EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000004293 (Gene tree)
Gene ID: 102223130
Gene Symbol: mrpl28
Alias: wu:fa96b11|zgc:110013
Full Name: mitochondrial ribosomal protein L28
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3091 bases
Position: chr18:23286058-23289148
Accession: 102223130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000004301	Ribosomal_L28	PF00830.19	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000004306	-	1299	XM_014470653	ENSXMAP00000004301	251 (aa)	XP_014326139	M3ZQ08

Gene Model

Click here to download ENSXMAG00000004293's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000004293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000004293	mrpl28	100	64.683	ENSG00000086504	MRPL28	100	68.349	Homo_sapiens
ENSXMAG00000004293	mrpl28	99	79.600	ENSAPOG00000016883	mrpl28	99	79.600	Acanthochromis_polyacanthus
ENSXMAG00000004293	mrpl28	100	64.683	ENSAMEG00000007031	MRPL28	98	64.683	Ailuropoda_melanoleuca
ENSXMAG00000004293	mrpl28	100	81.673	ENSACIG00000005641	mrpl28	100	81.673	Amphilophus_citrinellus
ENSXMAG00000004293	mrpl28	100	81.746	ENSAOCG00000024148	mrpl28	100	81.746	Amphiprion_ocellaris
ENSXMAG00000004293	mrpl28	100	82.072	ENSAPEG00000010705	mrpl28	100	82.072	Amphiprion_percula
ENSXMAG00000004293	mrpl28	100	78.088	ENSATEG00000013085	mrpl28	100	78.088	Anabas_testudineus
ENSXMAG00000004293	mrpl28	55	66.187	ENSAPLG00000006257	MRPL28	99	66.187	Anas_platyrhynchos
ENSXMAG00000004293	mrpl28	97	59.144	ENSACAG00000015301	MRPL28	98	59.144	Anolis_carolinensis
ENSXMAG00000004293	mrpl28	100	65.079	ENSANAG00000022423	MRPL28	98	65.079	Aotus_nancymaae
ENSXMAG00000004293	mrpl28	100	81.275	ENSACLG00000017376	mrpl28	100	81.275	Astatotilapia_calliptera
ENSXMAG00000004293	mrpl28	100	71.825	ENSAMXG00000001999	mrpl28	99	71.825	Astyanax_mexicanus
ENSXMAG00000004293	mrpl28	100	65.079	ENSBTAG00000016581	MRPL28	92	65.079	Bos_taurus
ENSXMAG00000004293	mrpl28	100	61.660	ENSCAFG00000019682	MRPL28	98	62.451	Canis_familiaris
ENSXMAG00000004293	mrpl28	100	62.698	ENSCAFG00020009225	MRPL28	98	62.698	Canis_lupus_dingo
ENSXMAG00000004293	mrpl28	100	64.286	ENSCHIG00000016968	MRPL28	98	64.286	Capra_hircus
ENSXMAG00000004293	mrpl28	91	62.719	ENSTSYG00000032509	MRPL28	90	63.470	Carlito_syrichta
ENSXMAG00000004293	mrpl28	62	64.744	ENSCAPG00000011681	MRPL28	96	64.744	Cavia_aperea
ENSXMAG00000004293	mrpl28	100	65.476	ENSCPOG00000007176	MRPL28	98	65.476	Cavia_porcellus
ENSXMAG00000004293	mrpl28	98	66.260	ENSCCAG00000030887	MRPL28	96	66.260	Cebus_capucinus
ENSXMAG00000004293	mrpl28	99	67.331	ENSCATG00000040016	MRPL28	98	67.331	Cercocebus_atys
ENSXMAG00000004293	mrpl28	100	64.683	ENSCLAG00000014858	MRPL28	98	64.683	Chinchilla_lanigera
ENSXMAG00000004293	mrpl28	100	66.270	ENSCSAG00000012838	MRPL28	98	66.270	Chlorocebus_sabaeus
ENSXMAG00000004293	mrpl28	97	73.878	ENSCPBG00000026390	MRPL28	97	73.878	Chrysemys_picta_bellii
ENSXMAG00000004293	mrpl28	96	44.223	ENSCING00000023726	-	94	44.223	Ciona_intestinalis
ENSXMAG00000004293	mrpl28	90	43.644	ENSCSAVG00000003761	-	83	43.644	Ciona_savignyi
ENSXMAG00000004293	mrpl28	100	65.079	ENSCANG00000033941	MRPL28	98	65.079	Colobus_angolensis_palliatus
ENSXMAG00000004293	mrpl28	100	66.667	ENSCGRG00001012825	Mrpl28	98	66.667	Cricetulus_griseus_chok1gshd
ENSXMAG00000004293	mrpl28	100	66.667	ENSCGRG00000014549	Mrpl28	98	66.667	Cricetulus_griseus_crigri
ENSXMAG00000004293	mrpl28	100	78.486	ENSCSEG00000008095	mrpl28	100	78.486	Cynoglossus_semilaevis
ENSXMAG00000004293	mrpl28	100	85.657	ENSCVAG00000005123	mrpl28	100	85.657	Cyprinodon_variegatus
ENSXMAG00000004293	mrpl28	100	72.619	ENSDARG00000057805	mrpl28	100	72.619	Danio_rerio
ENSXMAG00000004293	mrpl28	62	65.806	ENSDORG00000024147	Mrpl28	97	65.806	Dipodomys_ordii
ENSXMAG00000004293	mrpl28	96	65.702	ENSEBUG00000004106	mrpl28	96	65.702	Eptatretus_burgeri
ENSXMAG00000004293	mrpl28	99	65.737	ENSEASG00005018175	MRPL28	97	65.737	Equus_asinus_asinus
ENSXMAG00000004293	mrpl28	99	65.339	ENSECAG00000022663	MRPL28	97	65.339	Equus_caballus
ENSXMAG00000004293	mrpl28	99	65.462	ENSEEUG00000006626	MRPL28	90	65.462	Erinaceus_europaeus
ENSXMAG00000004293	mrpl28	100	78.968	ENSELUG00000014104	mrpl28	100	78.968	Esox_lucius
ENSXMAG00000004293	mrpl28	100	64.683	ENSFCAG00000041050	MRPL28	98	64.683	Felis_catus
ENSXMAG00000004293	mrpl28	57	67.133	ENSFALG00000004103	MRPL28	93	67.133	Ficedula_albicollis
ENSXMAG00000004293	mrpl28	100	65.079	ENSFDAG00000011002	MRPL28	98	65.079	Fukomys_damarensis
ENSXMAG00000004293	mrpl28	100	87.302	ENSFHEG00000006545	mrpl28	100	87.302	Fundulus_heteroclitus
ENSXMAG00000004293	mrpl28	100	80.080	ENSGMOG00000010597	mrpl28	98	80.080	Gadus_morhua
ENSXMAG00000004293	mrpl28	96	63.374	ENSGALG00000007473	MRPL28	97	63.374	Gallus_gallus
ENSXMAG00000004293	mrpl28	99	94.800	ENSGAFG00000012123	mrpl28	99	94.800	Gambusia_affinis
ENSXMAG00000004293	mrpl28	100	78.088	ENSGACG00000009641	mrpl28	98	78.088	Gasterosteus_aculeatus
ENSXMAG00000004293	mrpl28	97	72.245	ENSGAGG00000023391	MRPL28	97	72.245	Gopherus_agassizii
ENSXMAG00000004293	mrpl28	100	65.079	ENSGGOG00000006668	MRPL28	98	65.079	Gorilla_gorilla
ENSXMAG00000004293	mrpl28	88	82.727	ENSHBUG00000002357	mrpl28	94	82.727	Haplochromis_burtoni
ENSXMAG00000004293	mrpl28	100	65.476	ENSHGLG00000003807	MRPL28	98	65.476	Heterocephalus_glaber_female
ENSXMAG00000004293	mrpl28	100	65.476	ENSHGLG00100012704	MRPL28	98	65.476	Heterocephalus_glaber_male
ENSXMAG00000004293	mrpl28	100	82.470	ENSHCOG00000000219	mrpl28	100	82.470	Hippocampus_comes
ENSXMAG00000004293	mrpl28	100	74.603	ENSIPUG00000015984	mrpl28	99	74.603	Ictalurus_punctatus
ENSXMAG00000004293	mrpl28	99	65.863	ENSSTOG00000012316	MRPL28	95	65.863	Ictidomys_tridecemlineatus
ENSXMAG00000004293	mrpl28	100	65.476	ENSJJAG00000008947	Mrpl28	98	65.476	Jaculus_jaculus
ENSXMAG00000004293	mrpl28	100	84.064	ENSKMAG00000021277	mrpl28	100	84.064	Kryptolebias_marmoratus
ENSXMAG00000004293	mrpl28	100	71.654	ENSLBEG00000020499	mrpl28	100	71.654	Labrus_bergylta
ENSXMAG00000004293	mrpl28	100	60.227	ENSLACG00000009989	MRPL28	99	60.227	Latimeria_chalumnae
ENSXMAG00000004293	mrpl28	100	73.810	ENSLOCG00000014850	mrpl28	99	73.810	Lepisosteus_oculatus
ENSXMAG00000004293	mrpl28	100	63.095	ENSLAFG00000010776	MRPL28	99	63.095	Loxodonta_africana
ENSXMAG00000004293	mrpl28	100	66.270	ENSMFAG00000006698	MRPL28	98	66.270	Macaca_fascicularis
ENSXMAG00000004293	mrpl28	100	66.270	ENSMMUG00000000609	MRPL28	98	66.270	Macaca_mulatta
ENSXMAG00000004293	mrpl28	99	66.534	ENSMNEG00000027279	MRPL28	98	66.534	Macaca_nemestrina
ENSXMAG00000004293	mrpl28	100	66.270	ENSMLEG00000002439	MRPL28	98	66.270	Mandrillus_leucophaeus
ENSXMAG00000004293	mrpl28	100	80.876	ENSMAMG00000011487	mrpl28	100	80.876	Mastacembelus_armatus
ENSXMAG00000004293	mrpl28	100	81.275	ENSMZEG00005016524	mrpl28	100	81.275	Maylandia_zebra
ENSXMAG00000004293	mrpl28	100	65.873	ENSMAUG00000003487	Mrpl28	98	65.873	Mesocricetus_auratus
ENSXMAG00000004293	mrpl28	91	67.686	ENSMICG00000031344	MRPL28	98	65.476	Microcebus_murinus
ENSXMAG00000004293	mrpl28	100	65.873	ENSMOCG00000014836	Mrpl28	98	65.873	Microtus_ochrogaster
ENSXMAG00000004293	mrpl28	100	78.486	ENSMMOG00000012412	mrpl28	100	78.486	Mola_mola
ENSXMAG00000004293	mrpl28	100	66.667	ENSMODG00000016666	MRPL28	99	66.667	Monodelphis_domestica
ENSXMAG00000004293	mrpl28	99	80.400	ENSMALG00000011904	mrpl28	100	80.400	Monopterus_albus
ENSXMAG00000004293	mrpl28	100	63.889	MGP_CAROLIEiJ_G0021273	Mrpl28	98	63.889	Mus_caroli
ENSXMAG00000004293	mrpl28	100	63.889	ENSMUSG00000024181	Mrpl28	98	63.889	Mus_musculus
ENSXMAG00000004293	mrpl28	99	63.745	MGP_PahariEiJ_G0023591	Mrpl28	98	63.745	Mus_pahari
ENSXMAG00000004293	mrpl28	100	63.889	MGP_SPRETEiJ_G0022184	Mrpl28	98	63.889	Mus_spretus
ENSXMAG00000004293	mrpl28	100	66.270	ENSMPUG00000016020	MRPL28	98	66.270	Mustela_putorius_furo
ENSXMAG00000004293	mrpl28	100	65.873	ENSMLUG00000010009	MRPL28	98	65.873	Myotis_lucifugus
ENSXMAG00000004293	mrpl28	88	69.231	ENSNGAG00000016312	Mrpl28	95	69.231	Nannospalax_galili
ENSXMAG00000004293	mrpl28	100	81.673	ENSNBRG00000005544	mrpl28	100	81.673	Neolamprologus_brichardi
ENSXMAG00000004293	mrpl28	100	65.476	ENSNLEG00000031011	MRPL28	98	65.476	Nomascus_leucogenys
ENSXMAG00000004293	mrpl28	100	67.857	ENSMEUG00000000407	MRPL28	98	67.857	Notamacropus_eugenii
ENSXMAG00000004293	mrpl28	100	65.079	ENSODEG00000015538	MRPL28	98	65.079	Octodon_degus
ENSXMAG00000004293	mrpl28	100	81.673	ENSONIG00000005965	mrpl28	100	81.673	Oreochromis_niloticus
ENSXMAG00000004293	mrpl28	100	86.454	ENSORLG00000006806	mrpl28	100	86.454	Oryzias_latipes
ENSXMAG00000004293	mrpl28	100	86.454	ENSORLG00020002937	mrpl28	100	86.454	Oryzias_latipes_hni
ENSXMAG00000004293	mrpl28	100	86.454	ENSORLG00015005123	mrpl28	100	86.454	Oryzias_latipes_hsok
ENSXMAG00000004293	mrpl28	100	84.861	ENSOMEG00000013553	mrpl28	100	84.861	Oryzias_melastigma
ENSXMAG00000004293	mrpl28	99	66.534	ENSOGAG00000014941	MRPL28	98	66.534	Otolemur_garnettii
ENSXMAG00000004293	mrpl28	100	64.286	ENSOARG00000011786	MRPL28	98	64.286	Ovis_aries
ENSXMAG00000004293	mrpl28	100	64.286	ENSPPAG00000034473	MRPL28	98	64.286	Pan_paniscus
ENSXMAG00000004293	mrpl28	100	64.683	ENSPPRG00000002937	MRPL28	98	64.683	Panthera_pardus
ENSXMAG00000004293	mrpl28	100	64.683	ENSPTIG00000017626	MRPL28	98	64.683	Panthera_tigris_altaica
ENSXMAG00000004293	mrpl28	100	64.683	ENSPTRG00000047553	MRPL28	98	64.683	Pan_troglodytes
ENSXMAG00000004293	mrpl28	100	66.667	ENSPANG00000018773	MRPL28	98	66.667	Papio_anubis
ENSXMAG00000004293	mrpl28	99	72.510	ENSPKIG00000010370	mrpl28	100	72.510	Paramormyrops_kingsleyae
ENSXMAG00000004293	mrpl28	96	72.541	ENSPSIG00000011177	MRPL28	99	72.541	Pelodiscus_sinensis
ENSXMAG00000004293	mrpl28	99	80.800	ENSPMGG00000014190	mrpl28	99	80.800	Periophthalmus_magnuspinnatus
ENSXMAG00000004293	mrpl28	100	66.270	ENSPEMG00000019054	Mrpl28	98	66.270	Peromyscus_maniculatus_bairdii
ENSXMAG00000004293	mrpl28	99	63.855	ENSPMAG00000004202	mrpl28	97	63.855	Petromyzon_marinus
ENSXMAG00000004293	mrpl28	100	67.063	ENSPCIG00000000377	MRPL28	88	67.063	Phascolarctos_cinereus
ENSXMAG00000004293	mrpl28	100	93.625	ENSPFOG00000009485	mrpl28	100	93.625	Poecilia_formosa
ENSXMAG00000004293	mrpl28	100	94.024	ENSPLAG00000020059	mrpl28	100	94.024	Poecilia_latipinna
ENSXMAG00000004293	mrpl28	100	94.821	ENSPMEG00000012919	mrpl28	100	94.821	Poecilia_mexicana
ENSXMAG00000004293	mrpl28	100	94.422	ENSPREG00000022968	mrpl28	100	94.422	Poecilia_reticulata
ENSXMAG00000004293	mrpl28	88	68.778	ENSPPYG00000006906	MRPL28	100	68.778	Pongo_abelii
ENSXMAG00000004293	mrpl28	100	64.286	ENSPCAG00000011480	MRPL28	98	64.286	Procavia_capensis
ENSXMAG00000004293	mrpl28	100	64.683	ENSPCOG00000021895	MRPL28	98	64.683	Propithecus_coquereli
ENSXMAG00000004293	mrpl28	100	55.556	ENSPVAG00000000551	MRPL28	98	55.556	Pteropus_vampyrus
ENSXMAG00000004293	mrpl28	88	82.273	ENSPNYG00000005347	mrpl28	94	82.273	Pundamilia_nyererei
ENSXMAG00000004293	mrpl28	100	72.222	ENSPNAG00000009296	mrpl28	99	72.222	Pygocentrus_nattereri
ENSXMAG00000004293	mrpl28	100	63.492	ENSRNOG00000042720	Mrpl28	98	63.492	Rattus_norvegicus
ENSXMAG00000004293	mrpl28	100	65.873	ENSRBIG00000029953	MRPL28	98	65.873	Rhinopithecus_bieti
ENSXMAG00000004293	mrpl28	100	65.476	ENSRROG00000042756	MRPL28	98	65.476	Rhinopithecus_roxellana
ENSXMAG00000004293	mrpl28	99	64.659	ENSSBOG00000019789	MRPL28	98	64.659	Saimiri_boliviensis_boliviensis
ENSXMAG00000004293	mrpl28	100	67.857	ENSSHAG00000007606	MRPL28	99	67.857	Sarcophilus_harrisii
ENSXMAG00000004293	mrpl28	100	75.000	ENSSFOG00015006866	mrpl28	100	75.000	Scleropages_formosus
ENSXMAG00000004293	mrpl28	100	79.681	ENSSMAG00000013912	mrpl28	100	79.681	Scophthalmus_maximus
ENSXMAG00000004293	mrpl28	99	82.800	ENSSDUG00000005764	mrpl28	99	82.800	Seriola_dumerili
ENSXMAG00000004293	mrpl28	99	81.600	ENSSLDG00000000409	mrpl28	99	81.600	Seriola_lalandi_dorsalis
ENSXMAG00000004293	mrpl28	59	62.162	ENSSARG00000006277	-	98	62.162	Sorex_araneus
ENSXMAG00000004293	mrpl28	100	68.254	ENSSPUG00000015322	MRPL28	99	68.254	Sphenodon_punctatus
ENSXMAG00000004293	mrpl28	100	81.275	ENSSPAG00000011153	mrpl28	100	81.275	Stegastes_partitus
ENSXMAG00000004293	mrpl28	100	63.095	ENSSSCG00000007984	MRPL28	98	63.095	Sus_scrofa
ENSXMAG00000004293	mrpl28	100	81.673	ENSTRUG00000019877	mrpl28	100	81.673	Takifugu_rubripes
ENSXMAG00000004293	mrpl28	100	80.478	ENSTNIG00000007746	mrpl28	100	80.478	Tetraodon_nigroviridis
ENSXMAG00000004293	mrpl28	94	69.167	ENSTNIG00000002347	-	100	69.167	Tetraodon_nigroviridis
ENSXMAG00000004293	mrpl28	50	70.400	ENSTTRG00000009128	-	78	70.400	Tursiops_truncatus
ENSXMAG00000004293	mrpl28	100	65.079	ENSUAMG00000015724	MRPL28	94	65.079	Ursus_americanus
ENSXMAG00000004293	mrpl28	100	65.476	ENSUMAG00000021029	MRPL28	98	65.476	Ursus_maritimus
ENSXMAG00000004293	mrpl28	61	59.302	ENSVVUG00000013414	MRPL28	61	59.302	Vulpes_vulpes
ENSXMAG00000004293	mrpl28	100	66.270	ENSXETG00000011564	mrpl28	99	66.270	Xenopus_tropicalis
ENSXMAG00000004293	mrpl28	100	99.602	ENSXCOG00000012655	mrpl28	100	99.602	Xiphophorus_couchianus