EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000003922 (Gene tree)
Gene ID: 102226605
Gene Symbol: ercc2
Alias: XPD|zgc:56365
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15847 bases
Position: chr18:4531556-4547402
Accession: 102226605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000003957	ResIII	PF04851.15	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000026846	-	3675	XM_023350845	ENSXMAP00000033417	760 (aa)	XP_023206613	UPI000C6EA7BD
ENSXMAT00000003962	-	1968	-	ENSXMAP00000003957	655 (aa)	-	M3ZP14

Gene Model

Click here to download ENSXMAG00000003922's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03022	Basal transcription factors	KEGG
xma03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000003922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000003922	ercc2	99	81.667	ENSG00000104884	ERCC2	99	81.095	Homo_sapiens
ENSXMAG00000003922	ercc2	97	92.620	ENSAPOG00000000375	ercc2	100	92.620	Acanthochromis_polyacanthus
ENSXMAG00000003922	ercc2	99	92.647	ENSACIG00000008002	ercc2	99	92.647	Amphilophus_citrinellus
ENSXMAG00000003922	ercc2	97	90.855	ENSAOCG00000016153	ercc2	100	90.855	Amphiprion_ocellaris
ENSXMAG00000003922	ercc2	97	90.705	ENSAPEG00000016712	ercc2	100	90.705	Amphiprion_percula
ENSXMAG00000003922	ercc2	100	92.669	ENSATEG00000005268	ercc2	100	92.669	Anabas_testudineus
ENSXMAG00000003922	ercc2	99	79.853	ENSANAG00000022694	ERCC2	99	79.736	Aotus_nancymaae
ENSXMAG00000003922	ercc2	97	92.922	ENSACLG00000017573	ercc2	100	92.922	Astatotilapia_calliptera
ENSXMAG00000003922	ercc2	97	89.759	ENSAMXG00000009052	ercc2	99	89.759	Astyanax_mexicanus
ENSXMAG00000003922	ercc2	99	80.000	ENSCJAG00000012716	ERCC2	99	79.883	Callithrix_jacchus
ENSXMAG00000003922	ercc2	99	80.560	ENSCAFG00020011390	ERCC2	99	80.560	Canis_lupus_dingo
ENSXMAG00000003922	ercc2	96	68.105	ENSTSYG00000026723	ERCC2	98	68.105	Carlito_syrichta
ENSXMAG00000003922	ercc2	99	78.216	ENSCCAG00000019831	ERCC2	99	78.216	Cebus_capucinus
ENSXMAG00000003922	ercc2	91	40.678	ENSCSAG00000005928	BRIP1	50	40.678	Chlorocebus_sabaeus
ENSXMAG00000003922	ercc2	91	40.678	ENSCANG00000032026	BRIP1	50	40.678	Colobus_angolensis_palliatus
ENSXMAG00000003922	ercc2	99	80.147	ENSCANG00000040683	ERCC2	99	80.029	Colobus_angolensis_palliatus
ENSXMAG00000003922	ercc2	97	86.316	ENSCSEG00000006041	ercc2	100	86.316	Cynoglossus_semilaevis
ENSXMAG00000003922	ercc2	99	78.056	ENSEASG00005013856	ERCC2	99	78.056	Equus_asinus_asinus
ENSXMAG00000003922	ercc2	97	88.404	ENSELUG00000018055	ercc2	99	88.404	Esox_lucius
ENSXMAG00000003922	ercc2	99	80.441	ENSFCAG00000002679	ERCC2	99	80.323	Felis_catus
ENSXMAG00000003922	ercc2	100	93.402	ENSFHEG00000000072	ercc2	100	93.402	Fundulus_heteroclitus
ENSXMAG00000003922	ercc2	99	79.972	ENSGAGG00000009493	ERCC2	99	79.972	Gopherus_agassizii
ENSXMAG00000003922	ercc2	99	80.147	ENSGGOG00000015842	ERCC2	99	80.029	Gorilla_gorilla
ENSXMAG00000003922	ercc2	97	92.066	ENSHBUG00000002187	ercc2	100	92.066	Haplochromis_burtoni
ENSXMAG00000003922	ercc2	100	90.323	ENSLBEG00000010573	ercc2	92	90.323	Labrus_bergylta
ENSXMAG00000003922	ercc2	99	80.147	ENSMFAG00000037898	ERCC2	99	80.029	Macaca_fascicularis
ENSXMAG00000003922	ercc2	99	80.147	ENSMMUG00000014419	ERCC2	99	80.029	Macaca_mulatta
ENSXMAG00000003922	ercc2	82	40.678	ENSMNEG00000040728	BRIP1	57	40.678	Macaca_nemestrina
ENSXMAG00000003922	ercc2	99	80.147	ENSMNEG00000042641	ERCC2	99	80.029	Macaca_nemestrina
ENSXMAG00000003922	ercc2	99	80.118	ENSMLEG00000043492	ERCC2	99	80.000	Mandrillus_leucophaeus
ENSXMAG00000003922	ercc2	99	92.353	ENSMAMG00000016724	ercc2	99	92.353	Mastacembelus_armatus
ENSXMAG00000003922	ercc2	97	92.932	ENSMZEG00005024441	ercc2	100	92.932	Maylandia_zebra
ENSXMAG00000003922	ercc2	99	79.853	ENSMICG00000000635	ERCC2	99	79.736	Microcebus_murinus
ENSXMAG00000003922	ercc2	99	86.912	ENSMMOG00000005162	ercc2	99	86.912	Mola_mola
ENSXMAG00000003922	ercc2	99	91.324	ENSMALG00000005990	ercc2	99	91.324	Monopterus_albus
ENSXMAG00000003922	ercc2	99	81.176	MGP_CAROLIEiJ_G0029287	Ercc2	99	81.176	Mus_caroli
ENSXMAG00000003922	ercc2	99	81.176	ENSMUSG00000030400	Ercc2	99	81.176	Mus_musculus
ENSXMAG00000003922	ercc2	99	81.176	MGP_PahariEiJ_G0021147	Ercc2	99	81.176	Mus_pahari
ENSXMAG00000003922	ercc2	99	81.029	MGP_SPRETEiJ_G0030371	Ercc2	99	81.029	Mus_spretus
ENSXMAG00000003922	ercc2	99	80.147	ENSPPAG00000044005	ERCC2	99	80.029	Pan_paniscus
ENSXMAG00000003922	ercc2	99	75.847	ENSPPRG00000000507	ERCC2	99	75.994	Panthera_pardus
ENSXMAG00000003922	ercc2	99	80.147	ENSPTRG00000011149	ERCC2	99	80.029	Pan_troglodytes
ENSXMAG00000003922	ercc2	99	80.118	ENSPANG00000032195	ERCC2	99	80.000	Papio_anubis
ENSXMAG00000003922	ercc2	91	40.678	ENSPANG00000022169	BRIP1	50	40.678	Papio_anubis
ENSXMAG00000003922	ercc2	99	85.022	ENSPKIG00000006883	ercc2	98	85.022	Paramormyrops_kingsleyae
ENSXMAG00000003922	ercc2	97	90.060	ENSPMGG00000000223	ercc2	99	90.060	Periophthalmus_magnuspinnatus
ENSXMAG00000003922	ercc2	100	95.161	ENSPLAG00000002626	ercc2	100	95.161	Poecilia_latipinna
ENSXMAG00000003922	ercc2	100	95.161	ENSPMEG00000002858	ercc2	100	95.161	Poecilia_mexicana
ENSXMAG00000003922	ercc2	100	99.695	ENSPREG00000019280	ercc2	100	99.695	Poecilia_reticulata
ENSXMAG00000003922	ercc2	97	92.204	ENSPNYG00000022007	ercc2	100	92.204	Pundamilia_nyererei
ENSXMAG00000003922	ercc2	97	89.157	ENSPNAG00000010434	ercc2	99	89.157	Pygocentrus_nattereri
ENSXMAG00000003922	ercc2	99	80.147	ENSRROG00000040423	ERCC2	99	80.029	Rhinopithecus_roxellana
ENSXMAG00000003922	ercc2	99	80.265	ENSSBOG00000030257	ERCC2	99	80.265	Saimiri_boliviensis_boliviensis
ENSXMAG00000003922	ercc2	97	85.373	ENSSMAG00000019720	ercc2	100	85.373	Scophthalmus_maximus
ENSXMAG00000003922	ercc2	97	91.729	ENSSDUG00000002397	ercc2	100	91.729	Seriola_dumerili
ENSXMAG00000003922	ercc2	97	91.880	ENSSLDG00000020353	ercc2	100	91.880	Seriola_lalandi_dorsalis
ENSXMAG00000003922	ercc2	99	92.206	ENSSPAG00000002074	ercc2	99	92.206	Stegastes_partitus
ENSXMAG00000003922	ercc2	99	89.706	ENSTRUG00000007303	ercc2	99	89.706	Takifugu_rubripes
ENSXMAG00000003922	ercc2	99	80.560	ENSUAMG00000019562	ERCC2	99	80.560	Ursus_americanus