EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003641 (Gene tree)
Gene ID: 102218257
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 10695 bases
Position: chr4:23162930-23173624
Accession: 102218257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037376	ResIII	PF04851.15	1.9e-15	1	1
ENSXMAP00000003668	ResIII	PF04851.15	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000023571	-	2450	-	ENSXMAP00000037376	714 (aa)	-	-
ENSXMAT00000003673	-	2352	XM_023333006	ENSXMAP00000003668	783 (aa)	XP_023188774	M3ZN75

Gene Model

Click here to download ENSXMAG00000003641's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03022	Basal transcription factors	KEGG
xma03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003641	ercc3	100	88.041	ENSG00000163161	ERCC3	99	97.516	Homo_sapiens
ENSXMAG00000003641	ercc3	100	95.275	ENSAPOG00000014383	ercc3	100	95.275	Acanthochromis_polyacanthus
ENSXMAG00000003641	ercc3	100	88.041	ENSAMEG00000016840	ERCC3	100	88.677	Ailuropoda_melanoleuca
ENSXMAG00000003641	ercc3	99	95.226	ENSACIG00000000126	ercc3	100	95.226	Amphilophus_citrinellus
ENSXMAG00000003641	ercc3	100	95.658	ENSAOCG00000009396	ercc3	100	95.658	Amphiprion_ocellaris
ENSXMAG00000003641	ercc3	100	95.530	ENSAPEG00000023077	ercc3	100	95.530	Amphiprion_percula
ENSXMAG00000003641	ercc3	100	94.764	ENSATEG00000014860	ercc3	100	94.764	Anabas_testudineus
ENSXMAG00000003641	ercc3	94	89.387	ENSAPLG00000012068	ERCC3	98	87.904	Anas_platyrhynchos
ENSXMAG00000003641	ercc3	94	90.208	ENSACAG00000009919	ERCC3	100	89.058	Anolis_carolinensis
ENSXMAG00000003641	ercc3	100	87.913	ENSANAG00000031091	ERCC3	100	87.913	Aotus_nancymaae
ENSXMAG00000003641	ercc3	100	95.147	ENSACLG00000022508	ercc3	100	95.147	Astatotilapia_calliptera
ENSXMAG00000003641	ercc3	100	92.082	ENSAMXG00000036947	ercc3	100	92.082	Astyanax_mexicanus
ENSXMAG00000003641	ercc3	100	87.659	ENSBTAG00000020777	ERCC3	100	87.659	Bos_taurus
ENSXMAG00000003641	ercc3	99	62.030	WBGene00013441	xpb-1	99	62.155	Caenorhabditis_elegans
ENSXMAG00000003641	ercc3	100	88.422	ENSCJAG00000010416	ERCC3	100	88.422	Callithrix_jacchus
ENSXMAG00000003641	ercc3	97	88.786	ENSCAFG00000004497	ERCC3	100	87.643	Canis_familiaris
ENSXMAG00000003641	ercc3	97	88.786	ENSCAFG00020003495	ERCC3	100	87.643	Canis_lupus_dingo
ENSXMAG00000003641	ercc3	100	87.659	ENSCHIG00000014551	ERCC3	100	87.659	Capra_hircus
ENSXMAG00000003641	ercc3	99	87.773	ENSTSYG00000004137	ERCC3	99	87.773	Carlito_syrichta
ENSXMAG00000003641	ercc3	79	81.449	ENSCAPG00000017027	ERCC3	93	80.782	Cavia_aperea
ENSXMAG00000003641	ercc3	100	86.896	ENSCPOG00000002144	ERCC3	100	87.532	Cavia_porcellus
ENSXMAG00000003641	ercc3	100	88.041	ENSCCAG00000024421	ERCC3	100	88.041	Cebus_capucinus
ENSXMAG00000003641	ercc3	100	88.041	ENSCATG00000032313	ERCC3	100	88.041	Cercocebus_atys
ENSXMAG00000003641	ercc3	100	87.023	ENSCLAG00000002965	ERCC3	96	87.532	Chinchilla_lanigera
ENSXMAG00000003641	ercc3	100	87.913	ENSCSAG00000016827	ERCC3	100	87.913	Chlorocebus_sabaeus
ENSXMAG00000003641	ercc3	83	95.322	ENSCHOG00000007414	ERCC3	83	95.322	Choloepus_hoffmanni
ENSXMAG00000003641	ercc3	94	90.208	ENSCPBG00000013638	ERCC3	100	88.920	Chrysemys_picta_bellii
ENSXMAG00000003641	ercc3	94	74.080	ENSCING00000002867	ercc3	95	71.298	Ciona_intestinalis
ENSXMAG00000003641	ercc3	100	88.422	ENSCANG00000007094	ERCC3	100	88.422	Colobus_angolensis_palliatus
ENSXMAG00000003641	ercc3	100	88.295	ENSCGRG00001009426	Ercc3	100	88.550	Cricetulus_griseus_chok1gshd
ENSXMAG00000003641	ercc3	97	87.795	ENSCGRG00000015547	Ercc3	100	88.058	Cricetulus_griseus_crigri
ENSXMAG00000003641	ercc3	100	91.975	ENSCSEG00000016479	ercc3	100	91.975	Cynoglossus_semilaevis
ENSXMAG00000003641	ercc3	100	97.190	ENSCVAG00000015177	ercc3	100	97.190	Cyprinodon_variegatus
ENSXMAG00000003641	ercc3	98	92.057	ENSDARG00000002402	ercc3	100	91.709	Danio_rerio
ENSXMAG00000003641	ercc3	55	95.685	ENSDNOG00000035027	ERCC3	95	93.213	Dasypus_novemcinctus
ENSXMAG00000003641	ercc3	96	89.418	ENSDORG00000004671	Ercc3	100	88.025	Dipodomys_ordii
ENSXMAG00000003641	ercc3	95	72.727	FBgn0001179	hay	94	70.588	Drosophila_melanogaster
ENSXMAG00000003641	ercc3	90	89.348	ENSETEG00000019887	ERCC3	90	89.348	Echinops_telfairi
ENSXMAG00000003641	ercc3	100	80.126	ENSEBUG00000009773	ercc3	100	80.126	Eptatretus_burgeri
ENSXMAG00000003641	ercc3	100	84.988	ENSEASG00005022466	ERCC3	100	85.236	Equus_asinus_asinus
ENSXMAG00000003641	ercc3	100	87.405	ENSECAG00000006589	ERCC3	100	87.405	Equus_caballus
ENSXMAG00000003641	ercc3	94	89.645	ENSEEUG00000001057	ERCC3	99	88.356	Erinaceus_europaeus
ENSXMAG00000003641	ercc3	100	90.318	ENSELUG00000000089	ercc3	99	90.318	Esox_lucius
ENSXMAG00000003641	ercc3	100	87.532	ENSFCAG00000006989	ERCC3	100	87.913	Felis_catus
ENSXMAG00000003641	ercc3	99	86.229	ENSFALG00000003936	ERCC3	99	86.100	Ficedula_albicollis
ENSXMAG00000003641	ercc3	100	86.768	ENSFDAG00000011924	ERCC3	100	87.405	Fukomys_damarensis
ENSXMAG00000003641	ercc3	100	96.169	ENSFHEG00000005185	ercc3	100	96.169	Fundulus_heteroclitus
ENSXMAG00000003641	ercc3	100	89.017	ENSGMOG00000018032	ercc3	99	89.017	Gadus_morhua
ENSXMAG00000003641	ercc3	96	87.302	ENSGALG00000011515	ERCC3	100	85.732	Gallus_gallus
ENSXMAG00000003641	ercc3	100	99.361	ENSGAFG00000011936	ercc3	100	99.361	Gambusia_affinis
ENSXMAG00000003641	ercc3	100	92.994	ENSGACG00000015218	ercc3	100	92.994	Gasterosteus_aculeatus
ENSXMAG00000003641	ercc3	94	90.356	ENSGAGG00000018579	ERCC3	100	89.058	Gopherus_agassizii
ENSXMAG00000003641	ercc3	100	88.041	ENSGGOG00000015255	ERCC3	100	88.041	Gorilla_gorilla
ENSXMAG00000003641	ercc3	100	95.147	ENSHBUG00000003818	ercc3	100	95.147	Haplochromis_burtoni
ENSXMAG00000003641	ercc3	100	87.532	ENSHGLG00000011014	ERCC3	100	88.168	Heterocephalus_glaber_female
ENSXMAG00000003641	ercc3	100	87.532	ENSHGLG00100013806	ERCC3	100	88.168	Heterocephalus_glaber_male
ENSXMAG00000003641	ercc3	100	92.337	ENSHCOG00000016924	ercc3	100	92.337	Hippocampus_comes
ENSXMAG00000003641	ercc3	100	91.443	ENSIPUG00000021000	ercc3	100	91.443	Ictalurus_punctatus
ENSXMAG00000003641	ercc3	100	87.405	ENSSTOG00000011001	ERCC3	100	87.659	Ictidomys_tridecemlineatus
ENSXMAG00000003641	ercc3	92	88.805	ENSJJAG00000001117	Ercc3	100	87.870	Jaculus_jaculus
ENSXMAG00000003641	ercc3	100	94.764	ENSKMAG00000021764	ercc3	100	94.764	Kryptolebias_marmoratus
ENSXMAG00000003641	ercc3	100	93.742	ENSLBEG00000000468	ercc3	100	93.742	Labrus_bergylta
ENSXMAG00000003641	ercc3	96	83.963	ENSLACG00000014815	ERCC3	100	82.685	Latimeria_chalumnae
ENSXMAG00000003641	ercc3	95	88.158	ENSLOCG00000010907	ercc3	87	88.418	Lepisosteus_oculatus
ENSXMAG00000003641	ercc3	100	87.532	ENSLAFG00000014866	ERCC3	100	87.913	Loxodonta_africana
ENSXMAG00000003641	ercc3	100	88.041	ENSMFAG00000003370	ERCC3	100	88.041	Macaca_fascicularis
ENSXMAG00000003641	ercc3	100	84.296	ENSMNEG00000004215	ERCC3	100	84.296	Macaca_nemestrina
ENSXMAG00000003641	ercc3	100	88.041	ENSMLEG00000042061	ERCC3	100	88.041	Mandrillus_leucophaeus
ENSXMAG00000003641	ercc3	100	94.125	ENSMAMG00000004505	ercc3	99	94.125	Mastacembelus_armatus
ENSXMAG00000003641	ercc3	100	95.147	ENSMZEG00005004854	ercc3	100	95.147	Maylandia_zebra
ENSXMAG00000003641	ercc3	92	89.545	ENSMGAG00000011706	ERCC3	100	88.277	Meleagris_gallopavo
ENSXMAG00000003641	ercc3	100	87.548	ENSMAUG00000004515	Ercc3	100	88.183	Mesocricetus_auratus
ENSXMAG00000003641	ercc3	100	87.405	ENSMICG00000009578	ERCC3	100	87.532	Microcebus_murinus
ENSXMAG00000003641	ercc3	100	88.041	ENSMOCG00000021767	Ercc3	100	88.295	Microtus_ochrogaster
ENSXMAG00000003641	ercc3	99	92.765	ENSMMOG00000018174	ercc3	99	92.765	Mola_mola
ENSXMAG00000003641	ercc3	96	89.286	ENSMODG00000018695	ERCC3	100	88.422	Monodelphis_domestica
ENSXMAG00000003641	ercc3	100	93.742	ENSMALG00000014944	ercc3	100	93.742	Monopterus_albus
ENSXMAG00000003641	ercc3	100	88.295	MGP_CAROLIEiJ_G0022075	Ercc3	100	88.422	Mus_caroli
ENSXMAG00000003641	ercc3	100	88.310	ENSMUSG00000024382	Ercc3	100	88.437	Mus_musculus
ENSXMAG00000003641	ercc3	100	88.041	MGP_PahariEiJ_G0018809	Ercc3	100	88.168	Mus_pahari
ENSXMAG00000003641	ercc3	100	88.183	MGP_SPRETEiJ_G0022987	Ercc3	100	88.310	Mus_spretus
ENSXMAG00000003641	ercc3	100	87.786	ENSMPUG00000012021	ERCC3	100	87.913	Mustela_putorius_furo
ENSXMAG00000003641	ercc3	91	89.177	ENSMLUG00000007429	ERCC3	99	85.342	Myotis_lucifugus
ENSXMAG00000003641	ercc3	94	90.653	ENSNGAG00000019598	Ercc3	99	89.552	Nannospalax_galili
ENSXMAG00000003641	ercc3	100	95.147	ENSNBRG00000019074	ercc3	100	95.147	Neolamprologus_brichardi
ENSXMAG00000003641	ercc3	94	88.244	ENSNLEG00000015665	ERCC3	97	87.361	Nomascus_leucogenys
ENSXMAG00000003641	ercc3	100	86.387	ENSOPRG00000004553	ERCC3	100	86.260	Ochotona_princeps
ENSXMAG00000003641	ercc3	100	87.532	ENSODEG00000005795	ERCC3	100	88.041	Octodon_degus
ENSXMAG00000003641	ercc3	100	95.402	ENSONIG00000003255	ercc3	100	95.402	Oreochromis_niloticus
ENSXMAG00000003641	ercc3	100	87.405	ENSOCUG00000002248	ERCC3	100	87.786	Oryctolagus_cuniculus
ENSXMAG00000003641	ercc3	100	92.593	ENSORLG00000004393	ercc3	100	92.593	Oryzias_latipes
ENSXMAG00000003641	ercc3	100	92.474	ENSORLG00020017718	ercc3	100	92.474	Oryzias_latipes_hni
ENSXMAG00000003641	ercc3	100	92.720	ENSORLG00015015695	ercc3	100	92.720	Oryzias_latipes_hsok
ENSXMAG00000003641	ercc3	100	93.359	ENSOMEG00000015374	ercc3	100	93.359	Oryzias_melastigma
ENSXMAG00000003641	ercc3	100	87.437	ENSOGAG00000009103	ERCC3	100	87.563	Otolemur_garnettii
ENSXMAG00000003641	ercc3	100	87.532	ENSOARG00000016147	ERCC3	100	87.532	Ovis_aries
ENSXMAG00000003641	ercc3	100	88.041	ENSPPAG00000036166	ERCC3	100	88.041	Pan_paniscus
ENSXMAG00000003641	ercc3	100	87.659	ENSPPRG00000001305	ERCC3	100	88.041	Panthera_pardus
ENSXMAG00000003641	ercc3	94	90.504	ENSPTIG00000016969	ERCC3	100	89.335	Panthera_tigris_altaica
ENSXMAG00000003641	ercc3	100	88.041	ENSPTRG00000046940	ERCC3	100	88.041	Pan_troglodytes
ENSXMAG00000003641	ercc3	100	88.041	ENSPANG00000007699	ERCC3	100	88.041	Papio_anubis
ENSXMAG00000003641	ercc3	100	90.179	ENSPKIG00000001319	ercc3	99	91.391	Paramormyrops_kingsleyae
ENSXMAG00000003641	ercc3	94	89.911	ENSPSIG00000014682	ERCC3	100	88.781	Pelodiscus_sinensis
ENSXMAG00000003641	ercc3	95	94.978	ENSPMGG00000017885	ercc3	99	92.976	Periophthalmus_magnuspinnatus
ENSXMAG00000003641	ercc3	100	88.168	ENSPEMG00000013733	Ercc3	100	88.422	Peromyscus_maniculatus_bairdii
ENSXMAG00000003641	ercc3	89	82.582	ENSPMAG00000005081	ercc3	99	78.552	Petromyzon_marinus
ENSXMAG00000003641	ercc3	100	87.883	ENSPCIG00000011821	ERCC3	100	88.422	Phascolarctos_cinereus
ENSXMAG00000003641	ercc3	100	98.723	ENSPFOG00000015604	ercc3	100	98.723	Poecilia_formosa
ENSXMAG00000003641	ercc3	100	96.051	ENSPLAG00000022245	ercc3	100	99.029	Poecilia_latipinna
ENSXMAG00000003641	ercc3	100	98.723	ENSPMEG00000016987	ercc3	100	98.723	Poecilia_mexicana
ENSXMAG00000003641	ercc3	100	98.340	ENSPREG00000020921	ercc3	100	98.340	Poecilia_reticulata
ENSXMAG00000003641	ercc3	100	87.294	ENSPPYG00000012769	ERCC3	100	87.294	Pongo_abelii
ENSXMAG00000003641	ercc3	100	87.659	ENSPCOG00000024903	ERCC3	100	87.659	Propithecus_coquereli
ENSXMAG00000003641	ercc3	90	88.372	ENSPVAG00000013774	ERCC3	90	88.372	Pteropus_vampyrus
ENSXMAG00000003641	ercc3	100	95.147	ENSPNYG00000001208	ercc3	100	95.147	Pundamilia_nyererei
ENSXMAG00000003641	ercc3	100	91.826	ENSPNAG00000005748	ercc3	100	91.826	Pygocentrus_nattereri
ENSXMAG00000003641	ercc3	100	88.295	ENSRNOG00000013180	Ercc3	100	88.422	Rattus_norvegicus
ENSXMAG00000003641	ercc3	100	88.041	ENSRBIG00000027692	ERCC3	100	88.041	Rhinopithecus_bieti
ENSXMAG00000003641	ercc3	100	88.041	ENSRROG00000040673	ERCC3	100	88.041	Rhinopithecus_roxellana
ENSXMAG00000003641	ercc3	94	58.555	YIL143C	SSL2	85	55.435	Saccharomyces_cerevisiae
ENSXMAG00000003641	ercc3	100	87.659	ENSSBOG00000023079	ERCC3	100	87.659	Saimiri_boliviensis_boliviensis
ENSXMAG00000003641	ercc3	96	89.286	ENSSHAG00000007423	ERCC3	100	88.295	Sarcophilus_harrisii
ENSXMAG00000003641	ercc3	95	92.751	ENSSFOG00015012753	ercc3	100	89.413	Scleropages_formosus
ENSXMAG00000003641	ercc3	100	93.121	ENSSMAG00000011915	ercc3	100	93.121	Scophthalmus_maximus
ENSXMAG00000003641	ercc3	100	94.891	ENSSDUG00000021181	ercc3	100	94.891	Seriola_dumerili
ENSXMAG00000003641	ercc3	100	95.147	ENSSLDG00000008744	ercc3	98	95.147	Seriola_lalandi_dorsalis
ENSXMAG00000003641	ercc3	61	80.000	ENSSARG00000000751	-	85	80.000	Sorex_araneus
ENSXMAG00000003641	ercc3	92	88.788	ENSSPUG00000015183	ERCC3	91	87.571	Sphenodon_punctatus
ENSXMAG00000003641	ercc3	100	95.913	ENSSPAG00000004748	ercc3	100	95.913	Stegastes_partitus
ENSXMAG00000003641	ercc3	100	87.405	ENSSSCG00000015721	ERCC3	100	94.118	Sus_scrofa
ENSXMAG00000003641	ercc3	99	88.015	ENSTGUG00000004920	-	99	87.887	Taeniopygia_guttata
ENSXMAG00000003641	ercc3	100	92.465	ENSTRUG00000017185	ercc3	100	92.465	Takifugu_rubripes
ENSXMAG00000003641	ercc3	98	89.804	ENSTNIG00000005457	ercc3	99	90.861	Tetraodon_nigroviridis
ENSXMAG00000003641	ercc3	81	89.501	ENSTBEG00000009381	ERCC3	81	88.553	Tupaia_belangeri
ENSXMAG00000003641	ercc3	68	95.436	ENSUAMG00000009589	-	100	93.585	Ursus_americanus
ENSXMAG00000003641	ercc3	100	87.659	ENSUMAG00000008361	ERCC3	100	88.041	Ursus_maritimus
ENSXMAG00000003641	ercc3	94	90.208	ENSVVUG00000010431	ERCC3	100	89.197	Vulpes_vulpes
ENSXMAG00000003641	ercc3	100	87.199	ENSXETG00000033646	ercc3	100	87.072	Xenopus_tropicalis
ENSXMAG00000003641	ercc3	99	98.837	ENSXCOG00000001791	ercc3	99	98.837	Xiphophorus_couchianus