EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005011 (Gene tree)
Gene ID: 102227302
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4634 bases
Position: chr18:28994967-28999600
Accession: 102227302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000031576	Methyltransf_8	PF05148.15	1.3e-88	1	1
ENSXMAP00000005010	Methyltransf_8	PF05148.15	1.5e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000005015	-	1629	XM_023351420	ENSXMAP00000005010	542 (aa)	XP_023207188	M3ZS17
ENSXMAT00000021551	-	2170	-	ENSXMAP00000031576	480 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000005011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005011	rrp8	51	57.831	ENSG00000132275	RRP8	77	63.889	Homo_sapiens
ENSXMAG00000005011	rrp8	100	59.180	ENSAPOG00000008509	-	100	58.467	Acanthochromis_polyacanthus
ENSXMAG00000005011	rrp8	100	59.180	ENSAPOG00000010798	-	98	58.467	Acanthochromis_polyacanthus
ENSXMAG00000005011	rrp8	100	59.180	ENSAPOG00000010806	rrp8	98	58.467	Acanthochromis_polyacanthus
ENSXMAG00000005011	rrp8	93	55.819	ENSACIG00000019896	rrp8	99	54.941	Amphilophus_citrinellus
ENSXMAG00000005011	rrp8	100	59.253	ENSAOCG00000008785	rrp8	100	59.609	Amphiprion_ocellaris
ENSXMAG00000005011	rrp8	100	59.253	ENSAPEG00000008416	rrp8	100	59.609	Amphiprion_percula
ENSXMAG00000005011	rrp8	93	54.183	ENSATEG00000014110	rrp8	98	53.992	Anabas_testudineus
ENSXMAG00000005011	rrp8	51	58.367	ENSANAG00000028524	RRP8	77	62.963	Aotus_nancymaae
ENSXMAG00000005011	rrp8	100	56.697	ENSACLG00000002746	rrp8	100	56.330	Astatotilapia_calliptera
ENSXMAG00000005011	rrp8	100	44.524	ENSAMXG00000005164	rrp8	100	43.806	Astyanax_mexicanus
ENSXMAG00000005011	rrp8	51	58.367	ENSCJAG00000014012	RRP8	77	62.963	Callithrix_jacchus
ENSXMAG00000005011	rrp8	51	57.028	ENSCAFG00020009685	RRP8	50	60.000	Canis_lupus_dingo
ENSXMAG00000005011	rrp8	50	56.967	ENSTSYG00000003391	RRP8	77	62.963	Carlito_syrichta
ENSXMAG00000005011	rrp8	51	58.776	ENSCCAG00000035197	RRP8	76	62.617	Cebus_capucinus
ENSXMAG00000005011	rrp8	51	58.367	ENSCATG00000029344	RRP8	77	62.963	Cercocebus_atys
ENSXMAG00000005011	rrp8	51	58.367	ENSCSAG00000004345	RRP8	54	57.959	Chlorocebus_sabaeus
ENSXMAG00000005011	rrp8	66	35.423	ENSCING00000003281	-	91	34.069	Ciona_intestinalis
ENSXMAG00000005011	rrp8	81	44.133	ENSCSAVG00000006435	-	89	43.655	Ciona_savignyi
ENSXMAG00000005011	rrp8	51	58.367	ENSCANG00000040771	RRP8	77	62.037	Colobus_angolensis_palliatus
ENSXMAG00000005011	rrp8	54	54.406	ENSCGRG00001003103	Rrp8	50	59.111	Cricetulus_griseus_chok1gshd
ENSXMAG00000005011	rrp8	79	59.635	ENSCSEG00000007330	rrp8	100	59.635	Cynoglossus_semilaevis
ENSXMAG00000005011	rrp8	100	67.311	ENSCVAG00000012032	rrp8	100	66.432	Cyprinodon_variegatus
ENSXMAG00000005011	rrp8	100	45.098	ENSDARG00000071652	rrp8	80	72.072	Danio_rerio
ENSXMAG00000005011	rrp8	51	58.367	ENSDORG00000000103	Rrp8	50	60.000	Dipodomys_ordii
ENSXMAG00000005011	rrp8	52	56.917	ENSETEG00000008877	RRP8	50	60.444	Echinops_telfairi
ENSXMAG00000005011	rrp8	50	58.264	ENSEASG00005001761	RRP8	77	62.963	Equus_asinus_asinus
ENSXMAG00000005011	rrp8	100	44.295	ENSELUG00000008665	rrp8	100	42.785	Esox_lucius
ENSXMAG00000005011	rrp8	50	54.508	ENSFCAG00000015384	RRP8	77	62.963	Felis_catus
ENSXMAG00000005011	rrp8	87	91.667	ENSGAFG00000012331	rrp8	100	91.441	Gambusia_affinis
ENSXMAG00000005011	rrp8	83	58.186	ENSGACG00000011343	rrp8	95	56.927	Gasterosteus_aculeatus
ENSXMAG00000005011	rrp8	51	57.831	ENSGGOG00000000389	RRP8	77	63.889	Gorilla_gorilla
ENSXMAG00000005011	rrp8	100	57.248	ENSHBUG00000017131	rrp8	100	56.434	Haplochromis_burtoni
ENSXMAG00000005011	rrp8	50	58.506	ENSHGLG00000003980	RRP8	50	60.538	Heterocephalus_glaber_female
ENSXMAG00000005011	rrp8	50	58.506	ENSHGLG00100015659	RRP8	50	60.538	Heterocephalus_glaber_male
ENSXMAG00000005011	rrp8	100	50.624	ENSHCOG00000001293	rrp8	100	49.291	Hippocampus_comes
ENSXMAG00000005011	rrp8	100	42.513	ENSIPUG00000017733	rrp8	100	43.728	Ictalurus_punctatus
ENSXMAG00000005011	rrp8	51	57.028	ENSJJAG00000020608	-	50	59.556	Jaculus_jaculus
ENSXMAG00000005011	rrp8	100	61.210	ENSKMAG00000009229	rrp8	100	61.497	Kryptolebias_marmoratus
ENSXMAG00000005011	rrp8	77	60.209	ENSLBEG00000019937	rrp8	100	59.126	Labrus_bergylta
ENSXMAG00000005011	rrp8	54	55.474	ENSLACG00000001252	-	99	46.552	Latimeria_chalumnae
ENSXMAG00000005011	rrp8	64	43.408	ENSLOCG00000013776	-	100	38.191	Lepisosteus_oculatus
ENSXMAG00000005011	rrp8	100	43.169	ENSLOCG00000009591	rrp8	100	42.478	Lepisosteus_oculatus
ENSXMAG00000005011	rrp8	51	58.776	ENSMFAG00000046084	RRP8	77	62.963	Macaca_fascicularis
ENSXMAG00000005011	rrp8	51	58.776	ENSMMUG00000007738	RRP8	77	62.963	Macaca_mulatta
ENSXMAG00000005011	rrp8	51	58.367	ENSMNEG00000029648	RRP8	77	62.963	Macaca_nemestrina
ENSXMAG00000005011	rrp8	51	58.367	ENSMLEG00000035110	RRP8	77	62.963	Mandrillus_leucophaeus
ENSXMAG00000005011	rrp8	100	57.469	ENSMAMG00000009679	rrp8	100	56.942	Mastacembelus_armatus
ENSXMAG00000005011	rrp8	100	56.697	ENSMZEG00005008926	rrp8	100	56.330	Maylandia_zebra
ENSXMAG00000005011	rrp8	93	56.979	ENSMMOG00000015709	rrp8	99	55.278	Mola_mola
ENSXMAG00000005011	rrp8	100	56.842	ENSMALG00000015984	rrp8	100	55.882	Monopterus_albus
ENSXMAG00000005011	rrp8	51	57.430	ENSMPUG00000005510	RRP8	50	60.000	Mustela_putorius_furo
ENSXMAG00000005011	rrp8	61	58.025	ENSMLUG00000008938	RRP8	61	60.000	Myotis_lucifugus
ENSXMAG00000005011	rrp8	66	56.400	ENSNGAG00000012450	Rrp8	64	59.556	Nannospalax_galili
ENSXMAG00000005011	rrp8	83	58.955	ENSNBRG00000023416	rrp8	100	80.000	Neolamprologus_brichardi
ENSXMAG00000005011	rrp8	51	57.430	ENSNLEG00000017445	RRP8	55	56.627	Nomascus_leucogenys
ENSXMAG00000005011	rrp8	51	57.831	ENSOPRG00000008052	RRP8	50	60.444	Ochotona_princeps
ENSXMAG00000005011	rrp8	73	50.739	ENSONIG00000016861	rrp8	96	50.985	Oreochromis_niloticus
ENSXMAG00000005011	rrp8	51	58.233	ENSOCUG00000027619	RRP8	55	57.831	Oryctolagus_cuniculus
ENSXMAG00000005011	rrp8	100	55.536	ENSORLG00000004175	rrp8	99	55.714	Oryzias_latipes
ENSXMAG00000005011	rrp8	100	55.714	ENSORLG00020011413	rrp8	99	55.360	Oryzias_latipes_hni
ENSXMAG00000005011	rrp8	100	55.793	ENSORLG00015015410	rrp8	99	55.009	Oryzias_latipes_hsok
ENSXMAG00000005011	rrp8	100	55.142	ENSOMEG00000003161	rrp8	100	54.657	Oryzias_melastigma
ENSXMAG00000005011	rrp8	51	55.020	ENSOGAG00000007184	RRP8	50	59.111	Otolemur_garnettii
ENSXMAG00000005011	rrp8	51	57.831	ENSPPAG00000040792	RRP8	77	63.889	Pan_paniscus
ENSXMAG00000005011	rrp8	50	58.091	ENSPPRG00000022654	RRP8	77	62.963	Panthera_pardus
ENSXMAG00000005011	rrp8	50	58.091	ENSPTIG00000011321	RRP8	77	62.963	Panthera_tigris_altaica
ENSXMAG00000005011	rrp8	51	57.831	ENSPTRG00000003297	RRP8	77	63.889	Pan_troglodytes
ENSXMAG00000005011	rrp8	51	57.959	ENSPANG00000006537	RRP8	77	62.963	Papio_anubis
ENSXMAG00000005011	rrp8	100	43.881	ENSPKIG00000024217	rrp8	100	43.674	Paramormyrops_kingsleyae
ENSXMAG00000005011	rrp8	51	55.823	ENSPEMG00000017257	Rrp8	50	58.667	Peromyscus_maniculatus_bairdii
ENSXMAG00000005011	rrp8	100	89.071	ENSPFOG00000007308	rrp8	100	88.525	Poecilia_formosa
ENSXMAG00000005011	rrp8	100	89.253	ENSPLAG00000011349	rrp8	100	89.253	Poecilia_latipinna
ENSXMAG00000005011	rrp8	100	88.889	ENSPMEG00000009888	rrp8	100	88.342	Poecilia_mexicana
ENSXMAG00000005011	rrp8	87	86.598	ENSPREG00000008450	rrp8	100	87.216	Poecilia_reticulata
ENSXMAG00000005011	rrp8	51	57.831	ENSPPYG00000003538	RRP8	54	57.028	Pongo_abelii
ENSXMAG00000005011	rrp8	51	55.952	ENSPCOG00000024627	RRP8	77	62.963	Propithecus_coquereli
ENSXMAG00000005011	rrp8	100	56.182	ENSPNYG00000002878	rrp8	100	55.818	Pundamilia_nyererei
ENSXMAG00000005011	rrp8	52	56.000	ENSRNOG00000018766	Rrp8	100	60.000	Rattus_norvegicus
ENSXMAG00000005011	rrp8	51	58.367	ENSRBIG00000044485	RRP8	77	62.037	Rhinopithecus_bieti
ENSXMAG00000005011	rrp8	51	58.367	ENSRROG00000045322	RRP8	77	62.037	Rhinopithecus_roxellana
ENSXMAG00000005011	rrp8	51	58.367	ENSSBOG00000035280	RRP8	77	62.963	Saimiri_boliviensis_boliviensis
ENSXMAG00000005011	rrp8	100	44.887	ENSSFOG00015003917	rrp8	99	43.537	Scleropages_formosus
ENSXMAG00000005011	rrp8	100	58.152	ENSSMAG00000004859	rrp8	100	57.065	Scophthalmus_maximus
ENSXMAG00000005011	rrp8	100	58.524	ENSSDUG00000010477	rrp8	100	56.790	Seriola_dumerili
ENSXMAG00000005011	rrp8	100	58.407	ENSSLDG00000000521	rrp8	100	57.018	Seriola_lalandi_dorsalis
ENSXMAG00000005011	rrp8	77	64.341	ENSSPAG00000006664	rrp8	100	63.980	Stegastes_partitus
ENSXMAG00000005011	rrp8	100	52.338	ENSTRUG00000021812	rrp8	100	51.619	Takifugu_rubripes
ENSXMAG00000005011	rrp8	51	56.627	ENSTBEG00000000237	RRP8	54	59.556	Tupaia_belangeri
ENSXMAG00000005011	rrp8	51	57.430	ENSUAMG00000025756	RRP8	78	62.385	Ursus_americanus
ENSXMAG00000005011	rrp8	68	56.225	ENSVVUG00000024346	RRP8	51	59.556	Vulpes_vulpes
ENSXMAG00000005011	rrp8	79	98.158	ENSXCOG00000006156	rrp8	100	98.158	Xiphophorus_couchianus