EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005196 (Gene tree)
Gene ID: 102219533
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 19612 bases
Position: chr8:661535-681146
Accession: 102219533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005226	YTH	PF04146.15	8.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000005231	-	6154	XM_023338110	ENSXMAP00000005226	662 (aa)	XP_023193878	M3ZSN3

Gene Model

Click here to download ENSXMAG00000005196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005196	ythdc1	61	65.138	ENSG00000083896	YTHDC1	56	60.000	Homo_sapiens
ENSXMAG00000005196	ythdc1	83	79.610	ENSAPOG00000013997	ythdc1	93	73.552	Acanthochromis_polyacanthus
ENSXMAG00000005196	ythdc1	61	64.908	ENSAMEG00000005688	YTHDC1	57	59.202	Ailuropoda_melanoleuca
ENSXMAG00000005196	ythdc1	82	79.433	ENSACIG00000019728	ythdc1	62	76.658	Amphilophus_citrinellus
ENSXMAG00000005196	ythdc1	94	82.003	ENSAOCG00000000239	ythdc1	94	82.629	Amphiprion_ocellaris
ENSXMAG00000005196	ythdc1	83	82.301	ENSAPEG00000000618	ythdc1	89	83.481	Amphiprion_percula
ENSXMAG00000005196	ythdc1	89	78.297	ENSATEG00000023007	ythdc1	91	80.645	Anabas_testudineus
ENSXMAG00000005196	ythdc1	92	53.778	ENSAPLG00000009921	YTHDC1	60	59.864	Anas_platyrhynchos
ENSXMAG00000005196	ythdc1	94	52.269	ENSACAG00000009697	YTHDC1	58	56.858	Anolis_carolinensis
ENSXMAG00000005196	ythdc1	61	65.138	ENSANAG00000001522	YTHDC1	58	58.482	Aotus_nancymaae
ENSXMAG00000005196	ythdc1	94	79.782	ENSACLG00000019371	ythdc1	94	80.908	Astatotilapia_calliptera
ENSXMAG00000005196	ythdc1	94	62.693	ENSAMXG00000006978	ythdc1	92	58.157	Astyanax_mexicanus
ENSXMAG00000005196	ythdc1	61	63.991	ENSBTAG00000015572	YTHDC1	57	58.186	Bos_taurus
ENSXMAG00000005196	ythdc1	61	65.138	ENSCJAG00000009934	YTHDC1	56	60.000	Callithrix_jacchus
ENSXMAG00000005196	ythdc1	61	64.908	ENSCAFG00000002821	YTHDC1	57	59.202	Canis_familiaris
ENSXMAG00000005196	ythdc1	61	64.908	ENSCAFG00020027112	YTHDC1	57	59.202	Canis_lupus_dingo
ENSXMAG00000005196	ythdc1	61	57.590	ENSCHIG00000004810	YTHDC1	50	65.091	Capra_hircus
ENSXMAG00000005196	ythdc1	61	65.138	ENSTSYG00000011668	YTHDC1	57	59.545	Carlito_syrichta
ENSXMAG00000005196	ythdc1	61	57.931	ENSCPOG00000010929	YTHDC1	54	52.644	Cavia_porcellus
ENSXMAG00000005196	ythdc1	61	65.138	ENSCCAG00000035754	YTHDC1	57	59.545	Cebus_capucinus
ENSXMAG00000005196	ythdc1	61	64.904	ENSCATG00000036320	YTHDC1	51	65.091	Cercocebus_atys
ENSXMAG00000005196	ythdc1	62	63.765	ENSCLAG00000005482	YTHDC1	58	58.259	Chinchilla_lanigera
ENSXMAG00000005196	ythdc1	61	65.138	ENSCSAG00000005252	YTHDC1	57	58.758	Chlorocebus_sabaeus
ENSXMAG00000005196	ythdc1	93	57.011	ENSCPBG00000021965	YTHDC1	62	58.628	Chrysemys_picta_bellii
ENSXMAG00000005196	ythdc1	61	65.138	ENSCANG00000004769	YTHDC1	58	58.482	Colobus_angolensis_palliatus
ENSXMAG00000005196	ythdc1	61	64.663	ENSCGRG00001000816	Ythdc1	56	58.933	Cricetulus_griseus_chok1gshd
ENSXMAG00000005196	ythdc1	61	64.908	ENSCGRG00000009807	Ythdc1	56	59.762	Cricetulus_griseus_crigri
ENSXMAG00000005196	ythdc1	94	79.906	ENSCSEG00000020404	ythdc1	94	79.592	Cynoglossus_semilaevis
ENSXMAG00000005196	ythdc1	61	93.300	ENSCVAG00000022349	ythdc1	94	84.567	Cyprinodon_variegatus
ENSXMAG00000005196	ythdc1	94	62.112	ENSDARG00000051953	ythdc1	92	57.424	Danio_rerio
ENSXMAG00000005196	ythdc1	94	54.077	ENSDNOG00000004949	YTHDC1	57	59.545	Dasypus_novemcinctus
ENSXMAG00000005196	ythdc1	61	65.138	ENSDORG00000013045	Ythdc1	58	59.545	Dipodomys_ordii
ENSXMAG00000005196	ythdc1	79	67.532	ENSETEG00000001878	YTHDC1	52	80.000	Echinops_telfairi
ENSXMAG00000005196	ythdc1	61	64.908	ENSEASG00005018383	YTHDC1	61	59.202	Equus_asinus_asinus
ENSXMAG00000005196	ythdc1	84	65.248	ENSECAG00000018303	YTHDC1	56	64.230	Equus_caballus
ENSXMAG00000005196	ythdc1	61	63.844	ENSEEUG00000015466	YTHDC1	57	58.957	Erinaceus_europaeus
ENSXMAG00000005196	ythdc1	94	59.496	ENSELUG00000014029	ythdc1	92	57.143	Esox_lucius
ENSXMAG00000005196	ythdc1	61	64.908	ENSFCAG00000026791	YTHDC1	57	59.202	Felis_catus
ENSXMAG00000005196	ythdc1	76	62.031	ENSFALG00000006581	YTHDC1	81	65.323	Ficedula_albicollis
ENSXMAG00000005196	ythdc1	61	64.679	ENSFDAG00000018560	YTHDC1	58	59.318	Fukomys_damarensis
ENSXMAG00000005196	ythdc1	66	81.166	ENSGMOG00000018815	ythdc1	77	81.166	Gadus_morhua
ENSXMAG00000005196	ythdc1	92	54.504	ENSGALG00000035906	YTHDC1	55	59.637	Gallus_gallus
ENSXMAG00000005196	ythdc1	70	85.161	ENSGAFG00000001759	ythdc1	55	98.795	Gambusia_affinis
ENSXMAG00000005196	ythdc1	94	67.873	ENSGACG00000015486	ythdc1	94	67.873	Gasterosteus_aculeatus
ENSXMAG00000005196	ythdc1	94	56.662	ENSGAGG00000007108	YTHDC1	57	64.563	Gopherus_agassizii
ENSXMAG00000005196	ythdc1	61	64.904	ENSGGOG00000021958	YTHDC1	56	60.000	Gorilla_gorilla
ENSXMAG00000005196	ythdc1	94	79.938	ENSHBUG00000019288	ythdc1	94	81.064	Haplochromis_burtoni
ENSXMAG00000005196	ythdc1	61	64.423	ENSHGLG00000006319	-	58	58.259	Heterocephalus_glaber_female
ENSXMAG00000005196	ythdc1	61	63.409	ENSHGLG00100001556	-	58	57.143	Heterocephalus_glaber_male
ENSXMAG00000005196	ythdc1	69	79.897	ENSHCOG00000001520	ythdc1	86	77.299	Hippocampus_comes
ENSXMAG00000005196	ythdc1	94	60.681	ENSIPUG00000018136	ythdc1	92	58.308	Ictalurus_punctatus
ENSXMAG00000005196	ythdc1	61	63.964	ENSSTOG00000013652	YTHDC1	57	58.482	Ictidomys_tridecemlineatus
ENSXMAG00000005196	ythdc1	61	64.423	ENSJJAG00000010268	Ythdc1	57	58.933	Jaculus_jaculus
ENSXMAG00000005196	ythdc1	61	86.275	ENSKMAG00000006483	ythdc1	85	88.480	Kryptolebias_marmoratus
ENSXMAG00000005196	ythdc1	61	73.995	ENSLBEG00000020831	ythdc1	81	66.602	Labrus_bergylta
ENSXMAG00000005196	ythdc1	94	55.764	ENSLOCG00000003045	ythdc1	52	65.969	Lepisosteus_oculatus
ENSXMAG00000005196	ythdc1	80	52.340	ENSLAFG00000021592	YTHDC1	65	64.365	Loxodonta_africana
ENSXMAG00000005196	ythdc1	61	64.904	ENSMFAG00000031927	YTHDC1	58	58.482	Macaca_fascicularis
ENSXMAG00000005196	ythdc1	61	65.138	ENSMMUG00000002265	YTHDC1	58	58.482	Macaca_mulatta
ENSXMAG00000005196	ythdc1	61	65.138	ENSMNEG00000033751	YTHDC1	58	58.482	Macaca_nemestrina
ENSXMAG00000005196	ythdc1	61	65.138	ENSMLEG00000042147	YTHDC1	58	58.482	Mandrillus_leucophaeus
ENSXMAG00000005196	ythdc1	60	87.376	ENSMAMG00000013122	ythdc1	92	78.106	Mastacembelus_armatus
ENSXMAG00000005196	ythdc1	94	79.782	ENSMZEG00005023173	ythdc1	94	80.908	Maylandia_zebra
ENSXMAG00000005196	ythdc1	61	64.663	ENSMAUG00000001286	Ythdc1	56	59.762	Mesocricetus_auratus
ENSXMAG00000005196	ythdc1	94	53.672	ENSMICG00000034640	YTHDC1	55	60.476	Microcebus_murinus
ENSXMAG00000005196	ythdc1	61	64.663	ENSMOCG00000020201	Ythdc1	56	59.762	Microtus_ochrogaster
ENSXMAG00000005196	ythdc1	75	73.106	ENSMMOG00000021200	ythdc1	93	67.477	Mola_mola
ENSXMAG00000005196	ythdc1	51	48.844	ENSMODG00000004117	-	74	56.972	Monodelphis_domestica
ENSXMAG00000005196	ythdc1	66	43.568	ENSMODG00000009173	-	60	57.692	Monodelphis_domestica
ENSXMAG00000005196	ythdc1	94	54.801	ENSMODG00000020754	-	92	52.199	Monodelphis_domestica
ENSXMAG00000005196	ythdc1	84	78.596	ENSMALG00000013412	ythdc1	93	80.496	Monopterus_albus
ENSXMAG00000005196	ythdc1	62	64.350	ENSMUSG00000035851	Ythdc1	56	58.933	Mus_musculus
ENSXMAG00000005196	ythdc1	62	64.350	MGP_PahariEiJ_G0017126	Ythdc1	56	59.762	Mus_pahari
ENSXMAG00000005196	ythdc1	72	68.274	ENSMPUG00000001743	YTHDC1	60	64.230	Mustela_putorius_furo
ENSXMAG00000005196	ythdc1	92	53.779	ENSMLUG00000016300	YTHDC1	58	58.980	Myotis_lucifugus
ENSXMAG00000005196	ythdc1	87	69.218	ENSNBRG00000007663	ythdc1	87	77.804	Neolamprologus_brichardi
ENSXMAG00000005196	ythdc1	61	63.288	ENSNLEG00000009202	YTHDC1	57	57.812	Nomascus_leucogenys
ENSXMAG00000005196	ythdc1	68	67.500	ENSOPRG00000008986	YTHDC1	62	62.112	Ochotona_princeps
ENSXMAG00000005196	ythdc1	61	64.220	ENSODEG00000001715	YTHDC1	57	59.318	Octodon_degus
ENSXMAG00000005196	ythdc1	94	95.455	ENSONIG00000012651	ythdc1	90	93.333	Oreochromis_niloticus
ENSXMAG00000005196	ythdc1	85	68.262	ENSOCUG00000015886	YTHDC1	72	64.230	Oryctolagus_cuniculus
ENSXMAG00000005196	ythdc1	94	79.081	ENSORLG00000030544	ythdc1	95	78.605	Oryzias_latipes
ENSXMAG00000005196	ythdc1	94	79.905	ENSORLG00020019316	ythdc1	95	79.272	Oryzias_latipes_hni
ENSXMAG00000005196	ythdc1	94	75.824	ENSOMEG00000000551	ythdc1	95	76.138	Oryzias_melastigma
ENSXMAG00000005196	ythdc1	61	65.596	ENSOGAG00000003362	YTHDC1	57	59.202	Otolemur_garnettii
ENSXMAG00000005196	ythdc1	61	63.991	ENSOARG00000008633	YTHDC1	57	58.186	Ovis_aries
ENSXMAG00000005196	ythdc1	61	64.904	ENSPPAG00000041315	YTHDC1	58	58.482	Pan_paniscus
ENSXMAG00000005196	ythdc1	61	64.663	ENSPPRG00000011979	YTHDC1	56	59.629	Panthera_pardus
ENSXMAG00000005196	ythdc1	61	64.183	ENSPTIG00000015527	YTHDC1	58	57.734	Panthera_tigris_altaica
ENSXMAG00000005196	ythdc1	61	64.904	ENSPTRG00000016105	YTHDC1	58	58.482	Pan_troglodytes
ENSXMAG00000005196	ythdc1	61	64.904	ENSPANG00000021590	YTHDC1	56	60.000	Papio_anubis
ENSXMAG00000005196	ythdc1	94	57.329	ENSPKIG00000018497	ythdc1	75	61.009	Paramormyrops_kingsleyae
ENSXMAG00000005196	ythdc1	92	54.734	ENSPSIG00000002782	YTHDC1	60	58.628	Pelodiscus_sinensis
ENSXMAG00000005196	ythdc1	59	70.393	ENSPMGG00000000970	-	77	71.517	Periophthalmus_magnuspinnatus
ENSXMAG00000005196	ythdc1	61	64.908	ENSPEMG00000013850	Ythdc1	57	59.762	Peromyscus_maniculatus_bairdii
ENSXMAG00000005196	ythdc1	94	55.193	ENSPCIG00000006870	YTHDC1	92	52.656	Phascolarctos_cinereus
ENSXMAG00000005196	ythdc1	100	97.289	ENSPFOG00000013404	ythdc1	100	97.289	Poecilia_formosa
ENSXMAG00000005196	ythdc1	71	99.151	ENSPLAG00000011079	ythdc1	100	99.151	Poecilia_latipinna
ENSXMAG00000005196	ythdc1	100	97.590	ENSPMEG00000009238	ythdc1	100	97.590	Poecilia_mexicana
ENSXMAG00000005196	ythdc1	82	93.370	ENSPREG00000016973	ythdc1	90	93.738	Poecilia_reticulata
ENSXMAG00000005196	ythdc1	61	65.138	ENSPPYG00000014726	YTHDC1	65	59.545	Pongo_abelii
ENSXMAG00000005196	ythdc1	94	50.820	ENSPCOG00000019105	YTHDC1	55	55.059	Propithecus_coquereli
ENSXMAG00000005196	ythdc1	61	61.697	ENSPVAG00000015551	YTHDC1	56	55.752	Pteropus_vampyrus
ENSXMAG00000005196	ythdc1	94	79.782	ENSPNYG00000011687	ythdc1	94	80.908	Pundamilia_nyererei
ENSXMAG00000005196	ythdc1	94	62.866	ENSPNAG00000028365	ythdc1	92	59.398	Pygocentrus_nattereri
ENSXMAG00000005196	ythdc1	61	64.253	ENSRBIG00000028279	YTHDC1	58	58.744	Rhinopithecus_bieti
ENSXMAG00000005196	ythdc1	61	65.138	ENSRROG00000035028	YTHDC1	58	58.482	Rhinopithecus_roxellana
ENSXMAG00000005196	ythdc1	61	64.904	ENSSBOG00000022353	YTHDC1	56	60.000	Saimiri_boliviensis_boliviensis
ENSXMAG00000005196	ythdc1	94	53.914	ENSSHAG00000002538	YTHDC1	92	51.320	Sarcophilus_harrisii
ENSXMAG00000005196	ythdc1	94	60.991	ENSSFOG00015003298	ythdc1	58	67.299	Scleropages_formosus
ENSXMAG00000005196	ythdc1	94	80.377	ENSSMAG00000009086	ythdc1	94	80.377	Scophthalmus_maximus
ENSXMAG00000005196	ythdc1	94	81.832	ENSSDUG00000022008	ythdc1	94	81.522	Seriola_dumerili
ENSXMAG00000005196	ythdc1	94	80.247	ENSSLDG00000007926	ythdc1	94	81.211	Seriola_lalandi_dorsalis
ENSXMAG00000005196	ythdc1	61	64.220	ENSSARG00000010960	YTHDC1	72	59.318	Sorex_araneus
ENSXMAG00000005196	ythdc1	94	54.354	ENSSPUG00000009357	YTHDC1	61	59.071	Sphenodon_punctatus
ENSXMAG00000005196	ythdc1	94	83.075	ENSSPAG00000011449	ythdc1	94	83.075	Stegastes_partitus
ENSXMAG00000005196	ythdc1	61	64.908	ENSSSCG00000035505	YTHDC1	61	58.170	Sus_scrofa
ENSXMAG00000005196	ythdc1	94	55.182	ENSTGUG00000004452	-	59	59.864	Taeniopygia_guttata
ENSXMAG00000005196	ythdc1	99	66.968	ENSTRUG00000010142	ythdc1	85	75.094	Takifugu_rubripes
ENSXMAG00000005196	ythdc1	97	72.231	ENSTNIG00000013243	ythdc1	91	73.684	Tetraodon_nigroviridis
ENSXMAG00000005196	ythdc1	61	63.761	ENSTTRG00000005083	YTHDC1	57	58.093	Tursiops_truncatus
ENSXMAG00000005196	ythdc1	61	64.908	ENSUAMG00000010388	YTHDC1	60	59.629	Ursus_americanus
ENSXMAG00000005196	ythdc1	92	50.229	ENSUMAG00000013668	YTHDC1	61	50.985	Ursus_maritimus
ENSXMAG00000005196	ythdc1	94	53.529	ENSVPAG00000009040	YTHDC1	56	58.933	Vicugna_pacos
ENSXMAG00000005196	ythdc1	61	64.908	ENSVVUG00000005387	YTHDC1	61	59.202	Vulpes_vulpes
ENSXMAG00000005196	ythdc1	94	55.061	ENSXETG00000017960	ythdc1	57	63.981	Xenopus_tropicalis
ENSXMAG00000005196	ythdc1	52	100.000	ENSXCOG00000000530	ythdc1	85	100.000	Xiphophorus_couchianus