EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003632 (Gene tree)
Gene ID: 102235894
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 19687 bases
Position: chr15:11428420-11448106
Accession: 102235894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003639	PARP	PF00644.20	1e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000003644	-	4089	XM_023347914	ENSXMAP00000003639	1015 (aa)	XP_023203682	M3ZN46

Gene Model

Click here to download ENSXMAG00000003632's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03410	Base excision repair	KEGG
xma04210	Apoptosis	KEGG
xma04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003632's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003632	parp1	99	69.783	ENSG00000143799	PARP1	99	69.783	Homo_sapiens
ENSXMAG00000003632	parp1	100	89.655	ENSAPOG00000006414	parp1	100	89.655	Acanthochromis_polyacanthus
ENSXMAG00000003632	parp1	96	68.826	ENSAMEG00000014451	PARP1	100	68.826	Ailuropoda_melanoleuca
ENSXMAG00000003632	parp1	100	89.655	ENSACIG00000005651	parp1	100	89.655	Amphilophus_citrinellus
ENSXMAG00000003632	parp1	100	91.034	ENSAOCG00000021005	parp1	100	91.034	Amphiprion_ocellaris
ENSXMAG00000003632	parp1	100	91.034	ENSAPEG00000004784	parp1	100	91.034	Amphiprion_percula
ENSXMAG00000003632	parp1	100	89.458	ENSATEG00000010457	parp1	100	89.458	Anabas_testudineus
ENSXMAG00000003632	parp1	87	72.593	ENSAPLG00000014039	PARP1	99	71.914	Anas_platyrhynchos
ENSXMAG00000003632	parp1	99	71.823	ENSACAG00000006189	PARP1	99	72.118	Anolis_carolinensis
ENSXMAG00000003632	parp1	99	70.079	ENSANAG00000032699	PARP1	99	70.472	Aotus_nancymaae
ENSXMAG00000003632	parp1	100	89.261	ENSACLG00000015489	parp1	100	89.261	Astatotilapia_calliptera
ENSXMAG00000003632	parp1	100	81.525	ENSAMXG00000006465	parp1	100	81.409	Astyanax_mexicanus
ENSXMAG00000003632	parp1	99	67.650	ENSBTAG00000000837	PARP1	99	68.043	Bos_taurus
ENSXMAG00000003632	parp1	87	43.555	WBGene00004049	parp-1	100	46.360	Caenorhabditis_elegans
ENSXMAG00000003632	parp1	99	69.291	ENSCJAG00000012831	PARP1	99	69.685	Callithrix_jacchus
ENSXMAG00000003632	parp1	96	68.744	ENSCAFG00000016089	PARP1	100	68.948	Canis_familiaris
ENSXMAG00000003632	parp1	99	69.390	ENSCAFG00020001660	PARP1	99	69.587	Canis_lupus_dingo
ENSXMAG00000003632	parp1	99	68.209	ENSCHIG00000018072	PARP1	99	68.535	Capra_hircus
ENSXMAG00000003632	parp1	90	70.531	ENSTSYG00000003699	PARP1	100	70.531	Carlito_syrichta
ENSXMAG00000003632	parp1	99	57.751	ENSCAPG00000011113	-	99	57.751	Cavia_aperea
ENSXMAG00000003632	parp1	99	69.261	ENSCPOG00000015643	-	99	69.261	Cavia_porcellus
ENSXMAG00000003632	parp1	99	70.177	ENSCCAG00000033484	PARP1	99	70.177	Cebus_capucinus
ENSXMAG00000003632	parp1	99	69.587	ENSCATG00000038981	PARP1	99	69.587	Cercocebus_atys
ENSXMAG00000003632	parp1	99	69.064	ENSCLAG00000006637	PARP1	99	69.064	Chinchilla_lanigera
ENSXMAG00000003632	parp1	66	78.125	ENSCHOG00000003539	PARP1	59	78.125	Choloepus_hoffmanni
ENSXMAG00000003632	parp1	99	73.228	ENSCPBG00000011958	PARP1	99	73.228	Chrysemys_picta_bellii
ENSXMAG00000003632	parp1	98	68.168	ENSCANG00000041340	PARP1	100	69.011	Colobus_angolensis_palliatus
ENSXMAG00000003632	parp1	99	69.064	ENSCGRG00001020559	Parp1	99	69.557	Cricetulus_griseus_chok1gshd
ENSXMAG00000003632	parp1	99	68.571	ENSCGRG00000004864	Parp1	100	69.082	Cricetulus_griseus_crigri
ENSXMAG00000003632	parp1	100	88.439	ENSCSEG00000020665	parp1	100	90.964	Cynoglossus_semilaevis
ENSXMAG00000003632	parp1	99	93.047	ENSCVAG00000021372	parp1	99	93.047	Cyprinodon_variegatus
ENSXMAG00000003632	parp1	100	82.301	ENSDARG00000019529	parp1	100	82.694	Danio_rerio
ENSXMAG00000003632	parp1	99	67.894	ENSDNOG00000012059	PARP1	100	68.712	Dasypus_novemcinctus
ENSXMAG00000003632	parp1	99	67.755	ENSDORG00000005234	Parp1	100	68.163	Dipodomys_ordii
ENSXMAG00000003632	parp1	99	41.454	FBgn0010247	Parp	99	41.454	Drosophila_melanogaster
ENSXMAG00000003632	parp1	87	78.906	ENSETEG00000013254	PARP1	88	78.906	Echinops_telfairi
ENSXMAG00000003632	parp1	97	59.226	ENSEBUG00000005820	parp1	100	59.178	Eptatretus_burgeri
ENSXMAG00000003632	parp1	98	69.038	ENSEASG00005013275	PARP1	99	69.639	Equus_asinus_asinus
ENSXMAG00000003632	parp1	99	68.602	ENSECAG00000019207	PARP1	99	69.488	Equus_caballus
ENSXMAG00000003632	parp1	99	66.470	ENSEEUG00000012253	PARP1	99	66.765	Erinaceus_europaeus
ENSXMAG00000003632	parp1	99	82.932	ENSELUG00000017336	parp1	100	81.675	Esox_lucius
ENSXMAG00000003632	parp1	97	68.794	ENSFCAG00000005777	PARP1	100	69.161	Felis_catus
ENSXMAG00000003632	parp1	99	72.597	ENSFALG00000011578	PARP1	100	73.108	Ficedula_albicollis
ENSXMAG00000003632	parp1	99	67.992	ENSFDAG00000017662	PARP1	100	67.992	Fukomys_damarensis
ENSXMAG00000003632	parp1	100	92.906	ENSFHEG00000001117	parp1	100	92.906	Fundulus_heteroclitus
ENSXMAG00000003632	parp1	99	82.220	ENSGMOG00000014929	parp1	100	82.220	Gadus_morhua
ENSXMAG00000003632	parp1	99	72.458	ENSGALG00000009228	PARP1	99	72.853	Gallus_gallus
ENSXMAG00000003632	parp1	100	98.424	ENSGAFG00000010450	parp1	100	98.424	Gambusia_affinis
ENSXMAG00000003632	parp1	100	87.807	ENSGACG00000011280	parp1	100	87.807	Gasterosteus_aculeatus
ENSXMAG00000003632	parp1	99	72.162	ENSGAGG00000010066	PARP1	99	72.512	Gopherus_agassizii
ENSXMAG00000003632	parp1	99	69.587	ENSGGOG00000006308	PARP1	99	69.587	Gorilla_gorilla
ENSXMAG00000003632	parp1	100	90.148	ENSHBUG00000010490	parp1	100	90.148	Haplochromis_burtoni
ENSXMAG00000003632	parp1	96	68.298	ENSHGLG00000003992	PARP1	93	68.298	Heterocephalus_glaber_female
ENSXMAG00000003632	parp1	96	68.298	ENSHGLG00100016965	PARP1	93	68.298	Heterocephalus_glaber_male
ENSXMAG00000003632	parp1	100	85.098	ENSHCOG00000011619	parp1	100	85.784	Hippocampus_comes
ENSXMAG00000003632	parp1	100	81.366	ENSIPUG00000020250	parp1	100	81.171	Ictalurus_punctatus
ENSXMAG00000003632	parp1	99	69.587	ENSSTOG00000016000	PARP1	99	69.587	Ictidomys_tridecemlineatus
ENSXMAG00000003632	parp1	99	68.276	ENSJJAG00000023497	Parp1	99	68.966	Jaculus_jaculus
ENSXMAG00000003632	parp1	100	90.345	ENSKMAG00000011627	parp1	100	90.345	Kryptolebias_marmoratus
ENSXMAG00000003632	parp1	100	89.951	ENSLBEG00000013376	parp1	100	89.951	Labrus_bergylta
ENSXMAG00000003632	parp1	99	56.483	ENSLACG00000002735	PARP1	99	56.667	Latimeria_chalumnae
ENSXMAG00000003632	parp1	100	79.449	ENSLOCG00000015798	parp1	100	79.628	Lepisosteus_oculatus
ENSXMAG00000003632	parp1	99	67.380	ENSLAFG00000007830	PARP1	100	67.686	Loxodonta_africana
ENSXMAG00000003632	parp1	99	69.587	ENSMFAG00000002526	PARP1	99	69.587	Macaca_fascicularis
ENSXMAG00000003632	parp1	99	69.685	ENSMMUG00000021820	PARP1	99	69.685	Macaca_mulatta
ENSXMAG00000003632	parp1	99	69.587	ENSMNEG00000034074	PARP1	99	69.587	Macaca_nemestrina
ENSXMAG00000003632	parp1	99	68.008	ENSMLEG00000012344	PARP1	99	67.910	Mandrillus_leucophaeus
ENSXMAG00000003632	parp1	100	90.443	ENSMAMG00000020652	parp1	100	90.443	Mastacembelus_armatus
ENSXMAG00000003632	parp1	100	90.345	ENSMZEG00005016907	parp1	100	90.345	Maylandia_zebra
ENSXMAG00000003632	parp1	99	72.262	ENSMGAG00000007760	PARP1	100	72.262	Meleagris_gallopavo
ENSXMAG00000003632	parp1	99	69.261	ENSMAUG00000008306	Parp1	99	69.261	Mesocricetus_auratus
ENSXMAG00000003632	parp1	99	66.535	ENSMICG00000017076	PARP1	99	66.535	Microcebus_murinus
ENSXMAG00000003632	parp1	99	69.064	ENSMOCG00000014315	Parp1	99	69.163	Microtus_ochrogaster
ENSXMAG00000003632	parp1	100	88.627	ENSMMOG00000015966	parp1	100	87.745	Mola_mola
ENSXMAG00000003632	parp1	99	70.710	ENSMODG00000006076	PARP1	99	70.710	Monodelphis_domestica
ENSXMAG00000003632	parp1	100	86.305	ENSMALG00000004057	parp1	100	86.305	Monopterus_albus
ENSXMAG00000003632	parp1	99	69.685	MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	Mus_caroli
ENSXMAG00000003632	parp1	99	69.587	ENSMUSG00000026496	Parp1	99	78.571	Mus_musculus
ENSXMAG00000003632	parp1	99	69.587	MGP_SPRETEiJ_G0015777	Parp1	100	78.571	Mus_spretus
ENSXMAG00000003632	parp1	99	69.450	ENSMPUG00000004585	PARP1	99	69.450	Mustela_putorius_furo
ENSXMAG00000003632	parp1	90	58.442	ENSMLUG00000012285	PARP1	100	58.658	Myotis_lucifugus
ENSXMAG00000003632	parp1	99	68.374	ENSNGAG00000003885	Parp1	99	68.867	Nannospalax_galili
ENSXMAG00000003632	parp1	100	89.163	ENSNBRG00000017434	parp1	100	89.163	Neolamprologus_brichardi
ENSXMAG00000003632	parp1	95	75.703	ENSNLEG00000013905	PARP1	99	75.703	Nomascus_leucogenys
ENSXMAG00000003632	parp1	67	79.104	ENSMEUG00000007720	PARP1	87	79.104	Notamacropus_eugenii
ENSXMAG00000003632	parp1	99	70.177	ENSOPRG00000011722	PARP1	99	70.472	Ochotona_princeps
ENSXMAG00000003632	parp1	99	68.338	ENSODEG00000007424	PARP1	99	68.535	Octodon_degus
ENSXMAG00000003632	parp1	100	89.754	ENSONIG00000013486	parp1	100	89.754	Oreochromis_niloticus
ENSXMAG00000003632	parp1	99	71.399	ENSOANG00000001488	PARP1	100	71.604	Ornithorhynchus_anatinus
ENSXMAG00000003632	parp1	99	69.518	ENSOCUG00000017820	PARP1	99	70.305	Oryctolagus_cuniculus
ENSXMAG00000003632	parp1	100	88.079	ENSORLG00000013691	parp1	100	88.079	Oryzias_latipes
ENSXMAG00000003632	parp1	99	88.187	ENSORLG00020001074	parp1	99	88.187	Oryzias_latipes_hni
ENSXMAG00000003632	parp1	100	88.177	ENSORLG00015007090	parp1	100	88.177	Oryzias_latipes_hsok
ENSXMAG00000003632	parp1	99	69.488	ENSOGAG00000016206	PARP1	99	69.390	Otolemur_garnettii
ENSXMAG00000003632	parp1	99	68.043	ENSOARG00000000811	PARP1	99	68.535	Ovis_aries
ENSXMAG00000003632	parp1	99	69.390	ENSPPAG00000040862	PARP1	99	69.390	Pan_paniscus
ENSXMAG00000003632	parp1	96	68.603	ENSPPRG00000003528	PARP1	100	68.667	Panthera_pardus
ENSXMAG00000003632	parp1	93	58.159	ENSPTIG00000009102	PARP1	98	58.027	Panthera_tigris_altaica
ENSXMAG00000003632	parp1	99	69.390	ENSPTRG00000002049	PARP1	99	69.390	Pan_troglodytes
ENSXMAG00000003632	parp1	99	69.715	ENSPANG00000011198	PARP1	99	69.715	Papio_anubis
ENSXMAG00000003632	parp1	100	80.236	ENSPKIG00000006039	parp1	100	80.138	Paramormyrops_kingsleyae
ENSXMAG00000003632	parp1	99	71.764	ENSPSIG00000016374	PARP1	100	71.996	Pelodiscus_sinensis
ENSXMAG00000003632	parp1	100	83.415	ENSPMGG00000008936	parp1	100	83.415	Periophthalmus_magnuspinnatus
ENSXMAG00000003632	parp1	99	69.852	ENSPEMG00000020230	Parp1	99	69.852	Peromyscus_maniculatus_bairdii
ENSXMAG00000003632	parp1	99	70.345	ENSPCIG00000006436	PARP1	99	73.167	Phascolarctos_cinereus
ENSXMAG00000003632	parp1	100	95.862	ENSPFOG00000002342	parp1	100	95.862	Poecilia_formosa
ENSXMAG00000003632	parp1	100	97.438	ENSPLAG00000000909	parp1	100	97.438	Poecilia_latipinna
ENSXMAG00000003632	parp1	100	97.931	ENSPMEG00000013979	parp1	100	97.931	Poecilia_mexicana
ENSXMAG00000003632	parp1	100	97.340	ENSPREG00000001114	parp1	100	97.340	Poecilia_reticulata
ENSXMAG00000003632	parp1	96	69.152	ENSPPYG00000000164	PARP1	100	69.152	Pongo_abelii
ENSXMAG00000003632	parp1	60	78.395	ENSPCAG00000005558	-	59	78.395	Procavia_capensis
ENSXMAG00000003632	parp1	99	69.488	ENSPCOG00000016918	PARP1	99	69.843	Propithecus_coquereli
ENSXMAG00000003632	parp1	91	76.887	ENSPVAG00000005543	PARP1	91	76.887	Pteropus_vampyrus
ENSXMAG00000003632	parp1	100	89.261	ENSPNYG00000009702	parp1	100	89.261	Pundamilia_nyererei
ENSXMAG00000003632	parp1	100	81.898	ENSPNAG00000002787	parp1	100	83.089	Pygocentrus_nattereri
ENSXMAG00000003632	parp1	99	69.291	ENSRNOG00000003084	Parp1	99	69.587	Rattus_norvegicus
ENSXMAG00000003632	parp1	99	69.587	ENSRBIG00000044893	PARP1	99	70.883	Rhinopithecus_bieti
ENSXMAG00000003632	parp1	99	69.587	ENSRROG00000029280	PARP1	99	70.883	Rhinopithecus_roxellana
ENSXMAG00000003632	parp1	99	52.320	ENSRROG00000040615	-	97	59.481	Rhinopithecus_roxellana
ENSXMAG00000003632	parp1	99	70.374	ENSSBOG00000010144	PARP1	99	70.374	Saimiri_boliviensis_boliviensis
ENSXMAG00000003632	parp1	99	70.348	ENSSHAG00000001991	PARP1	100	70.552	Sarcophilus_harrisii
ENSXMAG00000003632	parp1	100	81.275	ENSSFOG00015020017	parp1	100	80.980	Scleropages_formosus
ENSXMAG00000003632	parp1	100	88.177	ENSSMAG00000013799	parp1	100	88.177	Scophthalmus_maximus
ENSXMAG00000003632	parp1	100	90.837	ENSSDUG00000016626	parp1	100	90.837	Seriola_dumerili
ENSXMAG00000003632	parp1	100	90.640	ENSSLDG00000006384	parp1	100	90.640	Seriola_lalandi_dorsalis
ENSXMAG00000003632	parp1	53	76.389	ENSSARG00000009436	-	59	76.389	Sorex_araneus
ENSXMAG00000003632	parp1	99	67.984	ENSSPUG00000007790	PARP1	99	68.738	Sphenodon_punctatus
ENSXMAG00000003632	parp1	100	87.303	ENSSPAG00000019074	parp1	100	90.753	Stegastes_partitus
ENSXMAG00000003632	parp1	99	68.799	ENSSSCG00000023660	PARP1	99	69.253	Sus_scrofa
ENSXMAG00000003632	parp1	97	71.650	ENSTGUG00000004260	-	100	72.204	Taeniopygia_guttata
ENSXMAG00000003632	parp1	100	86.700	ENSTRUG00000014490	parp1	100	86.700	Takifugu_rubripes
ENSXMAG00000003632	parp1	100	85.630	ENSTNIG00000016384	parp1	100	85.533	Tetraodon_nigroviridis
ENSXMAG00000003632	parp1	81	77.733	ENSTBEG00000002364	PARP1	91	77.733	Tupaia_belangeri
ENSXMAG00000003632	parp1	99	64.469	ENSTTRG00000000188	PARP1	99	65.256	Tursiops_truncatus
ENSXMAG00000003632	parp1	96	69.043	ENSUAMG00000014388	PARP1	100	69.043	Ursus_americanus
ENSXMAG00000003632	parp1	96	62.322	ENSUMAG00000014555	PARP1	99	62.652	Ursus_maritimus
ENSXMAG00000003632	parp1	83	78.039	ENSVPAG00000011411	PARP1	83	78.039	Vicugna_pacos
ENSXMAG00000003632	parp1	96	68.641	ENSVVUG00000001655	PARP1	100	68.948	Vulpes_vulpes
ENSXMAG00000003632	parp1	98	68.694	ENSXETG00000022610	parp1	99	68.155	Xenopus_tropicalis