EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000003753 (Gene tree)
Gene ID
102234856
Gene Symbol
pabpc1b
Alias
-
Full Name
14-3-3 protein beta/alpha-B-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
22048 bases
Position
chr13:1344233-1366280
Accession
102234596
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000003775PABPPF00658.185.6e-3211
ENSXMAP00000028319RRM_5PF13893.61.6e-0912
ENSXMAP00000028319RRM_5PF13893.61.6e-0922
ENSXMAP00000003775RRM_5PF13893.61.1e-0812
ENSXMAP00000003775RRM_5PF13893.61.1e-0822
ENSXMAP00000028319RRM_1PF00076.221.6e-9014
ENSXMAP00000028319RRM_1PF00076.221.6e-9024
ENSXMAP00000028319RRM_1PF00076.221.6e-9034
ENSXMAP00000028319RRM_1PF00076.221.6e-9044
ENSXMAP00000003775RRM_1PF00076.221.7e-8914
ENSXMAP00000003775RRM_1PF00076.221.7e-8924
ENSXMAP00000003775RRM_1PF00076.221.7e-8934
ENSXMAP00000003775RRM_1PF00076.221.7e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000040976-1236-ENSXMAP00000028319411 (aa)--
ENSXMAT00000003780-2359XM_005797394ENSXMAP00000003775634 (aa)XP_005797451M3ZNI2
ENSXMAT00000035994-5625XM_005797393ENSXMAP00000041274250 (aa)XP_005797450M3ZNG7
Gene Model
Click here to download ENSXMAG00000003753's gene model file
Pathways
Pathway IDPathway NameSource
xma03013RNA transportKEGG
xma03015mRNA surveillance pathwayKEGG
xma03018RNA degradationKEGG
xma04110Cell cycleKEGG
xma04114Oocyte meiosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003753's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000003753pabpc1b8979.592ENSG00000186288PABPC1L2A9879.592Homo_sapiens
ENSXMAG00000003753pabpc1b8979.592ENSG00000184388PABPC1L2B9879.592Homo_sapiens
ENSXMAG00000003753pabpc1b10090.596ENSAPOG00000015105pabpc1a10090.282Acanthochromis_polyacanthus
ENSXMAG00000003753pabpc1b10095.899ENSAPOG00000017776pabpc1b10095.899Acanthochromis_polyacanthus
ENSXMAG00000003753pabpc1b8979.592ENSAMEG00000019441-9879.592Ailuropoda_melanoleuca
ENSXMAG00000003753pabpc1b10089.905ENSACIG00000018366pabpc1b10087.963Amphilophus_citrinellus
ENSXMAG00000003753pabpc1b10090.282ENSACIG00000004685pabpc1a10090.125Amphilophus_citrinellus
ENSXMAG00000003753pabpc1b10095.741ENSAOCG00000019839pabpc1b10095.741Amphiprion_ocellaris
ENSXMAG00000003753pabpc1b10090.282ENSAOCG00000011656pabpc1a10089.185Amphiprion_ocellaris
ENSXMAG00000003753pabpc1b10090.282ENSAPEG00000006963pabpc1a10089.185Amphiprion_percula
ENSXMAG00000003753pabpc1b10095.741ENSAPEG00000010435pabpc1b10095.741Amphiprion_percula
ENSXMAG00000003753pabpc1b10090.125ENSATEG00000024852pabpc1a10090.125Anabas_testudineus
ENSXMAG00000003753pabpc1b10094.811ENSATEG00000012917pabpc1b10094.811Anabas_testudineus
ENSXMAG00000003753pabpc1b8979.592ENSANAG00000019429-9879.592Aotus_nancymaae
ENSXMAG00000003753pabpc1b8979.592ENSANAG00000019431-9879.592Aotus_nancymaae
ENSXMAG00000003753pabpc1b9991.533ENSACLG00000009399pabpc1a10091.364Astatotilapia_calliptera
ENSXMAG00000003753pabpc1b10094.006ENSACLG00000014335pabpc1b10094.006Astatotilapia_calliptera
ENSXMAG00000003753pabpc1b10093.543ENSAMXG00000008599pabpc1b10093.071Astyanax_mexicanus
ENSXMAG00000003753pabpc1b9079.397ENSBTAG00000050902-9878.537Bos_taurus
ENSXMAG00000003753pabpc1b9078.894ENSBTAG00000052491-9778.894Bos_taurus
ENSXMAG00000003753pabpc1b8979.592ENSCJAG00000041326-9879.592Callithrix_jacchus
ENSXMAG00000003753pabpc1b9079.397ENSCAFG00020002052-9878.537Canis_lupus_dingo
ENSXMAG00000003753pabpc1b8979.592ENSCHIG00000011138-9879.592Capra_hircus
ENSXMAG00000003753pabpc1b8979.592ENSCHIG00000006283-9879.592Capra_hircus
ENSXMAG00000003753pabpc1b8979.592ENSTSYG00000001775-9879.592Carlito_syrichta
ENSXMAG00000003753pabpc1b8979.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSXMAG00000003753pabpc1b8979.592ENSCCAG00000031524-9879.592Cebus_capucinus
ENSXMAG00000003753pabpc1b8979.592ENSCATG00000042826-9879.592Cercocebus_atys
ENSXMAG00000003753pabpc1b8979.592ENSCATG00000043125-9879.592Cercocebus_atys
ENSXMAG00000003753pabpc1b8978.571ENSCLAG00000017409-9878.571Chinchilla_lanigera
ENSXMAG00000003753pabpc1b8978.571ENSCLAG00000017412-9878.571Chinchilla_lanigera
ENSXMAG00000003753pabpc1b8979.592ENSCSAG00000000102-9879.592Chlorocebus_sabaeus
ENSXMAG00000003753pabpc1b8880.110ENSCGRG00001023387-9677.949Cricetulus_griseus_chok1gshd
ENSXMAG00000003753pabpc1b10090.694ENSCSEG00000015241-10090.694Cynoglossus_semilaevis
ENSXMAG00000003753pabpc1b9990.063ENSCSEG00000013324pabpc1a10089.905Cynoglossus_semilaevis
ENSXMAG00000003753pabpc1b10090.125ENSCVAG00000021872pabpc1a10089.185Cyprinodon_variegatus
ENSXMAG00000003753pabpc1b10096.063ENSCVAG00000005489pabpc1b10096.063Cyprinodon_variegatus
ENSXMAG00000003753pabpc1b10092.756ENSDARG00000021140pabpc1b10092.756Danio_rerio
ENSXMAG00000003753pabpc1b10090.252ENSDARG00000017219pabpc1a10089.623Danio_rerio
ENSXMAG00000003753pabpc1b8980.423ENSDNOG00000030926-9878.061Dasypus_novemcinctus
ENSXMAG00000003753pabpc1b8978.061ENSDORG00000011362-9878.061Dipodomys_ordii
ENSXMAG00000003753pabpc1b9078.218ENSEASG00005010399-9878.155Equus_asinus_asinus
ENSXMAG00000003753pabpc1b9078.218ENSECAG00000002620-9878.155Equus_caballus
ENSXMAG00000003753pabpc1b8975.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSXMAG00000003753pabpc1b9990.723ENSELUG00000003614pabpc1a10089.937Esox_lucius
ENSXMAG00000003753pabpc1b10091.837ENSELUG00000015062-10091.837Esox_lucius
ENSXMAG00000003753pabpc1b8959.910ENSELUG00000005389-9759.052Esox_lucius
ENSXMAG00000003753pabpc1b8979.592ENSFCAG00000039701-9879.592Felis_catus
ENSXMAG00000003753pabpc1b8979.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSXMAG00000003753pabpc1b10096.845ENSFHEG00000008186pabpc1b10096.845Fundulus_heteroclitus
ENSXMAG00000003753pabpc1b10090.125ENSFHEG00000018979pabpc1a10089.969Fundulus_heteroclitus
ENSXMAG00000003753pabpc1b8995.368ENSGMOG00000002448-10082.866Gadus_morhua
ENSXMAG00000003753pabpc1b9988.336ENSGMOG00000013448pabpc1a9988.336Gadus_morhua
ENSXMAG00000003753pabpc1b10099.527ENSGAFG00000010193pabpc1b10099.527Gambusia_affinis
ENSXMAG00000003753pabpc1b10089.655ENSGAFG00000019750pabpc1a10088.871Gambusia_affinis
ENSXMAG00000003753pabpc1b10092.031ENSGACG00000003771pabpc1b10092.031Gasterosteus_aculeatus
ENSXMAG00000003753pabpc1b10090.439ENSGACG00000003572pabpc1a10090.282Gasterosteus_aculeatus
ENSXMAG00000003753pabpc1b8979.592ENSGGOG00000043933-9879.592Gorilla_gorilla
ENSXMAG00000003753pabpc1b8979.592ENSGGOG00000038606-9879.592Gorilla_gorilla
ENSXMAG00000003753pabpc1b10094.006ENSHBUG00000002075pabpc1b10094.006Haplochromis_burtoni
ENSXMAG00000003753pabpc1b9991.533ENSHBUG00000020487pabpc1a10091.364Haplochromis_burtoni
ENSXMAG00000003753pabpc1b9379.592ENSHGLG00000019762-9879.592Heterocephalus_glaber_female
ENSXMAG00000003753pabpc1b9379.592ENSHGLG00000019668-9879.592Heterocephalus_glaber_female
ENSXMAG00000003753pabpc1b9379.592ENSHGLG00100020854-9879.592Heterocephalus_glaber_male
ENSXMAG00000003753pabpc1b9876.368ENSHCOG00000003175pabpc1b9981.915Hippocampus_comes
ENSXMAG00000003753pabpc1b10090.282ENSHCOG00000013502pabpc1a10090.125Hippocampus_comes
ENSXMAG00000003753pabpc1b10088.661ENSIPUG00000008848pabpc1a10088.504Ictalurus_punctatus
ENSXMAG00000003753pabpc1b9297.003ENSIPUG00000010791-10086.457Ictalurus_punctatus
ENSXMAG00000003753pabpc1b9455.224ENSIPUG00000018724-7655.224Ictalurus_punctatus
ENSXMAG00000003753pabpc1b9063.957ENSIPUG00000021244-6555.532Ictalurus_punctatus
ENSXMAG00000003753pabpc1b8980.102ENSSTOG00000022096-9880.102Ictidomys_tridecemlineatus
ENSXMAG00000003753pabpc1b8980.102ENSSTOG00000026028-9880.102Ictidomys_tridecemlineatus
ENSXMAG00000003753pabpc1b8979.082ENSJJAG00000007037-9879.082Jaculus_jaculus
ENSXMAG00000003753pabpc1b10090.282ENSKMAG00000000605pabpc1a10090.125Kryptolebias_marmoratus
ENSXMAG00000003753pabpc1b10094.164ENSKMAG00000008049pabpc1b10093.691Kryptolebias_marmoratus
ENSXMAG00000003753pabpc1b10089.969ENSLBEG00000024002-10089.812Labrus_bergylta
ENSXMAG00000003753pabpc1b10094.006ENSLBEG00000026845pabpc1b10094.006Labrus_bergylta
ENSXMAG00000003753pabpc1b8978.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSXMAG00000003753pabpc1b8979.188ENSMFAG00000028878-9879.188Macaca_fascicularis
ENSXMAG00000003753pabpc1b8979.592ENSMMUG00000037681-9879.592Macaca_mulatta
ENSXMAG00000003753pabpc1b8979.592ENSMMUG00000009740-9879.592Macaca_mulatta
ENSXMAG00000003753pabpc1b8979.592ENSMMUG00000039929-9879.592Macaca_mulatta
ENSXMAG00000003753pabpc1b8979.592ENSMNEG00000037732-9879.592Macaca_nemestrina
ENSXMAG00000003753pabpc1b8979.592ENSMLEG00000027495-9879.592Mandrillus_leucophaeus
ENSXMAG00000003753pabpc1b10095.110ENSMAMG00000014610pabpc1b10095.110Mastacembelus_armatus
ENSXMAG00000003753pabpc1b10089.812ENSMAMG00000004502-10090.227Mastacembelus_armatus
ENSXMAG00000003753pabpc1b9991.533ENSMZEG00005025416pabpc1a10091.364Maylandia_zebra
ENSXMAG00000003753pabpc1b10094.006ENSMZEG00005026745pabpc1b10094.006Maylandia_zebra
ENSXMAG00000003753pabpc1b8979.592ENSMICG00000047642-9879.592Microcebus_murinus
ENSXMAG00000003753pabpc1b9990.160ENSMMOG00000018044pabpc1a10090.000Mola_mola
ENSXMAG00000003753pabpc1b10088.486ENSMMOG00000018009pabpc1b10088.170Mola_mola
ENSXMAG00000003753pabpc1b9083.740ENSMODG00000013156-9873.280Monodelphis_domestica
ENSXMAG00000003753pabpc1b9277.596ENSMODG00000015024-9966.614Monodelphis_domestica
ENSXMAG00000003753pabpc1b10089.432ENSMALG00000006066pabpc1b10089.590Monopterus_albus
ENSXMAG00000003753pabpc1b10089.185ENSMALG00000013020-10089.342Monopterus_albus
ENSXMAG00000003753pabpc1b8981.967ENSNGAG00000012688-9879.082Nannospalax_galili
ENSXMAG00000003753pabpc1b10094.006ENSNBRG00000013737pabpc1b10094.006Neolamprologus_brichardi
ENSXMAG00000003753pabpc1b9991.533ENSNBRG00000003068-10091.364Neolamprologus_brichardi
ENSXMAG00000003753pabpc1b8979.592ENSNLEG00000018128-9879.592Nomascus_leucogenys
ENSXMAG00000003753pabpc1b8979.082ENSODEG00000018540-9879.082Octodon_degus
ENSXMAG00000003753pabpc1b10093.691ENSONIG00000002717pabpc1b10093.691Oreochromis_niloticus
ENSXMAG00000003753pabpc1b10090.125ENSONIG00000006871-10089.812Oreochromis_niloticus
ENSXMAG00000003753pabpc1b8979.592ENSOCUG00000002565-9879.592Oryctolagus_cuniculus
ENSXMAG00000003753pabpc1b9993.587ENSORLG00000002691pabpc1a9693.587Oryzias_latipes
ENSXMAG00000003753pabpc1b10086.751ENSORLG00000003008-10085.962Oryzias_latipes
ENSXMAG00000003753pabpc1b10086.751ENSORLG00020022259-10085.962Oryzias_latipes_hni
ENSXMAG00000003753pabpc1b10089.812ENSORLG00020022398pabpc1a10089.655Oryzias_latipes_hni
ENSXMAG00000003753pabpc1b10087.066ENSORLG00015010932-10086.278Oryzias_latipes_hsok
ENSXMAG00000003753pabpc1b10089.655ENSORLG00015013633pabpc110089.498Oryzias_latipes_hsok
ENSXMAG00000003753pabpc1b9985.126ENSOMEG00000013627pabpc1b10085.126Oryzias_melastigma
ENSXMAG00000003753pabpc1b10090.125ENSOMEG00000020219pabpc1a10090.125Oryzias_melastigma
ENSXMAG00000003753pabpc1b8979.592ENSOGAG00000026047-9879.592Otolemur_garnettii
ENSXMAG00000003753pabpc1b8979.592ENSOGAG00000029513-9879.592Otolemur_garnettii
ENSXMAG00000003753pabpc1b8979.592ENSOARG00000005943-9879.592Ovis_aries
ENSXMAG00000003753pabpc1b8979.592ENSPPAG00000012920-9879.592Pan_paniscus
ENSXMAG00000003753pabpc1b8979.592ENSPPRG00000011809-9879.592Panthera_pardus
ENSXMAG00000003753pabpc1b8979.592ENSPPRG00000011804-9879.592Panthera_pardus
ENSXMAG00000003753pabpc1b8979.592ENSPTRG00000028252-9879.592Pan_troglodytes
ENSXMAG00000003753pabpc1b8979.592ENSPANG00000011549-9879.592Papio_anubis
ENSXMAG00000003753pabpc1b10093.701ENSPKIG00000005676pabpc1b10093.386Paramormyrops_kingsleyae
ENSXMAG00000003753pabpc1b9292.916ENSPMGG00000022487pabpc1a9292.825Periophthalmus_magnuspinnatus
ENSXMAG00000003753pabpc1b9293.733ENSPMGG00000023134-9794.619Periophthalmus_magnuspinnatus
ENSXMAG00000003753pabpc1b8981.421ENSPCIG00000016995-5470.513Phascolarctos_cinereus
ENSXMAG00000003753pabpc1b10088.769ENSPFOG00000010815pabpc1a10088.752Poecilia_formosa
ENSXMAG00000003753pabpc1b10099.211ENSPFOG00000005917pabpc1b10099.211Poecilia_formosa
ENSXMAG00000003753pabpc1b10099.527ENSPLAG00000001388pabpc1b10099.527Poecilia_latipinna
ENSXMAG00000003753pabpc1b10090.282ENSPLAG00000004114pabpc1a10089.342Poecilia_latipinna
ENSXMAG00000003753pabpc1b10099.211ENSPMEG00000014399pabpc1b10099.211Poecilia_mexicana
ENSXMAG00000003753pabpc1b10090.282ENSPMEG00000001334pabpc1a10089.342Poecilia_mexicana
ENSXMAG00000003753pabpc1b10099.527ENSPREG00000010911pabpc1b10099.527Poecilia_reticulata
ENSXMAG00000003753pabpc1b9597.561ENSPREG00000019595pabpc1a10090.909Poecilia_reticulata
ENSXMAG00000003753pabpc1b8979.592ENSPPYG00000020468-9879.592Pongo_abelii
ENSXMAG00000003753pabpc1b8979.592ENSPCAG00000005308-9879.592Procavia_capensis
ENSXMAG00000003753pabpc1b8980.102ENSPCOG00000026349-9880.102Propithecus_coquereli
ENSXMAG00000003753pabpc1b8980.000ENSPVAG00000016117-9880.000Pteropus_vampyrus
ENSXMAG00000003753pabpc1b10090.125ENSPNYG00000005192pabpc1a10089.969Pundamilia_nyererei
ENSXMAG00000003753pabpc1b10094.006ENSPNYG00000012578pabpc1b10094.006Pundamilia_nyererei
ENSXMAG00000003753pabpc1b10090.094ENSPNAG00000028408pabpc1a10089.465Pygocentrus_nattereri
ENSXMAG00000003753pabpc1b10093.071ENSPNAG00000024626pabpc1b10092.598Pygocentrus_nattereri
ENSXMAG00000003753pabpc1b8979.592ENSRBIG00000027173-9879.592Rhinopithecus_bieti
ENSXMAG00000003753pabpc1b9991.017ENSRBIG00000028738-9591.017Rhinopithecus_bieti
ENSXMAG00000003753pabpc1b8979.592ENSRROG00000017404-9879.592Rhinopithecus_roxellana
ENSXMAG00000003753pabpc1b8976.164ENSSHAG00000000511-10063.505Sarcophilus_harrisii
ENSXMAG00000003753pabpc1b10093.691ENSSFOG00015002752-10093.691Scleropages_formosus
ENSXMAG00000003753pabpc1b8979.769ENSSFOG00015019668-9179.769Scleropages_formosus
ENSXMAG00000003753pabpc1b10091.024ENSSFOG00015006662pabpc1a10091.024Scleropages_formosus
ENSXMAG00000003753pabpc1b10090.125ENSSMAG00000010803pabpc1a10089.969Scophthalmus_maximus
ENSXMAG00000003753pabpc1b10094.322ENSSMAG00000006869pabpc1b10094.322Scophthalmus_maximus
ENSXMAG00000003753pabpc1b10093.375ENSSDUG00000011965pabpc1b10093.375Seriola_dumerili
ENSXMAG00000003753pabpc1b10089.969ENSSDUG00000006675pabpc1a10089.969Seriola_dumerili
ENSXMAG00000003753pabpc1b10094.992ENSSLDG00000014156pabpc1b10094.992Seriola_lalandi_dorsalis
ENSXMAG00000003753pabpc1b10089.969ENSSLDG00000011661pabpc1a10089.969Seriola_lalandi_dorsalis
ENSXMAG00000003753pabpc1b10090.439ENSSPAG00000014453-10090.282Stegastes_partitus
ENSXMAG00000003753pabpc1b10095.899ENSSPAG00000019265pabpc1b10095.899Stegastes_partitus
ENSXMAG00000003753pabpc1b8979.592ENSSSCG00000036336-9879.592Sus_scrofa
ENSXMAG00000003753pabpc1b8979.592ENSSSCG00000032167-9879.592Sus_scrofa
ENSXMAG00000003753pabpc1b10089.498ENSTRUG00000011577-10089.498Takifugu_rubripes
ENSXMAG00000003753pabpc1b10091.024ENSTRUG00000003767-10090.394Takifugu_rubripes
ENSXMAG00000003753pabpc1b10091.066ENSTNIG00000009153pabpc1b10090.596Tetraodon_nigroviridis
ENSXMAG00000003753pabpc1b10086.553ENSTNIG00000013307pabpc1a10086.553Tetraodon_nigroviridis
ENSXMAG00000003753pabpc1b8979.592ENSTTRG00000013181-9879.592Tursiops_truncatus
ENSXMAG00000003753pabpc1b8979.592ENSUAMG00000008089-9879.592Ursus_americanus
ENSXMAG00000003753pabpc1b9168.665ENSUMAG00000023926-9068.611Ursus_maritimus
ENSXMAG00000003753pabpc1b8979.592ENSUMAG00000003364-9879.592Ursus_maritimus
ENSXMAG00000003753pabpc1b9078.894ENSVVUG00000015892-9778.894Vulpes_vulpes
ENSXMAG00000003753pabpc1b9945.946ENSXETG00000015439-10045.843Xenopus_tropicalis
ENSXMAG00000003753pabpc1b10092.902ENSXCOG00000019901pabpc1b10092.902Xiphophorus_couchianus
ENSXMAG00000003753pabpc1b9294.823ENSXCOG00000017066pabpc1a10085.804Xiphophorus_couchianus
ENSXMAG00000003753pabpc1b10090.125ENSXMAG00000002555pabpc1a10090.125Xiphophorus_maculatus

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