EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000004359 (Gene tree)
Gene ID: 102222605
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 28085 bases
Position: chr15:13187748-13215832
Accession: 102222605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000004396	GTP_EFTU	PF00009.27	1.2e-47	1	1
ENSXMAP00000004396	MMR_HSR1	PF01926.23	3.9e-06	1	1
ENSXMAP00000004396	GTP_EFTU_D2	PF03144.25	1.4e-08	1	1
ENSXMAP00000004396	GTP_EFTU_D3	PF03143.17	5.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000040747	-	5532	XM_023347311	ENSXMAP00000029070	643 (aa)	XP_023203079	UPI000C6EBC1D
ENSXMAT00000004401	-	4807	XM_014469199	ENSXMAP00000004396	702 (aa)	XP_014324685	M3ZQA3

Gene Model

Click here to download ENSXMAG00000004359's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000004359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000004359	hbs1l	100	72.624	ENSG00000112339	HBS1L	95	89.130	Homo_sapiens
ENSXMAG00000004359	hbs1l	81	94.370	ENSAPOG00000013169	hbs1l	91	94.370	Acanthochromis_polyacanthus
ENSXMAG00000004359	hbs1l	99	72.262	ENSAMEG00000009749	HBS1L	99	71.813	Ailuropoda_melanoleuca
ENSXMAG00000004359	hbs1l	76	89.758	ENSACIG00000017087	hbs1l	91	89.758	Amphilophus_citrinellus
ENSXMAG00000004359	hbs1l	100	89.758	ENSAPEG00000008320	hbs1l	100	89.758	Amphiprion_percula
ENSXMAG00000004359	hbs1l	100	88.210	ENSATEG00000004459	hbs1l	100	88.210	Anabas_testudineus
ENSXMAG00000004359	hbs1l	98	70.072	ENSAPLG00000007791	HBS1L	100	69.496	Anas_platyrhynchos
ENSXMAG00000004359	hbs1l	100	71.206	ENSACAG00000010120	HBS1L	100	71.206	Anolis_carolinensis
ENSXMAG00000004359	hbs1l	100	72.380	ENSANAG00000038076	HBS1L	95	89.130	Aotus_nancymaae
ENSXMAG00000004359	hbs1l	100	88.051	ENSACLG00000010469	hbs1l	100	88.051	Astatotilapia_calliptera
ENSXMAG00000004359	hbs1l	100	78.561	ENSAMXG00000004260	hbs1l	97	84.888	Astyanax_mexicanus
ENSXMAG00000004359	hbs1l	100	73.088	ENSBTAG00000020174	HBS1L	100	72.380	Bos_taurus
ENSXMAG00000004359	hbs1l	61	49.192	WBGene00010622	K07A12.4	72	49.074	Caenorhabditis_elegans
ENSXMAG00000004359	hbs1l	100	72.805	ENSCJAG00000007678	HBS1L	94	89.130	Callithrix_jacchus
ENSXMAG00000004359	hbs1l	100	71.489	ENSCAFG00000000226	HBS1L	100	71.186	Canis_familiaris
ENSXMAG00000004359	hbs1l	100	71.489	ENSCAFG00020021904	HBS1L	100	71.186	Canis_lupus_dingo
ENSXMAG00000004359	hbs1l	100	72.805	ENSCHIG00000010299	HBS1L	100	72.096	Capra_hircus
ENSXMAG00000004359	hbs1l	100	70.538	ENSTSYG00000007089	HBS1L	93	84.783	Carlito_syrichta
ENSXMAG00000004359	hbs1l	99	62.821	ENSCPOG00000007015	HBS1L	99	62.536	Cavia_porcellus
ENSXMAG00000004359	hbs1l	100	70.963	ENSCCAG00000033863	HBS1L	100	72.934	Cebus_capucinus
ENSXMAG00000004359	hbs1l	100	72.199	ENSCATG00000043042	HBS1L	93	89.130	Cercocebus_atys
ENSXMAG00000004359	hbs1l	100	70.963	ENSCLAG00000004937	HBS1L	100	70.680	Chinchilla_lanigera
ENSXMAG00000004359	hbs1l	100	71.813	ENSCSAG00000016791	HBS1L	100	71.813	Chlorocebus_sabaeus
ENSXMAG00000004359	hbs1l	97	56.706	ENSCHOG00000001852	HBS1L	99	55.844	Choloepus_hoffmanni
ENSXMAG00000004359	hbs1l	100	70.822	ENSCPBG00000017635	HBS1L	100	70.822	Chrysemys_picta_bellii
ENSXMAG00000004359	hbs1l	99	48.971	ENSCING00000005592	-	99	48.971	Ciona_intestinalis
ENSXMAG00000004359	hbs1l	97	60.825	ENSCSAVG00000002297	-	99	60.825	Ciona_savignyi
ENSXMAG00000004359	hbs1l	100	71.631	ENSCANG00000031208	HBS1L	93	89.130	Colobus_angolensis_palliatus
ENSXMAG00000004359	hbs1l	100	72.702	ENSCGRG00001024531	Hbs1l	100	71.994	Cricetulus_griseus_chok1gshd
ENSXMAG00000004359	hbs1l	100	72.702	ENSCGRG00000017361	Hbs1l	100	71.994	Cricetulus_griseus_crigri
ENSXMAG00000004359	hbs1l	99	85.917	ENSCSEG00000002794	hbs1l	94	85.491	Cynoglossus_semilaevis
ENSXMAG00000004359	hbs1l	100	92.023	ENSCVAG00000001462	hbs1l	100	92.023	Cyprinodon_variegatus
ENSXMAG00000004359	hbs1l	100	79.462	ENSDARG00000036778	hbs1l	100	79.462	Danio_rerio
ENSXMAG00000004359	hbs1l	100	71.591	ENSDORG00000005958	Hbs1l	100	71.591	Dipodomys_ordii
ENSXMAG00000004359	hbs1l	99	46.750	FBgn0042712	HBS1	100	47.149	Drosophila_melanogaster
ENSXMAG00000004359	hbs1l	100	67.422	ENSETEG00000000913	HBS1L	100	66.572	Echinops_telfairi
ENSXMAG00000004359	hbs1l	87	68.431	ENSEBUG00000010759	hbs1l	100	63.005	Eptatretus_burgeri
ENSXMAG00000004359	hbs1l	100	71.871	ENSEASG00005011148	HBS1L	100	70.986	Equus_asinus_asinus
ENSXMAG00000004359	hbs1l	100	71.589	ENSECAG00000004470	HBS1L	100	70.845	Equus_caballus
ENSXMAG00000004359	hbs1l	100	67.514	ENSEEUG00000013582	HBS1L	100	67.373	Erinaceus_europaeus
ENSXMAG00000004359	hbs1l	92	75.000	ENSELUG00000006444	hbs1l	96	75.000	Esox_lucius
ENSXMAG00000004359	hbs1l	100	72.199	ENSFCAG00000001810	HBS1L	95	89.130	Felis_catus
ENSXMAG00000004359	hbs1l	87	71.916	ENSFALG00000011898	HBS1L	100	71.916	Ficedula_albicollis
ENSXMAG00000004359	hbs1l	100	71.146	ENSFDAG00000011841	HBS1L	100	70.863	Fukomys_damarensis
ENSXMAG00000004359	hbs1l	100	93.305	ENSFHEG00000006942	hbs1l	100	93.305	Fundulus_heteroclitus
ENSXMAG00000004359	hbs1l	99	79.090	ENSGMOG00000011843	hbs1l	100	79.090	Gadus_morhua
ENSXMAG00000004359	hbs1l	100	71.711	ENSGALG00000013962	HBS1L	100	70.580	Gallus_gallus
ENSXMAG00000004359	hbs1l	100	98.575	ENSGAFG00000004157	hbs1l	100	98.575	Gambusia_affinis
ENSXMAG00000004359	hbs1l	99	83.357	ENSGACG00000011035	hbs1l	100	83.531	Gasterosteus_aculeatus
ENSXMAG00000004359	hbs1l	100	70.156	ENSGAGG00000002033	HBS1L	100	69.394	Gopherus_agassizii
ENSXMAG00000004359	hbs1l	77	74.401	ENSGGOG00000034956	-	93	83.333	Gorilla_gorilla
ENSXMAG00000004359	hbs1l	100	88.193	ENSHBUG00000013424	hbs1l	100	88.193	Haplochromis_burtoni
ENSXMAG00000004359	hbs1l	100	70.822	ENSHGLG00000000516	HBS1L	100	69.650	Heterocephalus_glaber_female
ENSXMAG00000004359	hbs1l	100	70.822	ENSHGLG00100003550	HBS1L	100	69.650	Heterocephalus_glaber_male
ENSXMAG00000004359	hbs1l	100	83.784	ENSHCOG00000007581	hbs1l	94	82.808	Hippocampus_comes
ENSXMAG00000004359	hbs1l	100	78.125	ENSIPUG00000010748	hbs1l	100	77.557	Ictalurus_punctatus
ENSXMAG00000004359	hbs1l	100	72.419	ENSSTOG00000007551	HBS1L	100	71.813	Ictidomys_tridecemlineatus
ENSXMAG00000004359	hbs1l	99	68.839	ENSJJAG00000017024	-	97	69.034	Jaculus_jaculus
ENSXMAG00000004359	hbs1l	100	55.949	ENSJJAG00000012660	-	100	55.028	Jaculus_jaculus
ENSXMAG00000004359	hbs1l	100	90.598	ENSKMAG00000012130	hbs1l	100	90.598	Kryptolebias_marmoratus
ENSXMAG00000004359	hbs1l	100	88.889	ENSLBEG00000002784	hbs1l	100	89.024	Labrus_bergylta
ENSXMAG00000004359	hbs1l	69	77.551	ENSLACG00000004528	HBS1L	99	77.551	Latimeria_chalumnae
ENSXMAG00000004359	hbs1l	100	74.471	ENSLOCG00000016221	hbs1l	100	74.471	Lepisosteus_oculatus
ENSXMAG00000004359	hbs1l	100	69.633	ENSLAFG00000007835	HBS1L	100	69.165	Loxodonta_africana
ENSXMAG00000004359	hbs1l	100	72.199	ENSMFAG00000003766	HBS1L	95	89.130	Macaca_fascicularis
ENSXMAG00000004359	hbs1l	89	78.269	ENSMMUG00000004802	HBS1L	95	89.130	Macaca_mulatta
ENSXMAG00000004359	hbs1l	100	72.199	ENSMNEG00000043942	HBS1L	95	89.130	Macaca_nemestrina
ENSXMAG00000004359	hbs1l	99	71.937	ENSMLEG00000043218	HBS1L	93	89.130	Mandrillus_leucophaeus
ENSXMAG00000004359	hbs1l	100	86.790	ENSMAMG00000016498	hbs1l	100	86.790	Mastacembelus_armatus
ENSXMAG00000004359	hbs1l	77	90.149	ENSMZEG00005024018	-	90	90.149	Maylandia_zebra
ENSXMAG00000004359	hbs1l	100	88.051	ENSMZEG00005015575	hbs1l	100	88.051	Maylandia_zebra
ENSXMAG00000004359	hbs1l	99	70.085	ENSMGAG00000013065	HBS1L	99	69.658	Meleagris_gallopavo
ENSXMAG00000004359	hbs1l	100	72.908	ENSMAUG00000001077	Hbs1l	100	72.199	Mesocricetus_auratus
ENSXMAG00000004359	hbs1l	99	67.898	ENSMICG00000001533	-	99	68.608	Microcebus_murinus
ENSXMAG00000004359	hbs1l	100	61.473	ENSMICG00000030043	-	96	81.183	Microcebus_murinus
ENSXMAG00000004359	hbs1l	100	72.277	ENSMOCG00000023038	Hbs1l	100	71.570	Microtus_ochrogaster
ENSXMAG00000004359	hbs1l	97	87.830	ENSMMOG00000015507	hbs1l	100	87.830	Mola_mola
ENSXMAG00000004359	hbs1l	100	70.605	ENSMODG00000017499	HBS1L	100	70.407	Monodelphis_domestica
ENSXMAG00000004359	hbs1l	100	89.047	ENSMALG00000010768	hbs1l	100	89.047	Monopterus_albus
ENSXMAG00000004359	hbs1l	100	72.535	MGP_CAROLIEiJ_G0015162	Hbs1l	100	72.254	Mus_caroli
ENSXMAG00000004359	hbs1l	100	72.394	ENSMUSG00000019977	Hbs1l	100	93.548	Mus_musculus
ENSXMAG00000004359	hbs1l	100	72.676	MGP_PahariEiJ_G0023782	Hbs1l	100	72.535	Mus_pahari
ENSXMAG00000004359	hbs1l	100	72.535	MGP_SPRETEiJ_G0015970	Hbs1l	100	72.394	Mus_spretus
ENSXMAG00000004359	hbs1l	100	72.380	ENSMPUG00000014810	HBS1L	100	71.955	Mustela_putorius_furo
ENSXMAG00000004359	hbs1l	100	71.955	ENSMLUG00000010618	HBS1L	100	71.530	Myotis_lucifugus
ENSXMAG00000004359	hbs1l	100	71.530	ENSNGAG00000015184	Hbs1l	100	71.388	Nannospalax_galili
ENSXMAG00000004359	hbs1l	100	87.767	ENSNBRG00000020095	hbs1l	100	87.767	Neolamprologus_brichardi
ENSXMAG00000004359	hbs1l	100	71.773	ENSNLEG00000014721	HBS1L	94	89.130	Nomascus_leucogenys
ENSXMAG00000004359	hbs1l	82	82.741	ENSMEUG00000003907	HBS1L	81	82.741	Notamacropus_eugenii
ENSXMAG00000004359	hbs1l	75	80.992	ENSOPRG00000013595	HBS1L	71	82.609	Ochotona_princeps
ENSXMAG00000004359	hbs1l	99	71.327	ENSODEG00000008959	HBS1L	100	71.014	Octodon_degus
ENSXMAG00000004359	hbs1l	100	87.909	ENSONIG00000000460	hbs1l	100	87.412	Oreochromis_niloticus
ENSXMAG00000004359	hbs1l	99	70.496	ENSOANG00000002684	-	99	70.538	Ornithorhynchus_anatinus
ENSXMAG00000004359	hbs1l	100	68.182	ENSOCUG00000011619	HBS1L	99	69.726	Oryctolagus_cuniculus
ENSXMAG00000004359	hbs1l	100	84.473	ENSORLG00000016559	hbs1l	100	84.473	Oryzias_latipes
ENSXMAG00000004359	hbs1l	100	84.330	ENSORLG00020003827	hbs1l	100	84.330	Oryzias_latipes_hni
ENSXMAG00000004359	hbs1l	100	84.330	ENSORLG00015023105	hbs1l	100	84.330	Oryzias_latipes_hsok
ENSXMAG00000004359	hbs1l	100	85.613	ENSOMEG00000016715	hbs1l	100	85.613	Oryzias_melastigma
ENSXMAG00000004359	hbs1l	100	72.199	ENSOGAG00000012604	HBS1L	100	72.199	Otolemur_garnettii
ENSXMAG00000004359	hbs1l	100	72.663	ENSOARG00000005671	-	100	71.955	Ovis_aries
ENSXMAG00000004359	hbs1l	99	73.011	ENSOARG00000014798	-	99	72.301	Ovis_aries
ENSXMAG00000004359	hbs1l	100	72.766	ENSPPAG00000029900	HBS1L	93	89.130	Pan_paniscus
ENSXMAG00000004359	hbs1l	100	72.199	ENSPPRG00000005285	HBS1L	95	89.130	Panthera_pardus
ENSXMAG00000004359	hbs1l	100	72.199	ENSPTIG00000015803	HBS1L	95	89.130	Panthera_tigris_altaica
ENSXMAG00000004359	hbs1l	100	72.766	ENSPTRG00000018630	HBS1L	93	89.130	Pan_troglodytes
ENSXMAG00000004359	hbs1l	100	71.915	ENSPANG00000007075	HBS1L	93	89.130	Papio_anubis
ENSXMAG00000004359	hbs1l	98	79.356	ENSPKIG00000023171	hbs1l	100	73.257	Paramormyrops_kingsleyae
ENSXMAG00000004359	hbs1l	86	68.464	ENSPSIG00000016467	HBS1L	97	68.464	Pelodiscus_sinensis
ENSXMAG00000004359	hbs1l	99	82.546	ENSPMGG00000018051	hbs1l	96	90.957	Periophthalmus_magnuspinnatus
ENSXMAG00000004359	hbs1l	100	72.560	ENSPEMG00000014369	Hbs1l	100	71.853	Peromyscus_maniculatus_bairdii
ENSXMAG00000004359	hbs1l	100	63.791	ENSPMAG00000002516	hbs1l	100	63.366	Petromyzon_marinus
ENSXMAG00000004359	hbs1l	100	97.443	ENSPFOG00000021764	hbs1l	100	97.443	Poecilia_formosa
ENSXMAG00000004359	hbs1l	100	97.863	ENSPLAG00000006193	hbs1l	100	97.863	Poecilia_latipinna
ENSXMAG00000004359	hbs1l	100	98.148	ENSPMEG00000000925	hbs1l	100	98.148	Poecilia_mexicana
ENSXMAG00000004359	hbs1l	100	97.721	ENSPREG00000011270	hbs1l	100	97.721	Poecilia_reticulata
ENSXMAG00000004359	hbs1l	100	72.057	ENSPPYG00000017027	HBS1L	100	72.057	Pongo_abelii
ENSXMAG00000004359	hbs1l	85	78.004	ENSPCAG00000007002	HBS1L	79	78.004	Procavia_capensis
ENSXMAG00000004359	hbs1l	84	77.757	ENSPVAG00000015229	HBS1L	85	77.419	Pteropus_vampyrus
ENSXMAG00000004359	hbs1l	100	87.909	ENSPNYG00000013360	hbs1l	100	87.909	Pundamilia_nyererei
ENSXMAG00000004359	hbs1l	100	78.843	ENSPNAG00000026721	hbs1l	100	78.843	Pygocentrus_nattereri
ENSXMAG00000004359	hbs1l	100	72.560	ENSRNOG00000014531	Hbs1l	100	72.419	Rattus_norvegicus
ENSXMAG00000004359	hbs1l	100	72.057	ENSRBIG00000004484	HBS1L	92	89.130	Rhinopithecus_bieti
ENSXMAG00000004359	hbs1l	100	71.915	ENSRROG00000026176	HBS1L	93	86.957	Rhinopithecus_roxellana
ENSXMAG00000004359	hbs1l	61	39.150	YKR084C	-	73	39.150	Saccharomyces_cerevisiae
ENSXMAG00000004359	hbs1l	100	64.589	ENSSBOG00000016930	-	98	79.255	Saimiri_boliviensis_boliviensis
ENSXMAG00000004359	hbs1l	100	72.238	ENSSBOG00000019696	-	93	89.130	Saimiri_boliviensis_boliviensis
ENSXMAG00000004359	hbs1l	100	70.538	ENSSHAG00000013509	HBS1L	100	70.538	Sarcophilus_harrisii
ENSXMAG00000004359	hbs1l	99	74.644	ENSSFOG00015017544	hbs1l	96	74.644	Scleropages_formosus
ENSXMAG00000004359	hbs1l	100	85.633	ENSSMAG00000010621	hbs1l	100	85.917	Scophthalmus_maximus
ENSXMAG00000004359	hbs1l	100	88.905	ENSSDUG00000012974	hbs1l	100	88.905	Seriola_dumerili
ENSXMAG00000004359	hbs1l	100	88.193	ENSSLDG00000004960	hbs1l	100	88.193	Seriola_lalandi_dorsalis
ENSXMAG00000004359	hbs1l	98	70.827	ENSSARG00000006747	HBS1L	100	71.118	Sorex_araneus
ENSXMAG00000004359	hbs1l	99	69.209	ENSSPUG00000012389	HBS1L	99	69.492	Sphenodon_punctatus
ENSXMAG00000004359	hbs1l	97	72.141	ENSSSCG00000004169	HBS1L	100	71.189	Sus_scrofa
ENSXMAG00000004359	hbs1l	99	70.071	ENSTGUG00000011507	HBS1L	99	70.071	Taeniopygia_guttata
ENSXMAG00000004359	hbs1l	99	83.903	ENSTRUG00000016128	hbs1l	89	94.595	Takifugu_rubripes
ENSXMAG00000004359	hbs1l	99	84.165	ENSTNIG00000016320	hbs1l	99	84.165	Tetraodon_nigroviridis
ENSXMAG00000004359	hbs1l	100	66.335	ENSTBEG00000009950	HBS1L	100	66.335	Tupaia_belangeri
ENSXMAG00000004359	hbs1l	99	71.915	ENSTTRG00000003715	HBS1L	99	71.348	Tursiops_truncatus
ENSXMAG00000004359	hbs1l	100	72.766	ENSUAMG00000001064	HBS1L	100	72.316	Ursus_americanus
ENSXMAG00000004359	hbs1l	100	72.624	ENSUMAG00000024395	HBS1L	100	89.189	Ursus_maritimus
ENSXMAG00000004359	hbs1l	88	79.705	ENSVPAG00000006280	HBS1L	86	89.130	Vicugna_pacos
ENSXMAG00000004359	hbs1l	100	71.773	ENSVVUG00000000295	HBS1L	100	71.469	Vulpes_vulpes
ENSXMAG00000004359	hbs1l	100	69.565	ENSXETG00000003726	hbs1l	100	70.042	Xenopus_tropicalis
ENSXMAG00000004359	hbs1l	99	96.291	ENSXCOG00000005323	hbs1l	100	96.291	Xiphophorus_couchianus