EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005265 (Gene tree)
Gene ID: 102229757
Gene Symbol: exosc2
Alias: fa97b01|wu:fa97b01|zgc:110117
Full Name: exosome component 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3341 bases
Position: chr8:14661426-14664766
Accession: 102229757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037707	ECR1_N	PF14382.6	9.5e-17	1	1
ENSXMAP00000005284	ECR1_N	PF14382.6	9.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000023133	-	1750	-	ENSXMAP00000037707	289 (aa)	-	-
ENSXMAT00000005290	-	1328	XM_005803734	ENSXMAP00000005284	293 (aa)	XP_005803791	M3ZSU1

Gene Model

Click here to download ENSXMAG00000005265's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005265	exosc2	99	76.712	ENSG00000130713	EXOSC2	99	76.712	Homo_sapiens
ENSXMAG00000005265	exosc2	90	95.455	ENSAPOG00000008861	exosc2	96	95.455	Acanthochromis_polyacanthus
ENSXMAG00000005265	exosc2	99	77.055	ENSAMEG00000016239	EXOSC2	99	77.055	Ailuropoda_melanoleuca
ENSXMAG00000005265	exosc2	99	96.233	ENSACIG00000019054	exosc2	99	96.233	Amphilophus_citrinellus
ENSXMAG00000005265	exosc2	99	95.548	ENSAOCG00000008577	exosc2	99	95.548	Amphiprion_ocellaris
ENSXMAG00000005265	exosc2	99	95.548	ENSAOCG00000004983	exosc2	99	95.548	Amphiprion_ocellaris
ENSXMAG00000005265	exosc2	99	95.548	ENSAPEG00000014088	exosc2	99	95.548	Amphiprion_percula
ENSXMAG00000005265	exosc2	99	95.548	ENSATEG00000018680	exosc2	99	95.548	Anabas_testudineus
ENSXMAG00000005265	exosc2	95	78.929	ENSAPLG00000012516	EXOSC2	97	78.929	Anas_platyrhynchos
ENSXMAG00000005265	exosc2	99	75.258	ENSACAG00000002706	EXOSC2	98	75.258	Anolis_carolinensis
ENSXMAG00000005265	exosc2	99	95.548	ENSACLG00000013613	exosc2	99	95.548	Astatotilapia_calliptera
ENSXMAG00000005265	exosc2	99	87.075	ENSAMXG00000042605	exosc2	99	87.075	Astyanax_mexicanus
ENSXMAG00000005265	exosc2	99	77.055	ENSBTAG00000048071	EXOSC2	99	77.055	Bos_taurus
ENSXMAG00000005265	exosc2	97	42.456	WBGene00022232	exos-2	94	42.456	Caenorhabditis_elegans
ENSXMAG00000005265	exosc2	99	76.712	ENSCJAG00000020537	EXOSC2	99	76.712	Callithrix_jacchus
ENSXMAG00000005265	exosc2	99	76.027	ENSCAFG00000019941	EXOSC2	99	76.027	Canis_familiaris
ENSXMAG00000005265	exosc2	99	76.027	ENSCAFG00020024047	EXOSC2	99	76.027	Canis_lupus_dingo
ENSXMAG00000005265	exosc2	99	76.712	ENSCHIG00000021398	EXOSC2	99	76.712	Capra_hircus
ENSXMAG00000005265	exosc2	99	75.685	ENSTSYG00000001805	EXOSC2	99	75.685	Carlito_syrichta
ENSXMAG00000005265	exosc2	99	72.881	ENSCPOG00000005902	EXOSC2	99	72.881	Cavia_porcellus
ENSXMAG00000005265	exosc2	99	76.712	ENSCCAG00000019749	EXOSC2	99	76.712	Cebus_capucinus
ENSXMAG00000005265	exosc2	99	76.712	ENSCATG00000025389	-	99	76.712	Cercocebus_atys
ENSXMAG00000005265	exosc2	99	76.027	ENSCLAG00000006195	EXOSC2	99	76.027	Chinchilla_lanigera
ENSXMAG00000005265	exosc2	99	76.712	ENSCSAG00000014760	EXOSC2	99	76.712	Chlorocebus_sabaeus
ENSXMAG00000005265	exosc2	99	75.685	ENSCHOG00000000858	EXOSC2	99	75.685	Choloepus_hoffmanni
ENSXMAG00000005265	exosc2	99	76.289	ENSCPBG00000022626	EXOSC2	99	76.289	Chrysemys_picta_bellii
ENSXMAG00000005265	exosc2	96	62.021	ENSCING00000014934	-	94	62.021	Ciona_intestinalis
ENSXMAG00000005265	exosc2	93	64.599	ENSCSAVG00000003684	-	100	64.493	Ciona_savignyi
ENSXMAG00000005265	exosc2	99	70.447	ENSCANG00000029298	-	99	70.447	Colobus_angolensis_palliatus
ENSXMAG00000005265	exosc2	99	76.712	ENSCANG00000039828	-	99	76.712	Colobus_angolensis_palliatus
ENSXMAG00000005265	exosc2	99	76.027	ENSCGRG00001013981	Exosc2	99	76.027	Cricetulus_griseus_chok1gshd
ENSXMAG00000005265	exosc2	99	76.027	ENSCGRG00000017629	Exosc2	99	76.027	Cricetulus_griseus_crigri
ENSXMAG00000005265	exosc2	99	91.781	ENSCSEG00000016539	exosc2	99	91.781	Cynoglossus_semilaevis
ENSXMAG00000005265	exosc2	99	96.575	ENSCVAG00000022260	exosc2	99	96.575	Cyprinodon_variegatus
ENSXMAG00000005265	exosc2	99	82.313	ENSDARG00000028688	exosc2	99	82.313	Danio_rerio
ENSXMAG00000005265	exosc2	92	77.154	ENSDNOG00000025767	-	100	77.154	Dasypus_novemcinctus
ENSXMAG00000005265	exosc2	99	77.055	ENSDORG00000009238	Exosc2	99	77.055	Dipodomys_ordii
ENSXMAG00000005265	exosc2	98	57.785	FBgn0034879	Rrp4	97	58.824	Drosophila_melanogaster
ENSXMAG00000005265	exosc2	92	64.815	ENSETEG00000016130	-	97	64.815	Echinops_telfairi
ENSXMAG00000005265	exosc2	99	76.370	ENSEASG00005008475	EXOSC2	86	76.370	Equus_asinus_asinus
ENSXMAG00000005265	exosc2	99	76.370	ENSECAG00000007897	EXOSC2	86	76.370	Equus_caballus
ENSXMAG00000005265	exosc2	99	90.816	ENSELUG00000013641	exosc2	99	90.816	Esox_lucius
ENSXMAG00000005265	exosc2	99	76.712	ENSFCAG00000025936	EXOSC2	99	76.712	Felis_catus
ENSXMAG00000005265	exosc2	99	74.570	ENSFALG00000001446	EXOSC2	99	74.570	Ficedula_albicollis
ENSXMAG00000005265	exosc2	99	75.000	ENSFDAG00000017196	EXOSC2	99	75.000	Fukomys_damarensis
ENSXMAG00000005265	exosc2	99	97.260	ENSFHEG00000018571	exosc2	99	97.260	Fundulus_heteroclitus
ENSXMAG00000005265	exosc2	99	86.780	ENSGMOG00000011785	exosc2	99	86.780	Gadus_morhua
ENSXMAG00000005265	exosc2	99	78.694	ENSGALG00000040373	EXOSC2	99	78.694	Gallus_gallus
ENSXMAG00000005265	exosc2	100	98.635	ENSGAFG00000010283	exosc2	100	98.635	Gambusia_affinis
ENSXMAG00000005265	exosc2	99	92.466	ENSGACG00000016805	exosc2	99	93.373	Gasterosteus_aculeatus
ENSXMAG00000005265	exosc2	88	79.231	ENSGAGG00000021026	EXOSC2	98	79.231	Gopherus_agassizii
ENSXMAG00000005265	exosc2	99	76.027	ENSGGOG00000010578	EXOSC2	99	76.027	Gorilla_gorilla
ENSXMAG00000005265	exosc2	99	95.890	ENSHBUG00000022437	exosc2	99	95.890	Haplochromis_burtoni
ENSXMAG00000005265	exosc2	99	76.027	ENSHGLG00000012834	EXOSC2	99	76.027	Heterocephalus_glaber_female
ENSXMAG00000005265	exosc2	99	76.027	ENSHGLG00100007092	EXOSC2	99	76.027	Heterocephalus_glaber_male
ENSXMAG00000005265	exosc2	99	91.781	ENSHCOG00000019130	exosc2	99	91.781	Hippocampus_comes
ENSXMAG00000005265	exosc2	99	85.324	ENSIPUG00000015397	exosc2	99	85.324	Ictalurus_punctatus
ENSXMAG00000005265	exosc2	99	76.027	ENSSTOG00000005999	EXOSC2	99	76.027	Ictidomys_tridecemlineatus
ENSXMAG00000005265	exosc2	99	76.027	ENSJJAG00000003188	Exosc2	99	76.027	Jaculus_jaculus
ENSXMAG00000005265	exosc2	100	96.246	ENSKMAG00000017397	exosc2	100	96.246	Kryptolebias_marmoratus
ENSXMAG00000005265	exosc2	99	92.466	ENSLBEG00000019269	exosc2	99	92.466	Labrus_bergylta
ENSXMAG00000005265	exosc2	99	79.863	ENSLACG00000015530	EXOSC2	99	79.863	Latimeria_chalumnae
ENSXMAG00000005265	exosc2	99	76.451	ENSLAFG00000006984	EXOSC2	99	76.451	Loxodonta_africana
ENSXMAG00000005265	exosc2	99	76.712	ENSMFAG00000000597	-	99	76.712	Macaca_fascicularis
ENSXMAG00000005265	exosc2	99	66.096	ENSMFAG00000034160	-	84	66.096	Macaca_fascicularis
ENSXMAG00000005265	exosc2	99	73.630	ENSMMUG00000012498	EXOSC2	99	73.630	Macaca_mulatta
ENSXMAG00000005265	exosc2	99	76.712	ENSMNEG00000031861	-	99	76.712	Macaca_nemestrina
ENSXMAG00000005265	exosc2	99	66.781	ENSMNEG00000028704	-	91	66.781	Macaca_nemestrina
ENSXMAG00000005265	exosc2	99	76.712	ENSMLEG00000042587	-	99	76.712	Mandrillus_leucophaeus
ENSXMAG00000005265	exosc2	99	66.781	ENSMLEG00000029891	-	91	66.781	Mandrillus_leucophaeus
ENSXMAG00000005265	exosc2	99	95.548	ENSMAMG00000012466	exosc2	99	95.548	Mastacembelus_armatus
ENSXMAG00000005265	exosc2	99	94.863	ENSMZEG00005018737	exosc2	99	94.863	Maylandia_zebra
ENSXMAG00000005265	exosc2	99	78.351	ENSMGAG00000005450	EXOSC2	99	78.351	Meleagris_gallopavo
ENSXMAG00000005265	exosc2	99	76.027	ENSMAUG00000008299	Exosc2	99	76.027	Mesocricetus_auratus
ENSXMAG00000005265	exosc2	99	77.055	ENSMICG00000015495	EXOSC2	99	77.055	Microcebus_murinus
ENSXMAG00000005265	exosc2	99	76.370	ENSMOCG00000008262	Exosc2	99	76.370	Microtus_ochrogaster
ENSXMAG00000005265	exosc2	99	93.836	ENSMMOG00000009616	exosc2	99	93.836	Mola_mola
ENSXMAG00000005265	exosc2	99	76.712	ENSMODG00000012114	EXOSC2	99	76.712	Monodelphis_domestica
ENSXMAG00000005265	exosc2	99	95.890	ENSMALG00000022132	exosc2	99	95.890	Monopterus_albus
ENSXMAG00000005265	exosc2	99	75.685	MGP_CAROLIEiJ_G0023415	Exosc2	99	75.685	Mus_caroli
ENSXMAG00000005265	exosc2	99	75.685	ENSMUSG00000039356	Exosc2	99	75.685	Mus_musculus
ENSXMAG00000005265	exosc2	99	75.342	MGP_PahariEiJ_G0024872	Exosc2	99	75.342	Mus_pahari
ENSXMAG00000005265	exosc2	99	75.685	MGP_SPRETEiJ_G0024332	Exosc2	99	75.685	Mus_spretus
ENSXMAG00000005265	exosc2	99	76.370	ENSMPUG00000012686	EXOSC2	99	76.370	Mustela_putorius_furo
ENSXMAG00000005265	exosc2	99	76.531	ENSMLUG00000008776	EXOSC2	99	76.531	Myotis_lucifugus
ENSXMAG00000005265	exosc2	99	76.027	ENSNGAG00000019383	Exosc2	99	76.027	Nannospalax_galili
ENSXMAG00000005265	exosc2	99	95.205	ENSNBRG00000005453	exosc2	99	95.205	Neolamprologus_brichardi
ENSXMAG00000005265	exosc2	99	76.712	ENSNLEG00000012533	EXOSC2	99	76.712	Nomascus_leucogenys
ENSXMAG00000005265	exosc2	100	60.068	ENSMEUG00000000795	EXOSC2	100	60.068	Notamacropus_eugenii
ENSXMAG00000005265	exosc2	57	79.394	ENSOPRG00000008688	EXOSC2	56	79.394	Ochotona_princeps
ENSXMAG00000005265	exosc2	86	78.656	ENSODEG00000019513	-	99	78.656	Octodon_degus
ENSXMAG00000005265	exosc2	99	75.000	ENSODEG00000016880	-	99	75.000	Octodon_degus
ENSXMAG00000005265	exosc2	99	95.205	ENSONIG00000014086	exosc2	99	95.205	Oreochromis_niloticus
ENSXMAG00000005265	exosc2	99	73.630	ENSOANG00000001044	EXOSC2	99	73.630	Ornithorhynchus_anatinus
ENSXMAG00000005265	exosc2	99	77.055	ENSOCUG00000007138	EXOSC2	99	77.055	Oryctolagus_cuniculus
ENSXMAG00000005265	exosc2	99	94.178	ENSORLG00000007443	exosc2	99	94.178	Oryzias_latipes
ENSXMAG00000005265	exosc2	99	93.836	ENSORLG00020018902	exosc2	99	93.836	Oryzias_latipes_hni
ENSXMAG00000005265	exosc2	99	93.493	ENSORLG00015006767	exosc2	99	93.493	Oryzias_latipes_hsok
ENSXMAG00000005265	exosc2	99	93.151	ENSOMEG00000003533	exosc2	99	93.151	Oryzias_melastigma
ENSXMAG00000005265	exosc2	99	76.712	ENSOGAG00000007558	EXOSC2	99	76.712	Otolemur_garnettii
ENSXMAG00000005265	exosc2	99	76.531	ENSOARG00000007438	EXOSC2	99	76.531	Ovis_aries
ENSXMAG00000005265	exosc2	99	76.712	ENSPPAG00000034796	EXOSC2	99	76.712	Pan_paniscus
ENSXMAG00000005265	exosc2	99	77.055	ENSPPRG00000001089	EXOSC2	99	77.055	Panthera_pardus
ENSXMAG00000005265	exosc2	99	77.055	ENSPTIG00000021163	EXOSC2	99	77.055	Panthera_tigris_altaica
ENSXMAG00000005265	exosc2	99	76.712	ENSPTRG00000021476	EXOSC2	99	76.712	Pan_troglodytes
ENSXMAG00000005265	exosc2	99	76.712	ENSPTRG00000045766	-	99	76.712	Pan_troglodytes
ENSXMAG00000005265	exosc2	99	76.712	ENSPANG00000025966	EXOSC2	99	76.712	Papio_anubis
ENSXMAG00000005265	exosc2	98	83.972	ENSPKIG00000004271	exosc2	98	83.972	Paramormyrops_kingsleyae
ENSXMAG00000005265	exosc2	99	75.945	ENSPSIG00000006743	EXOSC2	99	75.945	Pelodiscus_sinensis
ENSXMAG00000005265	exosc2	87	96.850	ENSPMGG00000010980	exosc2	100	96.850	Periophthalmus_magnuspinnatus
ENSXMAG00000005265	exosc2	99	76.370	ENSPEMG00000006345	Exosc2	99	76.370	Peromyscus_maniculatus_bairdii
ENSXMAG00000005265	exosc2	99	74.490	ENSPMAG00000001280	exosc2	99	74.490	Petromyzon_marinus
ENSXMAG00000005265	exosc2	99	76.712	ENSPCIG00000024122	EXOSC2	97	76.712	Phascolarctos_cinereus
ENSXMAG00000005265	exosc2	100	98.639	ENSPFOG00000019819	exosc2	100	98.639	Poecilia_formosa
ENSXMAG00000005265	exosc2	100	98.976	ENSPLAG00000004605	exosc2	100	98.976	Poecilia_latipinna
ENSXMAG00000005265	exosc2	100	98.976	ENSPMEG00000010976	exosc2	100	98.976	Poecilia_mexicana
ENSXMAG00000005265	exosc2	100	99.659	ENSPREG00000014306	exosc2	100	99.659	Poecilia_reticulata
ENSXMAG00000005265	exosc2	99	76.712	ENSPPYG00000019695	EXOSC2	99	76.712	Pongo_abelii
ENSXMAG00000005265	exosc2	99	77.397	ENSPCAG00000013400	EXOSC2	99	77.397	Procavia_capensis
ENSXMAG00000005265	exosc2	99	76.712	ENSPCOG00000017639	EXOSC2	99	76.712	Propithecus_coquereli
ENSXMAG00000005265	exosc2	99	76.027	ENSPVAG00000001513	EXOSC2	99	76.027	Pteropus_vampyrus
ENSXMAG00000005265	exosc2	99	95.890	ENSPNYG00000007383	exosc2	99	95.890	Pundamilia_nyererei
ENSXMAG00000005265	exosc2	99	88.055	ENSPNAG00000014281	exosc2	99	88.055	Pygocentrus_nattereri
ENSXMAG00000005265	exosc2	99	76.370	ENSRNOG00000009245	Exosc2	99	76.370	Rattus_norvegicus
ENSXMAG00000005265	exosc2	99	70.790	ENSRBIG00000029791	-	99	70.790	Rhinopithecus_bieti
ENSXMAG00000005265	exosc2	99	76.712	ENSRBIG00000031203	-	99	76.712	Rhinopithecus_bieti
ENSXMAG00000005265	exosc2	99	76.712	ENSRROG00000010827	-	99	76.712	Rhinopithecus_roxellana
ENSXMAG00000005265	exosc2	99	69.759	ENSRROG00000043609	-	99	69.759	Rhinopithecus_roxellana
ENSXMAG00000005265	exosc2	94	41.667	YHR069C	-	87	41.667	Saccharomyces_cerevisiae
ENSXMAG00000005265	exosc2	99	76.370	ENSSBOG00000022712	EXOSC2	99	76.370	Saimiri_boliviensis_boliviensis
ENSXMAG00000005265	exosc2	99	76.712	ENSSHAG00000016050	EXOSC2	99	76.712	Sarcophilus_harrisii
ENSXMAG00000005265	exosc2	99	85.223	ENSSFOG00015011245	exosc2	99	85.223	Scleropages_formosus
ENSXMAG00000005265	exosc2	99	93.493	ENSSMAG00000003112	exosc2	99	93.493	Scophthalmus_maximus
ENSXMAG00000005265	exosc2	99	93.898	ENSSDUG00000004634	exosc2	99	93.898	Seriola_dumerili
ENSXMAG00000005265	exosc2	99	94.863	ENSSLDG00000010616	exosc2	99	94.863	Seriola_lalandi_dorsalis
ENSXMAG00000005265	exosc2	99	76.871	ENSSPUG00000013391	EXOSC2	99	76.871	Sphenodon_punctatus
ENSXMAG00000005265	exosc2	99	95.548	ENSSPAG00000022947	exosc2	99	95.548	Stegastes_partitus
ENSXMAG00000005265	exosc2	99	77.397	ENSSSCG00000005704	EXOSC2	99	77.397	Sus_scrofa
ENSXMAG00000005265	exosc2	99	74.914	ENSTGUG00000004697	EXOSC2	99	74.914	Taeniopygia_guttata
ENSXMAG00000005265	exosc2	99	84.932	ENSTRUG00000022436	exosc2	99	84.932	Takifugu_rubripes
ENSXMAG00000005265	exosc2	99	71.918	ENSTTRG00000015159	EXOSC2	99	71.918	Tursiops_truncatus
ENSXMAG00000005265	exosc2	93	77.985	ENSUAMG00000009651	EXOSC2	99	75.812	Ursus_americanus
ENSXMAG00000005265	exosc2	99	77.055	ENSUMAG00000018726	EXOSC2	99	77.055	Ursus_maritimus
ENSXMAG00000005265	exosc2	99	76.027	ENSVVUG00000027665	EXOSC2	99	76.027	Vulpes_vulpes
ENSXMAG00000005265	exosc2	99	76.712	ENSXETG00000001340	exosc2	99	76.712	Xenopus_tropicalis