUG00000004794	-	92	68.889	Myotis_lucifugus
ENSXMAG00000003538	rbm18	90	69.444	ENSNGAG00000000041	Rbm18	92	69.444	Nannospalax_galili
ENSXMAG00000003538	rbm18	100	95.522	ENSNBRG00000021128	rbm18	100	95.522	Neolamprologus_brichardi
ENSXMAG00000003538	rbm18	90	69.444	ENSNLEG00000017174	RBM18	92	69.444	Nomascus_leucogenys
ENSXMAG00000003538	rbm18	90	55.556	ENSMEUG00000015704	RBM18	93	55.556	Notamacropus_eugenii
ENSXMAG00000003538	rbm18	90	68.889	ENSOPRG00000010381	RBM18	92	68.889	Ochotona_princeps
ENSXMAG00000003538	rbm18	90	68.889	ENSODEG00000002055	RBM18	92	68.889	Octodon_degus
ENSXMAG00000003538	rbm18	100	95.477	ENSONIG00000003723	rbm18	100	95.477	Oreochromis_niloticus
ENSXMAG00000003538	rbm18	90	68.889	ENSOANG00000008200	RBM18	92	68.889	Ornithorhynchus_anatinus
ENSXMAG00000003538	rbm18	90	68.889	ENSOCUG00000008527	RBM18	92	68.889	Oryctolagus_cuniculus
ENSXMAG00000003538	rbm18	100	89.109	ENSORLG00000009962	rbm18	100	89.109	Oryzias_latipes
ENSXMAG00000003538	rbm18	100	89.109	ENSORLG00020013452	rbm18	100	89.109	Oryzias_latipes_hni
ENSXMAG00000003538	rbm18	100	89.109	ENSORLG00015001711	rbm18	97	85.052	Oryzias_latipes_hsok
ENSXMAG00000003538	rbm18	100	89.604	ENSOMEG00000001492	rbm18	100	89.604	Oryzias_melastigma
ENSXMAG00000003538	rbm18	90	69.444	ENSOGAG00000015104	RBM18	92	69.444	Otolemur_garnettii
ENSXMAG00000003538	rbm18	90	67.778	ENSOARG00000014228	RBM18	92	67.778	Ovis_aries
ENSXMAG00000003538	rbm18	90	69.444	ENSPPAG00000023355	RBM18	92	69.444	Pan_paniscus
ENSXMAG00000003538	rbm18	90	68.889	ENSPPRG00000011360	RBM18	92	68.889	Panthera_pardus
ENSXMAG00000003538	rbm18	90	68.889	ENSPTIG00000007126	RBM18	92	68.889	Panthera_tigris_altaica
ENSXMAG00000003538	rbm18	90	69.444	ENSPTRG00000021323	RBM18	92	69.444	Pan_troglodytes
ENSXMAG00000003538	rbm18	90	69.444	ENSPANG00000025845	RBM18	92	69.444	Papio_anubis
ENSXMAG00000003538	rbm18	63	84.127	ENSPKIG00000005430	rbm18	72	84.127	Paramormyrops_kingsleyae
ENSXMAG00000003538	rbm18	90	71.667	ENSPSIG00000013631	RBM18	92	71.667	Pelodiscus_sinensis
ENSXMAG00000003538	rbm18	98	83.163	ENSPMGG00000023951	rbm18	96	83.163	Periophthalmus_magnuspinnatus
ENSXMAG00000003538	rbm18	80	61.728	ENSPMAG00000000630	rbm18	94	61.728	Petromyzon_marinus
ENSXMAG00000003538	rbm18	90	70.556	ENSPCIG00000025526	RBM18	92	70.556	Phascolarctos_cinereus
ENSXMAG00000003538	rbm18	100	100.000	ENSPFOG00000019706	rbm18	100	100.000	Poecilia_formosa
ENSXMAG00000003538	rbm18	100	100.000	ENSPLAG00000005571	rbm18	100	100.000	Poecilia_latipinna
ENSXMAG00000003538	rbm18	100	100.000	ENSPMEG00000013977	rbm18	100	100.000	Poecilia_mexicana
ENSXMAG00000003538	rbm18	100	100.000	ENSPREG00000009157	rbm18	100	100.000	Poecilia_reticulata
ENSXMAG00000003538	rbm18	90	69.444	ENSPPYG00000019569	RBM18	92	69.444	Pongo_abelii
ENSXMAG00000003538	rbm18	60	76.667	ENSPCAG00000011245	RBM18	88	76.667	Procavia_capensis
ENSXMAG00000003538	rbm18	90	69.444	ENSPCOG00000024474	RBM18	92	69.444	Propithecus_coquereli
ENSXMAG00000003538	rbm18	90	68.889	ENSPVAG00000000863	RBM18	92	68.889	Pteropus_vampyrus
ENSXMAG00000003538	rbm18	100	95.522	ENSPNYG00000012421	rbm18	100	95.522	Pundamilia_nyererei
ENSXMAG00000003538	rbm18	100	76.119	ENSPNAG00000017660	rbm18	100	76.119	Pygocentrus_nattereri
ENSXMAG00000003538	rbm18	90	69.444	ENSRNOG00000006763	Rbm18	92	69.444	Rattus_norvegicus
ENSXMAG00000003538	rbm18	90	70.000	ENSRBIG00000040177	RBM18	92	70.000	Rhinopithecus_bieti
ENSXMAG00000003538	rbm18	90	70.000	ENSRROG00000031364	RBM18	92	70.000	Rhinopithecus_roxellana
ENSXMAG00000003538	rbm18	90	69.444	ENSSBOG00000024806	RBM18	92	69.444	Saimiri_boliviensis_boliviensis
ENSXMAG00000003538	rbm18	90	70.556	ENSSHAG00000012257	RBM18	92	70.556	Sarcophilus_harrisii
ENSXMAG00000003538	rbm18	100	75.124	ENSSFOG00015001100	rbm18	100	75.124	Scleropages_formosus
ENSXMAG00000003538	rbm18	100	88.557	ENSSMAG00000020138	rbm18	100	88.557	Scophthalmus_maximus
ENSXMAG00000003538	rbm18	100	92.462	ENSSDUG00000016203	rbm18	98	92.462	Seriola_dumerili
ENSXMAG00000003538	rbm18	100	92.462	ENSSLDG00000016329	rbm18	100	92.462	Seriola_lalandi_dorsalis
ENSXMAG00000003538	rbm18	75	70.199	ENSSPUG00000001601	RBM18	84	70.199	Sphenodon_punctatus
ENSXMAG00000003538	rbm18	100	93.467	ENSSPAG00000005394	rbm18	100	93.467	Stegastes_partitus
ENSXMAG00000003538	rbm18	90	67.778	ENSSSCG00000030089	RBM18	93	66.879	Sus_scrofa
ENSXMAG00000003538	rbm18	75	70.199	ENSTGUG00000006802	RBM18	95	70.199	Taeniopygia_guttata
ENSXMAG00000003538	rbm18	100	85.427	ENSTRUG00000005812	rbm18	100	85.427	Takifugu_rubripes
ENSXMAG00000003538	rbm18	96	86.528	ENSTNIG00000009141	rbm18	99	86.528	Tetraodon_nigroviridis
ENSXMAG00000003538	rbm18	75	70.199	ENSTBEG00000016520	RBM18	96	70.199	Tupaia_belangeri
ENSXMAG00000003538	rbm18	90	68.889	ENSUAMG00000014431	RBM18	92	68.889	Ursus_americanus
ENSXMAG00000003538	rbm18	90	68.889	ENSUMAG00000003445	RBM18	92	68.889	Ursus_maritimus
ENSXMAG00000003538	rbm18	90	68.889	ENSVPAG00000008618	RBM18	92	68.889	Vicugna_pacos
ENSXMAG00000003538	rbm18	90	68.889	ENSVVUG00000009442	RBM18	92	68.889	Vulpes_vulpes
ENSXMAG00000003538	rbm18	90	65.000	ENSXETG00000016328	rbm18	92	65.000	Xenopus_tropicalis