EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000004403 (Gene tree)
Gene ID: 102232101
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7493 bases
Position: chr6:3251176-3258668
Accession: 102232101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000004410	RRM_1	PF00076.22	4.4e-41	1	4
ENSXMAP00000004410	RRM_1	PF00076.22	4.4e-41	2	4
ENSXMAP00000004410	RRM_1	PF00076.22	4.4e-41	3	4
ENSXMAP00000004410	RRM_1	PF00076.22	4.4e-41	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000004415	-	2611	XM_023335144	ENSXMAP00000004410	488 (aa)	XP_023190912	M3ZQB7

Gene Model

Click here to download ENSXMAG00000004403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000004403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000004403	-	81	46.996	ENSACIG00000021941	-	93	44.118	Amphilophus_citrinellus
ENSXMAG00000004403	-	83	44.499	ENSACLG00000009613	-	95	44.499	Astatotilapia_calliptera
ENSXMAG00000004403	-	84	47.170	ENSCSEG00000017388	-	79	46.572	Cynoglossus_semilaevis
ENSXMAG00000004403	-	100	64.959	ENSFHEG00000017265	-	96	64.959	Fundulus_heteroclitus
ENSXMAG00000004403	-	79	40.513	ENSGMOG00000017831	-	97	40.561	Gadus_morhua
ENSXMAG00000004403	-	100	92.418	ENSGAFG00000018408	-	100	92.418	Gambusia_affinis
ENSXMAG00000004403	-	80	44.757	ENSHBUG00000006683	-	93	44.757	Haplochromis_burtoni
ENSXMAG00000004403	-	83	47.044	ENSHCOG00000020361	-	94	46.683	Hippocampus_comes
ENSXMAG00000004403	-	89	59.862	ENSKMAG00000003154	-	93	59.862	Kryptolebias_marmoratus
ENSXMAG00000004403	-	80	44.757	ENSMZEG00005005300	-	93	44.757	Maylandia_zebra
ENSXMAG00000004403	-	81	49.620	ENSMMOG00000018095	-	89	49.620	Mola_mola
ENSXMAG00000004403	-	93	47.671	ENSMALG00000006207	-	84	46.736	Monopterus_albus
ENSXMAG00000004403	-	83	46.192	ENSPMGG00000013705	-	94	46.437	Periophthalmus_magnuspinnatus
ENSXMAG00000004403	-	100	88.687	ENSPFOG00000016767	-	100	88.687	Poecilia_formosa
ENSXMAG00000004403	-	100	89.697	ENSPLAG00000000597	-	100	89.697	Poecilia_latipinna
ENSXMAG00000004403	-	100	90.204	ENSPMEG00000004046	-	100	90.204	Poecilia_mexicana
ENSXMAG00000004403	-	99	88.066	ENSPREG00000007170	-	95	88.066	Poecilia_reticulata
ENSXMAG00000004403	-	80	46.292	ENSPNYG00000000391	-	93	46.292	Pundamilia_nyererei
ENSXMAG00000004403	-	98	44.606	ENSTRUG00000023880	-	94	44.191	Takifugu_rubripes