EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005103 (Gene tree)
Gene ID: 102228323
Gene Symbol: tdrd3
Alias: zgc:77174
Full Name: tudor domain containing 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 15756 bases
Position: chr4:22409006-22424761
Accession: 102228323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005124	TUDOR	PF00567.24	8.4e-08	1	1
ENSXMAP00000023430	TUDOR	PF00567.24	8.4e-08	1	1
ENSXMAP00000021678	TUDOR	PF00567.24	8.5e-08	1	1
ENSXMAP00000005124	SMN	PF06003.12	2.5e-09	1	1
ENSXMAP00000023430	SMN	PF06003.12	2.5e-09	1	1
ENSXMAP00000021678	SMN	PF06003.12	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000033631	-	4387	-	ENSXMAP00000023430	786 (aa)	-	UPI0003B494F0
ENSXMAT00000032066	-	3926	-	ENSXMAP00000021678	796 (aa)	-	-
ENSXMAT00000005129	-	4075	XM_014473008	ENSXMAP00000005124	786 (aa)	XP_014328494	M3ZSD1

Gene Model

Click here to download ENSXMAG00000005103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005103's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005103	tdrd3	99	48.878	ENSG00000083544	TDRD3	100	71.318	Homo_sapiens
ENSXMAG00000005103	tdrd3	100	80.330	ENSAPOG00000016078	tdrd3	100	80.330	Acanthochromis_polyacanthus
ENSXMAG00000005103	tdrd3	98	48.564	ENSAMEG00000000082	TDRD3	98	47.810	Ailuropoda_melanoleuca
ENSXMAG00000005103	tdrd3	100	78.934	ENSACIG00000023900	tdrd3	100	78.934	Amphilophus_citrinellus
ENSXMAG00000005103	tdrd3	100	81.472	ENSAOCG00000001410	tdrd3	100	81.472	Amphiprion_ocellaris
ENSXMAG00000005103	tdrd3	100	78.046	ENSAPEG00000022810	tdrd3	100	78.046	Amphiprion_percula
ENSXMAG00000005103	tdrd3	100	77.342	ENSATEG00000014570	tdrd3	100	77.342	Anabas_testudineus
ENSXMAG00000005103	tdrd3	92	47.709	ENSAPLG00000014316	TDRD3	100	47.568	Anas_platyrhynchos
ENSXMAG00000005103	tdrd3	99	47.778	ENSACAG00000004923	TDRD3	99	47.631	Anolis_carolinensis
ENSXMAG00000005103	tdrd3	99	48.808	ENSANAG00000030827	-	99	48.553	Aotus_nancymaae
ENSXMAG00000005103	tdrd3	51	54.737	ENSANAG00000027927	-	64	61.856	Aotus_nancymaae
ENSXMAG00000005103	tdrd3	100	78.074	ENSACLG00000022962	tdrd3	100	78.454	Astatotilapia_calliptera
ENSXMAG00000005103	tdrd3	100	57.478	ENSAMXG00000006847	tdrd3	100	57.072	Astyanax_mexicanus
ENSXMAG00000005103	tdrd3	99	49.256	ENSBTAG00000009308	TDRD3	99	49.005	Bos_taurus
ENSXMAG00000005103	tdrd3	99	48.689	ENSCJAG00000003853	TDRD3	99	48.185	Callithrix_jacchus
ENSXMAG00000005103	tdrd3	98	48.601	ENSCAFG00000023746	-	98	48.342	Canis_familiaris
ENSXMAG00000005103	tdrd3	98	48.914	ENSCAFG00020018076	-	99	48.656	Canis_lupus_dingo
ENSXMAG00000005103	tdrd3	99	49.002	ENSCHIG00000020019	TDRD3	99	48.500	Capra_hircus
ENSXMAG00000005103	tdrd3	98	48.718	ENSTSYG00000002254	TDRD3	100	48.458	Carlito_syrichta
ENSXMAG00000005103	tdrd3	98	40.050	ENSCAPG00000012313	TDRD3	98	39.773	Cavia_aperea
ENSXMAG00000005103	tdrd3	99	44.569	ENSCPOG00000010437	TDRD3	99	43.930	Cavia_porcellus
ENSXMAG00000005103	tdrd3	99	48.692	ENSCCAG00000023831	TDRD3	99	48.439	Cebus_capucinus
ENSXMAG00000005103	tdrd3	99	49.500	ENSCATG00000029498	TDRD3	100	48.571	Cercocebus_atys
ENSXMAG00000005103	tdrd3	98	49.241	ENSCLAG00000002654	TDRD3	100	48.731	Chinchilla_lanigera
ENSXMAG00000005103	tdrd3	99	49.250	ENSCSAG00000017640	TDRD3	100	48.447	Chlorocebus_sabaeus
ENSXMAG00000005103	tdrd3	60	63.087	ENSCHOG00000012825	TDRD3	67	63.087	Choloepus_hoffmanni
ENSXMAG00000005103	tdrd3	99	47.750	ENSCPBG00000026646	TDRD3	98	47.619	Chrysemys_picta_bellii
ENSXMAG00000005103	tdrd3	99	49.687	ENSCANG00000034303	TDRD3	99	49.435	Colobus_angolensis_palliatus
ENSXMAG00000005103	tdrd3	99	49.938	ENSCGRG00001011297	Tdrd3	99	49.563	Cricetulus_griseus_chok1gshd
ENSXMAG00000005103	tdrd3	99	49.875	ENSCGRG00000015535	-	99	49.499	Cricetulus_griseus_crigri
ENSXMAG00000005103	tdrd3	100	72.497	ENSCSEG00000000670	tdrd3	100	71.610	Cynoglossus_semilaevis
ENSXMAG00000005103	tdrd3	95	87.919	ENSCVAG00000015641	tdrd3	98	87.919	Cyprinodon_variegatus
ENSXMAG00000005103	tdrd3	100	59.016	ENSDARG00000025421	tdrd3	100	58.134	Danio_rerio
ENSXMAG00000005103	tdrd3	98	48.604	ENSDNOG00000002011	TDRD3	98	48.346	Dasypus_novemcinctus
ENSXMAG00000005103	tdrd3	99	48.050	ENSDORG00000008714	Tdrd3	99	47.667	Dipodomys_ordii
ENSXMAG00000005103	tdrd3	63	56.604	ENSEBUG00000011812	tdrd3	76	42.888	Eptatretus_burgeri
ENSXMAG00000005103	tdrd3	99	49.438	ENSEASG00005015575	TDRD3	99	48.936	Equus_asinus_asinus
ENSXMAG00000005103	tdrd3	99	49.438	ENSECAG00000000550	TDRD3	99	48.936	Equus_caballus
ENSXMAG00000005103	tdrd3	88	42.635	ENSEEUG00000002192	TDRD3	100	42.330	Erinaceus_europaeus
ENSXMAG00000005103	tdrd3	99	50.697	ENSELUG00000000994	tdrd3	99	50.802	Esox_lucius
ENSXMAG00000005103	tdrd3	99	48.625	ENSFCAG00000022126	TDRD3	99	48.120	Felis_catus
ENSXMAG00000005103	tdrd3	99	47.722	ENSFALG00000007927	TDRD3	99	46.509	Ficedula_albicollis
ENSXMAG00000005103	tdrd3	98	49.054	ENSFDAG00000011552	TDRD3	100	48.420	Fukomys_damarensis
ENSXMAG00000005103	tdrd3	100	89.186	ENSFHEG00000009513	tdrd3	100	89.186	Fundulus_heteroclitus
ENSXMAG00000005103	tdrd3	80	63.557	ENSGMOG00000005733	tdrd3	100	54.220	Gadus_morhua
ENSXMAG00000005103	tdrd3	99	47.722	ENSGALG00000016936	TDRD3	99	47.462	Gallus_gallus
ENSXMAG00000005103	tdrd3	100	96.819	ENSGAFG00000012013	tdrd3	100	96.819	Gambusia_affinis
ENSXMAG00000005103	tdrd3	100	72.475	ENSGACG00000015264	tdrd3	100	72.475	Gasterosteus_aculeatus
ENSXMAG00000005103	tdrd3	99	48.310	ENSGAGG00000003173	TDRD3	99	48.055	Gopherus_agassizii
ENSXMAG00000005103	tdrd3	98	48.805	ENSGGOG00000025560	TDRD3	100	48.550	Gorilla_gorilla
ENSXMAG00000005103	tdrd3	100	78.074	ENSHBUG00000007081	tdrd3	100	78.454	Haplochromis_burtoni
ENSXMAG00000005103	tdrd3	88	42.025	ENSHGLG00000014119	-	100	41.517	Heterocephalus_glaber_female
ENSXMAG00000005103	tdrd3	92	41.208	ENSHGLG00000010652	-	97	41.074	Heterocephalus_glaber_female
ENSXMAG00000005103	tdrd3	99	49.494	ENSHGLG00000018707	-	99	48.985	Heterocephalus_glaber_female
ENSXMAG00000005103	tdrd3	99	42.677	ENSHGLG00000009668	-	100	42.278	Heterocephalus_glaber_female
ENSXMAG00000005103	tdrd3	80	72.028	ENSHGLG00100017738	-	94	72.028	Heterocephalus_glaber_male
ENSXMAG00000005103	tdrd3	98	49.362	ENSHGLG00100010966	-	100	48.721	Heterocephalus_glaber_male
ENSXMAG00000005103	tdrd3	100	65.820	ENSHCOG00000002157	tdrd3	100	65.820	Hippocampus_comes
ENSXMAG00000005103	tdrd3	100	56.984	ENSIPUG00000012320	tdrd3	100	56.984	Ictalurus_punctatus
ENSXMAG00000005103	tdrd3	98	49.872	ENSSTOG00000028945	-	100	49.616	Ictidomys_tridecemlineatus
ENSXMAG00000005103	tdrd3	95	47.036	ENSJJAG00000023665	Tdrd3	97	47.409	Jaculus_jaculus
ENSXMAG00000005103	tdrd3	100	81.957	ENSKMAG00000021849	tdrd3	100	81.957	Kryptolebias_marmoratus
ENSXMAG00000005103	tdrd3	95	77.660	ENSLBEG00000011777	tdrd3	100	77.660	Labrus_bergylta
ENSXMAG00000005103	tdrd3	99	48.383	ENSLACG00000001412	TDRD3	99	49.375	Latimeria_chalumnae
ENSXMAG00000005103	tdrd3	100	55.000	ENSLOCG00000004652	tdrd3	100	55.038	Lepisosteus_oculatus
ENSXMAG00000005103	tdrd3	68	39.711	ENSLAFG00000002705	TDRD3	99	40.036	Loxodonta_africana
ENSXMAG00000005103	tdrd3	99	49.625	ENSMFAG00000007606	TDRD3	100	48.696	Macaca_fascicularis
ENSXMAG00000005103	tdrd3	99	49.500	ENSMMUG00000007169	TDRD3	100	48.696	Macaca_mulatta
ENSXMAG00000005103	tdrd3	99	49.875	ENSMNEG00000002038	TDRD3	100	48.820	Macaca_nemestrina
ENSXMAG00000005103	tdrd3	56	38.022	ENSMLEG00000039737	TDRD3	98	36.795	Mandrillus_leucophaeus
ENSXMAG00000005103	tdrd3	100	75.853	ENSMAMG00000003998	tdrd3	100	75.853	Mastacembelus_armatus
ENSXMAG00000005103	tdrd3	100	78.074	ENSMZEG00005004551	tdrd3	100	78.454	Maylandia_zebra
ENSXMAG00000005103	tdrd3	99	47.925	ENSMGAG00000014961	TDRD3	99	47.667	Meleagris_gallopavo
ENSXMAG00000005103	tdrd3	99	48.005	ENSMAUG00000012562	Tdrd3	99	47.875	Mesocricetus_auratus
ENSXMAG00000005103	tdrd3	100	47.842	ENSMICG00000009982	TDRD3	100	47.525	Microcebus_murinus
ENSXMAG00000005103	tdrd3	99	49.559	ENSMOCG00000012962	Tdrd3	99	49.178	Microtus_ochrogaster
ENSXMAG00000005103	tdrd3	100	76.142	ENSMMOG00000018156	tdrd3	100	76.142	Mola_mola
ENSXMAG00000005103	tdrd3	55	71.053	ENSMODG00000006316	TDRD3	71	71.053	Monodelphis_domestica
ENSXMAG00000005103	tdrd3	100	75.254	ENSMALG00000015327	tdrd3	98	78.179	Monopterus_albus
ENSXMAG00000005103	tdrd3	99	49.305	MGP_CAROLIEiJ_G0019551	Tdrd3	99	49.299	Mus_caroli
ENSXMAG00000005103	tdrd3	99	48.799	ENSMUSG00000022019	Tdrd3	99	48.535	Mus_musculus
ENSXMAG00000005103	tdrd3	99	49.369	MGP_PahariEiJ_G0030569	Tdrd3	99	49.054	Mus_pahari
ENSXMAG00000005103	tdrd3	99	49.112	MGP_SPRETEiJ_G0020448	Tdrd3	99	48.849	Mus_spretus
ENSXMAG00000005103	tdrd3	83	44.925	ENSMPUG00000009630	TDRD3	88	44.843	Mustela_putorius_furo
ENSXMAG00000005103	tdrd3	94	45.346	ENSMLUG00000000235	TDRD3	98	45.067	Myotis_lucifugus
ENSXMAG00000005103	tdrd3	99	48.125	ENSNGAG00000004523	Tdrd3	99	48.237	Nannospalax_galili
ENSXMAG00000005103	tdrd3	100	77.947	ENSNBRG00000018789	tdrd3	100	78.454	Neolamprologus_brichardi
ENSXMAG00000005103	tdrd3	99	48.872	ENSNLEG00000015920	TDRD3	100	48.070	Nomascus_leucogenys
ENSXMAG00000005103	tdrd3	77	57.872	ENSMEUG00000010114	TDRD3	89	57.872	Notamacropus_eugenii
ENSXMAG00000005103	tdrd3	88	41.135	ENSOPRG00000007868	TDRD3	100	40.825	Ochotona_princeps
ENSXMAG00000005103	tdrd3	98	49.118	ENSODEG00000000576	-	99	48.747	Octodon_degus
ENSXMAG00000005103	tdrd3	69	55.076	ENSODEG00000014559	-	77	55.897	Octodon_degus
ENSXMAG00000005103	tdrd3	100	77.947	ENSONIG00000003233	tdrd3	100	78.327	Oreochromis_niloticus
ENSXMAG00000005103	tdrd3	52	35.047	ENSOANG00000011775	-	100	34.742	Ornithorhynchus_anatinus
ENSXMAG00000005103	tdrd3	99	48.995	ENSOCUG00000014261	TDRD3	99	48.741	Oryctolagus_cuniculus
ENSXMAG00000005103	tdrd3	100	74.746	ENSORLG00000004502	tdrd3	100	74.746	Oryzias_latipes
ENSXMAG00000005103	tdrd3	98	71.851	ENSORLG00020017271	tdrd3	100	71.374	Oryzias_latipes_hni
ENSXMAG00000005103	tdrd3	100	74.905	ENSORLG00015015519	tdrd3	100	74.905	Oryzias_latipes_hsok
ENSXMAG00000005103	tdrd3	100	75.253	ENSOMEG00000015668	tdrd3	100	75.253	Oryzias_melastigma
ENSXMAG00000005103	tdrd3	99	49.239	ENSOGAG00000005898	TDRD3	99	48.985	Otolemur_garnettii
ENSXMAG00000005103	tdrd3	98	48.992	ENSOARG00000006244	TDRD3	99	48.737	Ovis_aries
ENSXMAG00000005103	tdrd3	99	49.127	ENSPPAG00000010477	TDRD3	100	48.327	Pan_paniscus
ENSXMAG00000005103	tdrd3	98	48.802	ENSPPRG00000008512	TDRD3	100	48.546	Panthera_pardus
ENSXMAG00000005103	tdrd3	98	48.802	ENSPTIG00000002537	TDRD3	100	48.546	Panthera_tigris_altaica
ENSXMAG00000005103	tdrd3	99	48.878	ENSPTRG00000005918	TDRD3	100	48.350	Pan_troglodytes
ENSXMAG00000005103	tdrd3	99	49.438	ENSPANG00000019138	TDRD3	100	48.511	Papio_anubis
ENSXMAG00000005103	tdrd3	100	51.576	ENSPKIG00000008894	tdrd3	100	51.576	Paramormyrops_kingsleyae
ENSXMAG00000005103	tdrd3	88	45.315	ENSPSIG00000013821	TDRD3	100	45.161	Pelodiscus_sinensis
ENSXMAG00000005103	tdrd3	100	66.793	ENSPMGG00000015263	tdrd3	99	71.180	Periophthalmus_magnuspinnatus
ENSXMAG00000005103	tdrd3	99	48.747	ENSPEMG00000004287	Tdrd3	99	48.492	Peromyscus_maniculatus_bairdii
ENSXMAG00000005103	tdrd3	99	49.306	ENSPCIG00000011476	-	99	49.433	Phascolarctos_cinereus
ENSXMAG00000005103	tdrd3	100	96.310	ENSPFOG00000012450	tdrd3	100	96.310	Poecilia_formosa
ENSXMAG00000005103	tdrd3	92	95.856	ENSPLAG00000016397	tdrd3	97	95.856	Poecilia_latipinna
ENSXMAG00000005103	tdrd3	92	94.890	ENSPMEG00000019048	tdrd3	99	94.890	Poecilia_mexicana
ENSXMAG00000005103	tdrd3	100	96.692	ENSPREG00000021145	tdrd3	100	96.692	Poecilia_reticulata
ENSXMAG00000005103	tdrd3	99	48.872	ENSPPYG00000005401	TDRD3	100	48.194	Pongo_abelii
ENSXMAG00000005103	tdrd3	88	42.142	ENSPCAG00000014959	TDRD3	100	41.980	Procavia_capensis
ENSXMAG00000005103	tdrd3	75	76.042	ENSPCOG00000019937	TDRD3	100	76.042	Propithecus_coquereli
ENSXMAG00000005103	tdrd3	88	47.183	ENSPVAG00000010549	TDRD3	100	47.034	Pteropus_vampyrus
ENSXMAG00000005103	tdrd3	100	77.947	ENSPNYG00000001569	tdrd3	100	78.327	Pundamilia_nyererei
ENSXMAG00000005103	tdrd3	100	56.104	ENSPNAG00000026219	tdrd3	100	55.941	Pygocentrus_nattereri
ENSXMAG00000005103	tdrd3	88	46.241	ENSRNOG00000009034	Tdrd3	100	46.176	Rattus_norvegicus
ENSXMAG00000005103	tdrd3	99	47.309	ENSRBIG00000031218	TDRD3	99	47.051	Rhinopithecus_bieti
ENSXMAG00000005103	tdrd3	99	49.248	ENSRROG00000044516	TDRD3	99	48.995	Rhinopithecus_roxellana
ENSXMAG00000005103	tdrd3	98	49.121	ENSSBOG00000022790	TDRD3	100	48.615	Saimiri_boliviensis_boliviensis
ENSXMAG00000005103	tdrd3	98	46.320	ENSSHAG00000011994	TDRD3	100	46.066	Sarcophilus_harrisii
ENSXMAG00000005103	tdrd3	100	54.304	ENSSFOG00015005175	tdrd3	97	52.911	Scleropages_formosus
ENSXMAG00000005103	tdrd3	95	76.463	ENSSMAG00000011677	tdrd3	100	76.463	Scophthalmus_maximus
ENSXMAG00000005103	tdrd3	100	80.355	ENSSDUG00000004594	tdrd3	100	80.355	Seriola_dumerili
ENSXMAG00000005103	tdrd3	100	74.937	ENSSLDG00000002918	tdrd3	100	74.937	Seriola_lalandi_dorsalis
ENSXMAG00000005103	tdrd3	88	45.969	ENSSARG00000003028	TDRD3	100	45.892	Sorex_araneus
ENSXMAG00000005103	tdrd3	99	47.355	ENSSPUG00000001191	TDRD3	98	47.643	Sphenodon_punctatus
ENSXMAG00000005103	tdrd3	100	81.980	ENSSPAG00000005342	tdrd3	100	81.980	Stegastes_partitus
ENSXMAG00000005103	tdrd3	100	48.823	ENSSSCG00000009449	TDRD3	100	48.571	Sus_scrofa
ENSXMAG00000005103	tdrd3	99	48.542	ENSTGUG00000012476	-	99	48.477	Taeniopygia_guttata
ENSXMAG00000005103	tdrd3	95	69.774	ENSTRUG00000017194	tdrd3	95	70.439	Takifugu_rubripes
ENSXMAG00000005103	tdrd3	100	68.101	ENSTNIG00000005230	tdrd3	100	68.354	Tetraodon_nigroviridis
ENSXMAG00000005103	tdrd3	88	41.772	ENSTTRG00000010071	TDRD3	99	41.467	Tursiops_truncatus
ENSXMAG00000005103	tdrd3	92	46.846	ENSUAMG00000017369	-	98	46.533	Ursus_americanus
ENSXMAG00000005103	tdrd3	98	43.664	ENSUMAG00000014526	TDRD3	100	45.543	Ursus_maritimus
ENSXMAG00000005103	tdrd3	88	47.133	ENSVPAG00000011763	TDRD3	100	46.844	Vicugna_pacos
ENSXMAG00000005103	tdrd3	98	49.170	ENSVVUG00000029140	TDRD3	96	47.897	Vulpes_vulpes
ENSXMAG00000005103	tdrd3	98	98.448	ENSXCOG00000001875	tdrd3	97	98.448	Xiphophorus_couchianus