EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000004657 (Gene tree)
Gene ID: 102220674
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15465 bases
Position: chr8:18042132-18057596
Accession: 102220674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000004670	AF-4	PF05110.13	1.8e-250	1	2
ENSXMAP00000004670	AF-4	PF05110.13	1.8e-250	2	2
ENSXMAP00000025331	AF-4	PF05110.13	9.9e-236	1	2
ENSXMAP00000025331	AF-4	PF05110.13	9.9e-236	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000004675	-	3738	XM_023338264	ENSXMAP00000004670	1105 (aa)	XP_023194032	M3ZR27
ENSXMAT00000024026	-	3696	-	ENSXMAP00000025331	1091 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000004657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000004657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000004657	-	56	39.394	ENSG00000155966	AFF2	80	30.641	Homo_sapiens
ENSXMAG00000004657	-	77	36.596	ENSG00000172493	AFF1	97	37.349	Homo_sapiens
ENSXMAG00000004657	-	60	43.846	ENSG00000072364	AFF4	71	33.698	Homo_sapiens
ENSXMAG00000004657	-	100	55.281	ENSAPOG00000002994	-	100	54.514	Acanthochromis_polyacanthus
ENSXMAG00000004657	-	84	45.498	ENSACIG00000021066	-	87	70.930	Amphilophus_citrinellus
ENSXMAG00000004657	-	100	55.413	ENSAOCG00000020283	-	100	54.220	Amphiprion_ocellaris
ENSXMAG00000004657	-	100	55.451	ENSAPEG00000018794	-	100	54.259	Amphiprion_percula
ENSXMAG00000004657	-	100	53.356	ENSATEG00000015552	-	99	52.936	Anabas_testudineus
ENSXMAG00000004657	-	50	49.580	ENSACAG00000010688	AFF2	50	49.580	Anolis_carolinensis
ENSXMAG00000004657	-	99	51.458	ENSACLG00000002905	-	99	51.372	Astatotilapia_calliptera
ENSXMAG00000004657	-	53	40.606	ENSBTAG00000009482	AFF4	70	34.474	Bos_taurus
ENSXMAG00000004657	-	66	36.336	ENSCJAG00000006047	AFF1	73	35.635	Callithrix_jacchus
ENSXMAG00000004657	-	53	40.120	ENSTSYG00000014713	AFF4	69	34.581	Carlito_syrichta
ENSXMAG00000004657	-	64	36.278	ENSCATG00000039501	AFF1	73	35.857	Cercocebus_atys
ENSXMAG00000004657	-	55	38.251	ENSCATG00000044510	AFF4	70	33.407	Cercocebus_atys
ENSXMAG00000004657	-	55	40.217	ENSCLAG00000013850	AFF4	69	34.715	Chinchilla_lanigera
ENSXMAG00000004657	-	73	37.170	ENSCPBG00000005382	AFF1	59	40.625	Chrysemys_picta_bellii
ENSXMAG00000004657	-	51	43.846	ENSCSEG00000017002	aff4	70	33.772	Cynoglossus_semilaevis
ENSXMAG00000004657	-	100	64.260	ENSCVAG00000015626	-	100	64.795	Cyprinodon_variegatus
ENSXMAG00000004657	-	53	41.212	ENSEASG00005018361	AFF4	70	35.217	Equus_asinus_asinus
ENSXMAG00000004657	-	99	38.387	ENSELUG00000019953	-	94	51.667	Esox_lucius
ENSXMAG00000004657	-	55	40.761	ENSFDAG00000005342	AFF4	70	35.319	Fukomys_damarensis
ENSXMAG00000004657	-	77	67.234	ENSFHEG00000003521	-	100	67.460	Fundulus_heteroclitus
ENSXMAG00000004657	-	60	56.522	ENSGALG00000043935	AFF1	82	33.929	Gallus_gallus
ENSXMAG00000004657	-	99	48.590	ENSGACG00000016333	-	99	55.435	Gasterosteus_aculeatus
ENSXMAG00000004657	-	77	35.870	ENSGGOG00000008497	AFF1	73	36.703	Gorilla_gorilla
ENSXMAG00000004657	-	100	51.157	ENSHBUG00000005828	-	100	51.071	Haplochromis_burtoni
ENSXMAG00000004657	-	99	41.667	ENSHCOG00000000539	-	99	40.838	Hippocampus_comes
ENSXMAG00000004657	-	100	55.279	ENSKMAG00000013113	-	100	55.451	Kryptolebias_marmoratus
ENSXMAG00000004657	-	100	50.547	ENSLBEG00000016928	-	99	49.369	Labrus_bergylta
ENSXMAG00000004657	-	51	44.697	ENSLOCG00000010610	aff4	70	33.830	Lepisosteus_oculatus
ENSXMAG00000004657	-	69	40.854	ENSLOCG00000004025	AFF1	99	33.772	Lepisosteus_oculatus
ENSXMAG00000004657	-	53	39.394	ENSLAFG00000018691	AFF2	88	30.137	Loxodonta_africana
ENSXMAG00000004657	-	55	39.674	ENSMFAG00000034615	AFF4	69	33.407	Macaca_fascicularis
ENSXMAG00000004657	-	55	50.847	ENSMFAG00000031640	AFF3	52	50.847	Macaca_fascicularis
ENSXMAG00000004657	-	64	36.278	ENSMFAG00000037700	AFF1	73	35.857	Macaca_fascicularis
ENSXMAG00000004657	-	64	35.962	ENSMMUG00000014076	AFF1	86	32.891	Macaca_mulatta
ENSXMAG00000004657	-	55	39.674	ENSMMUG00000015640	AFF4	75	34.848	Macaca_mulatta
ENSXMAG00000004657	-	55	39.674	ENSMNEG00000033381	AFF4	69	33.407	Macaca_nemestrina
ENSXMAG00000004657	-	64	35.647	ENSMNEG00000031536	AFF1	73	35.857	Macaca_nemestrina
ENSXMAG00000004657	-	64	36.278	ENSMLEG00000039099	AFF1	73	35.857	Mandrillus_leucophaeus
ENSXMAG00000004657	-	99	52.775	ENSMAMG00000016189	-	99	52.570	Mastacembelus_armatus
ENSXMAG00000004657	-	99	51.544	ENSMZEG00005020442	-	99	51.458	Maylandia_zebra
ENSXMAG00000004657	-	53	37.725	ENSMOCG00000003884	Aff4	70	34.257	Microtus_ochrogaster
ENSXMAG00000004657	-	56	48.571	ENSMMOG00000010019	aff2	52	48.571	Mola_mola
ENSXMAG00000004657	-	55	39.011	ENSMODG00000013842	AFF4	70	33.981	Monodelphis_domestica
ENSXMAG00000004657	-	100	52.658	ENSMALG00000002436	-	99	51.561	Monopterus_albus
ENSXMAG00000004657	-	53	38.922	MGP_CAROLIEiJ_G0016331	Aff4	69	34.889	Mus_caroli
ENSXMAG00000004657	-	55	50.847	ENSMUSG00000037138	Aff3	52	50.000	Mus_musculus
ENSXMAG00000004657	-	53	38.323	ENSMUSG00000049470	Aff4	77	39.362	Mus_musculus
ENSXMAG00000004657	-	53	38.323	MGP_SPRETEiJ_G0017175	Aff4	77	39.362	Mus_spretus
ENSXMAG00000004657	-	60	35.404	ENSOPRG00000017154	-	69	35.000	Ochotona_princeps
ENSXMAG00000004657	-	55	39.130	ENSODEG00000008137	AFF4	69	34.447	Octodon_degus
ENSXMAG00000004657	-	100	49.342	ENSONIG00000007636	-	100	48.766	Oreochromis_niloticus
ENSXMAG00000004657	-	54	40.000	ENSOCUG00000013635	AFF4	70	34.130	Oryctolagus_cuniculus
ENSXMAG00000004657	-	71	65.854	ENSORLG00000006428	-	99	65.854	Oryzias_latipes
ENSXMAG00000004657	-	85	65.854	ENSORLG00020003991	-	99	65.854	Oryzias_latipes_hni
ENSXMAG00000004657	-	85	65.854	ENSORLG00015009287	-	99	65.854	Oryzias_latipes_hsok
ENSXMAG00000004657	-	84	71.951	ENSOMEG00000005799	-	99	71.951	Oryzias_melastigma
ENSXMAG00000004657	-	59	59.677	ENSPTRG00000016255	AFF1	65	59.677	Pan_troglodytes
ENSXMAG00000004657	-	55	39.674	ENSPANG00000007039	AFF4	69	33.407	Papio_anubis
ENSXMAG00000004657	-	61	36.207	ENSPANG00000016722	AFF1	67	34.646	Papio_anubis
ENSXMAG00000004657	-	61	52.962	ENSPKIG00000007777	-	61	52.013	Paramormyrops_kingsleyae
ENSXMAG00000004657	-	73	36.341	ENSPSIG00000003759	AFF1	71	36.804	Pelodiscus_sinensis
ENSXMAG00000004657	-	53	39.394	ENSPEMG00000007995	Aff4	70	33.750	Peromyscus_maniculatus_bairdii
ENSXMAG00000004657	-	57	51.562	ENSPMAG00000007807	aff4	69	33.188	Petromyzon_marinus
ENSXMAG00000004657	-	100	89.308	ENSPFOG00000004581	-	100	89.218	Poecilia_formosa
ENSXMAG00000004657	-	50	46.667	ENSPLAG00000001837	aff4	50	46.667	Poecilia_latipinna
ENSXMAG00000004657	-	95	90.019	ENSPLAG00000012910	-	100	89.924	Poecilia_latipinna
ENSXMAG00000004657	-	66	89.073	ENSPMEG00000020100	-	98	88.935	Poecilia_mexicana
ENSXMAG00000004657	-	50	47.500	ENSPREG00000005287	aff4	50	47.500	Poecilia_reticulata
ENSXMAG00000004657	-	100	89.801	ENSPREG00000003514	-	100	90.253	Poecilia_reticulata
ENSXMAG00000004657	-	77	37.446	ENSPPYG00000014910	AFF1	72	37.029	Pongo_abelii
ENSXMAG00000004657	-	53	39.521	ENSPCOG00000023876	AFF4	69	33.991	Propithecus_coquereli
ENSXMAG00000004657	-	55	39.674	ENSRROG00000033812	AFF4	69	33.407	Rhinopithecus_roxellana
ENSXMAG00000004657	-	53	39.382	ENSSHAG00000009556	AFF2	85	30.945	Sarcophilus_harrisii
ENSXMAG00000004657	-	55	39.011	ENSSHAG00000013198	AFF4	70	34.459	Sarcophilus_harrisii
ENSXMAG00000004657	-	99	51.390	ENSSMAG00000007062	-	95	54.032	Scophthalmus_maximus
ENSXMAG00000004657	-	60	50.140	ENSSDUG00000023775	-	96	49.437	Seriola_dumerili
ENSXMAG00000004657	-	100	53.172	ENSSLDG00000006836	-	99	53.795	Seriola_lalandi_dorsalis
ENSXMAG00000004657	-	96	54.601	ENSSPAG00000003972	-	97	53.900	Stegastes_partitus
ENSXMAG00000004657	-	64	59.701	ENSSSCG00000023593	AFF1	54	59.701	Sus_scrofa
ENSXMAG00000004657	-	53	40.000	ENSSSCG00000014291	AFF4	70	34.474	Sus_scrofa
ENSXMAG00000004657	-	71	34.719	ENSTGUG00000002726	AFF1	82	34.719	Taeniopygia_guttata
ENSXMAG00000004657	-	99	48.270	ENSTRUG00000014005	-	99	48.523	Takifugu_rubripes
ENSXMAG00000004657	-	99	42.776	ENSTNIG00000007537	-	99	43.382	Tetraodon_nigroviridis
ENSXMAG00000004657	-	61	36.271	ENSTBEG00000007536	AFF1	71	33.645	Tupaia_belangeri
ENSXMAG00000004657	-	52	35.461	ENSTTRG00000014729	AFF4	70	34.889	Tursiops_truncatus
ENSXMAG00000004657	-	53	39.394	ENSUMAG00000009395	AFF2	51	38.403	Ursus_maritimus
ENSXMAG00000004657	-	53	39.521	ENSVPAG00000007247	AFF4	69	34.000	Vicugna_pacos
ENSXMAG00000004657	-	56	39.231	ENSXETG00000019630	aff2	50	38.462	Xenopus_tropicalis