EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000004867 (Gene tree)
Gene ID: 102235134
Gene Symbol: mrps18a
Alias: si:ch211-117l16.3|zgc:152724
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 5192 bases
Position: chr15:14009807-14014998
Accession: 102235134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000040256	Ribosomal_S18	PF01084.20	3.3e-16	1	1
ENSXMAP00000004881	Ribosomal_S18	PF01084.20	4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000004886	-	2527	XM_005800256	ENSXMAP00000004881	208 (aa)	XP_005800313	M3ZRN8
ENSXMAT00000032041	-	564	-	ENSXMAP00000040256	187 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000004867's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000004867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000004867	mrps18a	81	65.359	ENSG00000096080	MRPS18A	85	63.690	Homo_sapiens
ENSXMAG00000004867	mrps18a	82	64.535	ENSAMEG00000012117	MRPS18A	87	62.791	Ailuropoda_melanoleuca
ENSXMAG00000004867	mrps18a	100	82.692	ENSACIG00000017782	mrps18a	100	82.692	Amphilophus_citrinellus
ENSXMAG00000004867	mrps18a	66	74.453	ENSAOCG00000005723	mrps18a	81	74.453	Amphiprion_ocellaris
ENSXMAG00000004867	mrps18a	100	78.846	ENSAPEG00000006971	mrps18a	100	78.846	Amphiprion_percula
ENSXMAG00000004867	mrps18a	100	79.808	ENSATEG00000003132	mrps18a	100	79.808	Anabas_testudineus
ENSXMAG00000004867	mrps18a	80	73.333	ENSAPLG00000016280	MRPS18A	100	73.585	Anas_platyrhynchos
ENSXMAG00000004867	mrps18a	94	62.500	ENSACAG00000000642	MRPS18A	87	68.862	Anolis_carolinensis
ENSXMAG00000004867	mrps18a	81	64.706	ENSANAG00000030889	MRPS18A	85	63.095	Aotus_nancymaae
ENSXMAG00000004867	mrps18a	100	83.173	ENSACLG00000008170	mrps18a	100	83.173	Astatotilapia_calliptera
ENSXMAG00000004867	mrps18a	98	61.836	ENSAMXG00000036348	mrps18a	99	61.836	Astyanax_mexicanus
ENSXMAG00000004867	mrps18a	60	79.825	ENSAMXG00000036055	-	84	79.825	Astyanax_mexicanus
ENSXMAG00000004867	mrps18a	100	58.852	ENSBTAG00000025571	MRPS18A	100	57.416	Bos_taurus
ENSXMAG00000004867	mrps18a	100	57.416	ENSCJAG00000017382	MRPS18A	100	56.938	Callithrix_jacchus
ENSXMAG00000004867	mrps18a	81	64.706	ENSCAFG00000001928	MRPS18A	84	63.855	Canis_familiaris
ENSXMAG00000004867	mrps18a	81	64.706	ENSCAFG00020012064	MRPS18A	70	63.855	Canis_lupus_dingo
ENSXMAG00000004867	mrps18a	100	58.373	ENSCHIG00000013039	MRPS18A	100	56.938	Capra_hircus
ENSXMAG00000004867	mrps18a	82	65.116	ENSTSYG00000001390	MRPS18A	87	63.372	Carlito_syrichta
ENSXMAG00000004867	mrps18a	74	67.857	ENSCAPG00000016029	MRPS18A	87	65.714	Cavia_aperea
ENSXMAG00000004867	mrps18a	78	65.244	ENSCPOG00000022949	MRPS18A	83	63.415	Cavia_porcellus
ENSXMAG00000004867	mrps18a	79	65.541	ENSCCAG00000021108	MRPS18A	83	63.804	Cebus_capucinus
ENSXMAG00000004867	mrps18a	81	65.359	ENSCATG00000012963	MRPS18A	85	64.881	Cercocebus_atys
ENSXMAG00000004867	mrps18a	84	61.932	ENSCLAG00000012929	MRPS18A	89	60.227	Chinchilla_lanigera
ENSXMAG00000004867	mrps18a	81	65.359	ENSCSAG00000012127	MRPS18A	99	58.081	Chlorocebus_sabaeus
ENSXMAG00000004867	mrps18a	100	58.763	ENSCPBG00000025243	MRPS18A	100	58.763	Chrysemys_picta_bellii
ENSXMAG00000004867	mrps18a	83	35.802	ENSCING00000024771	-	82	38.415	Ciona_intestinalis
ENSXMAG00000004867	mrps18a	74	36.306	ENSCSAVG00000009539	-	87	36.306	Ciona_savignyi
ENSXMAG00000004867	mrps18a	79	66.892	ENSCANG00000039873	MRPS18A	83	66.258	Colobus_angolensis_palliatus
ENSXMAG00000004867	mrps18a	81	60.784	ENSCGRG00001017882	Mrps18a	90	58.333	Cricetulus_griseus_chok1gshd
ENSXMAG00000004867	mrps18a	79	49.091	ENSCGRG00000000079	Mrps18a	86	48.503	Cricetulus_griseus_crigri
ENSXMAG00000004867	mrps18a	100	75.481	ENSCSEG00000019650	mrps18a	100	73.206	Cynoglossus_semilaevis
ENSXMAG00000004867	mrps18a	100	87.981	ENSCVAG00000006511	mrps18a	100	87.981	Cyprinodon_variegatus
ENSXMAG00000004867	mrps18a	100	64.286	ENSDARG00000024465	mrps18a	100	66.190	Danio_rerio
ENSXMAG00000004867	mrps18a	81	66.013	ENSDNOG00000035755	MRPS18A	84	65.060	Dasypus_novemcinctus
ENSXMAG00000004867	mrps18a	81	66.013	ENSDORG00000014583	Mrps18a	85	64.286	Dipodomys_ordii
ENSXMAG00000004867	mrps18a	66	36.364	FBgn0051450	mRpS18A	75	38.655	Drosophila_melanogaster
ENSXMAG00000004867	mrps18a	79	54.839	ENSETEG00000014171	MRPS18A	100	54.839	Echinops_telfairi
ENSXMAG00000004867	mrps18a	68	71.094	ENSEASG00005003485	MRPS18A	56	65.584	Equus_asinus_asinus
ENSXMAG00000004867	mrps18a	68	70.312	ENSECAG00000004870	MRPS18A	54	68.243	Equus_caballus
ENSXMAG00000004867	mrps18a	100	72.381	ENSELUG00000005253	mrps18a	100	72.381	Esox_lucius
ENSXMAG00000004867	mrps18a	81	67.320	ENSFCAG00000036031	MRPS18A	84	66.265	Felis_catus
ENSXMAG00000004867	mrps18a	100	62.500	ENSFALG00000011356	MRPS18A	100	62.500	Ficedula_albicollis
ENSXMAG00000004867	mrps18a	99	52.551	ENSFDAG00000012875	MRPS18A	97	51.020	Fukomys_damarensis
ENSXMAG00000004867	mrps18a	100	88.942	ENSFHEG00000009014	mrps18a	100	88.942	Fundulus_heteroclitus
ENSXMAG00000004867	mrps18a	100	70.335	ENSGMOG00000012493	mrps18a	100	70.335	Gadus_morhua
ENSXMAG00000004867	mrps18a	75	63.014	ENSGALG00000010296	MRPS18A	100	63.014	Gallus_gallus
ENSXMAG00000004867	mrps18a	100	93.750	ENSGAFG00000005211	mrps18a	100	93.750	Gambusia_affinis
ENSXMAG00000004867	mrps18a	100	77.404	ENSGACG00000013370	mrps18a	100	77.404	Gasterosteus_aculeatus
ENSXMAG00000004867	mrps18a	81	70.199	ENSGAGG00000017954	MRPS18A	81	70.199	Gopherus_agassizii
ENSXMAG00000004867	mrps18a	81	65.359	ENSGGOG00000006303	-	85	63.690	Gorilla_gorilla
ENSXMAG00000004867	mrps18a	100	83.173	ENSHBUG00000014682	mrps18a	100	83.173	Haplochromis_burtoni
ENSXMAG00000004867	mrps18a	82	63.953	ENSHGLG00000014356	MRPS18A	87	62.209	Heterocephalus_glaber_female
ENSXMAG00000004867	mrps18a	82	63.953	ENSHGLG00100010988	MRPS18A	87	62.209	Heterocephalus_glaber_male
ENSXMAG00000004867	mrps18a	100	74.038	ENSHCOG00000000856	mrps18a	100	74.038	Hippocampus_comes
ENSXMAG00000004867	mrps18a	100	66.190	ENSIPUG00000017406	mrps18a	100	67.143	Ictalurus_punctatus
ENSXMAG00000004867	mrps18a	82	62.637	ENSSTOG00000004490	MRPS18A	88	60.989	Ictidomys_tridecemlineatus
ENSXMAG00000004867	mrps18a	81	66.013	ENSJJAG00000006567	Mrps18a	85	64.286	Jaculus_jaculus
ENSXMAG00000004867	mrps18a	100	81.731	ENSKMAG00000014910	mrps18a	100	81.731	Kryptolebias_marmoratus
ENSXMAG00000004867	mrps18a	100	80.288	ENSLBEG00000003391	mrps18a	99	80.288	Labrus_bergylta
ENSXMAG00000004867	mrps18a	100	53.846	ENSLACG00000022160	mrps18a	100	53.846	Latimeria_chalumnae
ENSXMAG00000004867	mrps18a	100	64.384	ENSLOCG00000016008	mrps18a	100	64.384	Lepisosteus_oculatus
ENSXMAG00000004867	mrps18a	85	62.570	ENSLAFG00000001168	MRPS18A	91	62.570	Loxodonta_africana
ENSXMAG00000004867	mrps18a	81	65.359	ENSMFAG00000038311	MRPS18A	99	58.081	Macaca_fascicularis
ENSXMAG00000004867	mrps18a	81	65.359	ENSMMUG00000014749	MRPS18A	99	58.081	Macaca_mulatta
ENSXMAG00000004867	mrps18a	95	59.091	ENSMNEG00000044642	MRPS18A	99	58.586	Macaca_nemestrina
ENSXMAG00000004867	mrps18a	81	65.359	ENSMLEG00000041828	MRPS18A	100	66.038	Mandrillus_leucophaeus
ENSXMAG00000004867	mrps18a	100	78.846	ENSMAMG00000015478	mrps18a	100	78.846	Mastacembelus_armatus
ENSXMAG00000004867	mrps18a	100	83.173	ENSMZEG00005014925	mrps18a	100	83.173	Maylandia_zebra
ENSXMAG00000004867	mrps18a	100	61.979	ENSMGAG00000010915	MRPS18A	100	61.979	Meleagris_gallopavo
ENSXMAG00000004867	mrps18a	81	66.667	ENSMICG00000005062	MRPS18A	85	66.667	Microcebus_murinus
ENSXMAG00000004867	mrps18a	100	56.383	ENSMOCG00000021207	-	85	64.286	Microtus_ochrogaster
ENSXMAG00000004867	mrps18a	81	62.745	ENSMOCG00000015168	-	88	59.524	Microtus_ochrogaster
ENSXMAG00000004867	mrps18a	100	80.769	ENSMMOG00000015248	mrps18a	100	80.769	Mola_mola
ENSXMAG00000004867	mrps18a	81	55.102	ENSMODG00000018952	MRPS18A	87	55.024	Monodelphis_domestica
ENSXMAG00000004867	mrps18a	100	82.212	ENSMALG00000017044	mrps18a	81	92.568	Monopterus_albus
ENSXMAG00000004867	mrps18a	84	63.924	MGP_CAROLIEiJ_G0021656	Mrps18a	85	63.095	Mus_caroli
ENSXMAG00000004867	mrps18a	95	58.101	ENSMUSG00000023967	Mrps18a	85	63.095	Mus_musculus
ENSXMAG00000004867	mrps18a	84	63.291	MGP_PahariEiJ_G0020648	Mrps18a	85	62.500	Mus_pahari
ENSXMAG00000004867	mrps18a	95	58.101	MGP_SPRETEiJ_G0022568	Mrps18a	85	63.095	Mus_spretus
ENSXMAG00000004867	mrps18a	100	57.360	ENSMPUG00000012868	MRPS18A	72	63.372	Mustela_putorius_furo
ENSXMAG00000004867	mrps18a	80	68.212	ENSMLUG00000017755	MRPS18A	83	67.485	Myotis_lucifugus
ENSXMAG00000004867	mrps18a	82	63.372	ENSNGAG00000020052	Mrps18a	89	61.047	Nannospalax_galili
ENSXMAG00000004867	mrps18a	100	84.135	ENSNBRG00000021152	mrps18a	100	84.135	Neolamprologus_brichardi
ENSXMAG00000004867	mrps18a	81	64.706	ENSNLEG00000003865	MRPS18A	85	63.095	Nomascus_leucogenys
ENSXMAG00000004867	mrps18a	98	46.899	ENSMEUG00000013986	MRPS18A	99	45.349	Notamacropus_eugenii
ENSXMAG00000004867	mrps18a	81	67.059	ENSOPRG00000007680	MRPS18A	70	62.500	Ochotona_princeps
ENSXMAG00000004867	mrps18a	100	59.330	ENSODEG00000015388	MRPS18A	100	57.895	Octodon_degus
ENSXMAG00000004867	mrps18a	100	84.135	ENSONIG00000000609	mrps18a	100	84.135	Oreochromis_niloticus
ENSXMAG00000004867	mrps18a	79	67.114	ENSOANG00000001955	MRPS18A	97	67.949	Ornithorhynchus_anatinus
ENSXMAG00000004867	mrps18a	81	62.745	ENSOCUG00000005544	MRPS18A	85	61.310	Oryctolagus_cuniculus
ENSXMAG00000004867	mrps18a	100	78.846	ENSORLG00000023864	mrps18a	100	78.846	Oryzias_latipes
ENSXMAG00000004867	mrps18a	100	78.846	ENSORLG00020002882	mrps18a	100	78.846	Oryzias_latipes_hni
ENSXMAG00000004867	mrps18a	100	78.365	ENSORLG00015022065	mrps18a	100	78.365	Oryzias_latipes_hsok
ENSXMAG00000004867	mrps18a	100	75.481	ENSOMEG00000018124	mrps18a	100	75.481	Oryzias_melastigma
ENSXMAG00000004867	mrps18a	81	67.320	ENSOGAG00000026551	MRPS18A	85	65.476	Otolemur_garnettii
ENSXMAG00000004867	mrps18a	100	58.373	ENSOARG00000008279	MRPS18A	100	56.938	Ovis_aries
ENSXMAG00000004867	mrps18a	81	65.359	ENSPPAG00000036291	MRPS18A	85	63.690	Pan_paniscus
ENSXMAG00000004867	mrps18a	81	66.667	ENSPPRG00000006429	MRPS18A	84	65.663	Panthera_pardus
ENSXMAG00000004867	mrps18a	81	67.320	ENSPTIG00000001653	MRPS18A	84	66.265	Panthera_tigris_altaica
ENSXMAG00000004867	mrps18a	81	65.359	ENSPTRG00000018209	MRPS18A	85	63.690	Pan_troglodytes
ENSXMAG00000004867	mrps18a	81	65.359	ENSPANG00000006967	MRPS18A	99	58.081	Papio_anubis
ENSXMAG00000004867	mrps18a	100	65.072	ENSPKIG00000012807	mrps18a	90	65.072	Paramormyrops_kingsleyae
ENSXMAG00000004867	mrps18a	77	71.951	ENSPSIG00000013672	MRPS18A	85	63.190	Pelodiscus_sinensis
ENSXMAG00000004867	mrps18a	100	70.051	ENSPMGG00000000493	mrps18a	100	70.051	Periophthalmus_magnuspinnatus
ENSXMAG00000004867	mrps18a	81	65.359	ENSPEMG00000000405	Mrps18a	85	63.095	Peromyscus_maniculatus_bairdii
ENSXMAG00000004867	mrps18a	94	61.364	ENSPMAG00000007012	mrps18a	97	67.598	Petromyzon_marinus
ENSXMAG00000004867	mrps18a	83	66.667	ENSPCIG00000024858	MRPS18A	88	64.943	Phascolarctos_cinereus
ENSXMAG00000004867	mrps18a	81	94.079	ENSPFOG00000009046	mrps18a	100	96.855	Poecilia_formosa
ENSXMAG00000004867	mrps18a	100	95.192	ENSPLAG00000011106	mrps18a	100	95.192	Poecilia_latipinna
ENSXMAG00000004867	mrps18a	100	94.712	ENSPMEG00000000736	mrps18a	100	94.712	Poecilia_mexicana
ENSXMAG00000004867	mrps18a	100	93.269	ENSPREG00000012172	mrps18a	95	93.269	Poecilia_reticulata
ENSXMAG00000004867	mrps18a	81	65.359	ENSPPYG00000017282	MRPS18A	85	63.690	Pongo_abelii
ENSXMAG00000004867	mrps18a	80	50.500	ENSPCAG00000004192	MRPS18A	99	51.942	Procavia_capensis
ENSXMAG00000004867	mrps18a	81	66.013	ENSPCOG00000014911	MRPS18A	85	64.286	Propithecus_coquereli
ENSXMAG00000004867	mrps18a	81	69.136	ENSPVAG00000002758	MRPS18A	69	63.014	Pteropus_vampyrus
ENSXMAG00000004867	mrps18a	100	82.692	ENSPNYG00000014753	mrps18a	100	82.692	Pundamilia_nyererei
ENSXMAG00000004867	mrps18a	100	67.773	ENSPNAG00000023462	mrps18a	100	67.773	Pygocentrus_nattereri
ENSXMAG00000004867	mrps18a	95	58.101	ENSRNOG00000019511	Mrps18a	85	63.095	Rattus_norvegicus
ENSXMAG00000004867	mrps18a	79	66.216	ENSRBIG00000028789	MRPS18A	83	65.644	Rhinopithecus_bieti
ENSXMAG00000004867	mrps18a	79	66.216	ENSRROG00000042368	-	83	65.644	Rhinopithecus_roxellana
ENSXMAG00000004867	mrps18a	80	64.238	ENSSBOG00000019943	MRPS18A	84	63.855	Saimiri_boliviensis_boliviensis
ENSXMAG00000004867	mrps18a	81	68.627	ENSSHAG00000015048	-	88	65.896	Sarcophilus_harrisii
ENSXMAG00000004867	mrps18a	100	66.507	ENSSFOG00015005628	mrps18a	100	66.507	Scleropages_formosus
ENSXMAG00000004867	mrps18a	100	78.365	ENSSMAG00000009353	mrps18a	100	78.365	Scophthalmus_maximus
ENSXMAG00000004867	mrps18a	100	82.888	ENSSDUG00000011655	mrps18a	100	82.888	Seriola_dumerili
ENSXMAG00000004867	mrps18a	100	83.422	ENSSLDG00000025435	mrps18a	100	83.422	Seriola_lalandi_dorsalis
ENSXMAG00000004867	mrps18a	100	61.979	ENSSPUG00000011517	MRPS18A	100	61.979	Sphenodon_punctatus
ENSXMAG00000004867	mrps18a	100	82.692	ENSSPAG00000000034	mrps18a	100	82.692	Stegastes_partitus
ENSXMAG00000004867	mrps18a	81	68.627	ENSSSCG00000001692	MRPS18A	84	68.072	Sus_scrofa
ENSXMAG00000004867	mrps18a	79	71.622	ENSTGUG00000008142	MRPS18A	100	71.622	Taeniopygia_guttata
ENSXMAG00000004867	mrps18a	100	79.808	ENSTRUG00000025134	mrps18a	100	79.808	Takifugu_rubripes
ENSXMAG00000004867	mrps18a	100	79.808	ENSTNIG00000016302	mrps18a	100	79.808	Tetraodon_nigroviridis
ENSXMAG00000004867	mrps18a	81	65.116	ENSTBEG00000004094	MRPS18A	60	73.438	Tupaia_belangeri
ENSXMAG00000004867	mrps18a	83	66.279	ENSTTRG00000006354	MRPS18A	63	65.854	Tursiops_truncatus
ENSXMAG00000004867	mrps18a	81	64.706	ENSUAMG00000013758	MRPS18A	87	62.209	Ursus_americanus
ENSXMAG00000004867	mrps18a	82	63.953	ENSUMAG00000005910	MRPS18A	87	62.209	Ursus_maritimus
ENSXMAG00000004867	mrps18a	72	61.314	ENSVVUG00000022444	-	62	63.200	Vulpes_vulpes
ENSXMAG00000004867	mrps18a	81	64.706	ENSVVUG00000029092	-	84	63.855	Vulpes_vulpes
ENSXMAG00000004867	mrps18a	58	72.222	ENSXETG00000003270	mrps18a	82	67.200	Xenopus_tropicalis
ENSXMAG00000004867	mrps18a	100	99.465	ENSXCOG00000007223	mrps18a	100	99.465	Xiphophorus_couchianus