EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005482 (Gene tree)
Gene ID: 102227450
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 7371 bases
Position: chr9:30045830-30053200
Accession: 102227450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005504	RTC	PF01137.21	1e-86	1	1
ENSXMAP00000005504	RTC_insert	PF05189.13	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000005510	-	2543	XM_005808381	ENSXMAP00000005504	366 (aa)	XP_005808438	M3ZTG1

Gene Model

Click here to download ENSXMAG00000005482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005482	rtca	99	71.311	ENSG00000137996	RTCA	100	71.311	Homo_sapiens
ENSXMAG00000005482	rtca	100	90.164	ENSAPOG00000001345	rtca	100	90.164	Acanthochromis_polyacanthus
ENSXMAG00000005482	rtca	73	73.606	ENSAMEG00000008855	RTCA	100	73.606	Ailuropoda_melanoleuca
ENSXMAG00000005482	rtca	99	90.385	ENSACIG00000019643	rtca	100	90.385	Amphilophus_citrinellus
ENSXMAG00000005482	rtca	100	90.710	ENSAOCG00000014979	rtca	100	90.710	Amphiprion_ocellaris
ENSXMAG00000005482	rtca	100	90.710	ENSAPEG00000006945	rtca	100	90.710	Amphiprion_percula
ENSXMAG00000005482	rtca	95	91.404	ENSATEG00000006315	rtca	96	91.404	Anabas_testudineus
ENSXMAG00000005482	rtca	95	67.422	ENSAPLG00000015430	RTCA	100	67.422	Anas_platyrhynchos
ENSXMAG00000005482	rtca	99	71.311	ENSANAG00000025446	RTCA	100	71.311	Aotus_nancymaae
ENSXMAG00000005482	rtca	100	90.710	ENSACLG00000020770	rtca	100	90.710	Astatotilapia_calliptera
ENSXMAG00000005482	rtca	99	78.297	ENSAMXG00000043271	rtca	100	78.297	Astyanax_mexicanus
ENSXMAG00000005482	rtca	99	72.404	ENSBTAG00000006321	RTCA	100	72.404	Bos_taurus
ENSXMAG00000005482	rtca	99	71.585	ENSCJAG00000003398	RTCA	100	71.585	Callithrix_jacchus
ENSXMAG00000005482	rtca	99	71.311	ENSCAFG00000020010	RTCA	68	71.311	Canis_familiaris
ENSXMAG00000005482	rtca	99	71.311	ENSCAFG00020011528	RTCA	57	71.311	Canis_lupus_dingo
ENSXMAG00000005482	rtca	99	72.131	ENSCHIG00000018937	RTCA	100	72.131	Capra_hircus
ENSXMAG00000005482	rtca	99	72.131	ENSTSYG00000011305	RTCA	100	72.131	Carlito_syrichta
ENSXMAG00000005482	rtca	99	71.311	ENSCCAG00000021844	RTCA	100	71.311	Cebus_capucinus
ENSXMAG00000005482	rtca	99	69.657	ENSCATG00000019364	RTCA	100	72.492	Cercocebus_atys
ENSXMAG00000005482	rtca	86	73.418	ENSCLAG00000006125	RTCA	100	73.418	Chinchilla_lanigera
ENSXMAG00000005482	rtca	99	71.858	ENSCSAG00000001509	RTCA	100	71.858	Chlorocebus_sabaeus
ENSXMAG00000005482	rtca	98	71.468	ENSCHOG00000005211	RTCA	99	71.468	Choloepus_hoffmanni
ENSXMAG00000005482	rtca	99	68.219	ENSCPBG00000026658	RTCA	100	68.219	Chrysemys_picta_bellii
ENSXMAG00000005482	rtca	98	57.660	ENSCING00000007875	-	98	57.660	Ciona_intestinalis
ENSXMAG00000005482	rtca	98	57.103	ENSCSAVG00000007269	-	98	57.103	Ciona_savignyi
ENSXMAG00000005482	rtca	99	71.585	ENSCANG00000040106	RTCA	100	71.585	Colobus_angolensis_palliatus
ENSXMAG00000005482	rtca	73	71.747	ENSCGRG00001013163	Rtca	85	71.747	Cricetulus_griseus_chok1gshd
ENSXMAG00000005482	rtca	98	84.637	ENSCSEG00000000530	rtca	96	84.637	Cynoglossus_semilaevis
ENSXMAG00000005482	rtca	99	74.590	ENSCVAG00000021809	rtca	100	74.590	Cyprinodon_variegatus
ENSXMAG00000005482	rtca	99	78.297	ENSDARG00000002215	rtca	100	78.297	Danio_rerio
ENSXMAG00000005482	rtca	99	72.131	ENSDNOG00000000456	RTCA	100	72.131	Dasypus_novemcinctus
ENSXMAG00000005482	rtca	99	71.311	ENSDORG00000005448	Rtca	100	71.311	Dipodomys_ordii
ENSXMAG00000005482	rtca	97	39.216	FBgn0025630	Rtca	98	39.216	Drosophila_melanogaster
ENSXMAG00000005482	rtca	93	52.339	ENSEBUG00000008556	rtca	94	52.339	Eptatretus_burgeri
ENSXMAG00000005482	rtca	99	71.858	ENSEASG00005015926	RTCA	100	71.858	Equus_asinus_asinus
ENSXMAG00000005482	rtca	99	71.858	ENSECAG00000019831	RTCA	100	71.858	Equus_caballus
ENSXMAG00000005482	rtca	91	64.451	ENSEEUG00000001165	RTCA	100	64.451	Erinaceus_europaeus
ENSXMAG00000005482	rtca	99	76.519	ENSELUG00000003741	rtca	99	76.519	Esox_lucius
ENSXMAG00000005482	rtca	99	71.858	ENSFCAG00000024460	RTCA	100	71.858	Felis_catus
ENSXMAG00000005482	rtca	92	68.047	ENSFALG00000002443	RTCA	91	68.047	Ficedula_albicollis
ENSXMAG00000005482	rtca	98	58.011	ENSFDAG00000016084	-	100	58.011	Fukomys_damarensis
ENSXMAG00000005482	rtca	99	71.038	ENSFDAG00000012070	-	100	71.038	Fukomys_damarensis
ENSXMAG00000005482	rtca	70	75.486	ENSFHEG00000002868	rtca	92	83.721	Fundulus_heteroclitus
ENSXMAG00000005482	rtca	99	80.220	ENSGMOG00000013264	rtca	100	80.220	Gadus_morhua
ENSXMAG00000005482	rtca	99	68.219	ENSGALG00000005277	RTCA	100	68.219	Gallus_gallus
ENSXMAG00000005482	rtca	100	98.361	ENSGAFG00000011853	rtca	100	98.361	Gambusia_affinis
ENSXMAG00000005482	rtca	99	87.363	ENSGACG00000013497	rtca	100	87.363	Gasterosteus_aculeatus
ENSXMAG00000005482	rtca	80	67.577	ENSGAGG00000023306	RTCA	100	67.577	Gopherus_agassizii
ENSXMAG00000005482	rtca	99	70.765	ENSGGOG00000044018	-	100	70.765	Gorilla_gorilla
ENSXMAG00000005482	rtca	99	71.311	ENSGGOG00000009546	-	100	71.521	Gorilla_gorilla
ENSXMAG00000005482	rtca	100	90.437	ENSHBUG00000002114	rtca	100	90.437	Haplochromis_burtoni
ENSXMAG00000005482	rtca	99	71.585	ENSHGLG00000002617	RTCA	100	71.585	Heterocephalus_glaber_female
ENSXMAG00000005482	rtca	99	71.585	ENSHGLG00100006056	RTCA	100	71.585	Heterocephalus_glaber_male
ENSXMAG00000005482	rtca	99	76.164	ENSHCOG00000020628	rtca	90	76.164	Hippocampus_comes
ENSXMAG00000005482	rtca	99	77.747	ENSIPUG00000024803	rtca	100	77.747	Ictalurus_punctatus
ENSXMAG00000005482	rtca	99	63.388	ENSSTOG00000033099	-	100	63.388	Ictidomys_tridecemlineatus
ENSXMAG00000005482	rtca	99	66.667	ENSSTOG00000013528	-	100	66.667	Ictidomys_tridecemlineatus
ENSXMAG00000005482	rtca	99	52.603	ENSJJAG00000016178	Rtca	100	52.603	Jaculus_jaculus
ENSXMAG00000005482	rtca	100	90.437	ENSKMAG00000006651	rtca	100	90.437	Kryptolebias_marmoratus
ENSXMAG00000005482	rtca	99	87.258	ENSLBEG00000028971	rtca	99	87.258	Labrus_bergylta
ENSXMAG00000005482	rtca	87	85.893	ENSLBEG00000002448	-	99	85.893	Labrus_bergylta
ENSXMAG00000005482	rtca	99	67.671	ENSLACG00000013666	RTCA	100	67.671	Latimeria_chalumnae
ENSXMAG00000005482	rtca	99	74.247	ENSLOCG00000000093	rtca	99	74.247	Lepisosteus_oculatus
ENSXMAG00000005482	rtca	99	71.038	ENSLAFG00000001473	RTCA	100	71.038	Loxodonta_africana
ENSXMAG00000005482	rtca	99	71.858	ENSMFAG00000034132	RTCA	100	71.858	Macaca_fascicularis
ENSXMAG00000005482	rtca	99	71.858	ENSMMUG00000019105	RTCA	100	71.858	Macaca_mulatta
ENSXMAG00000005482	rtca	84	72.168	ENSMNEG00000037163	RTCA	100	72.168	Macaca_nemestrina
ENSXMAG00000005482	rtca	99	59.290	ENSMLEG00000042151	RTCA	100	59.290	Mandrillus_leucophaeus
ENSXMAG00000005482	rtca	99	91.758	ENSMAMG00000016536	rtca	100	91.758	Mastacembelus_armatus
ENSXMAG00000005482	rtca	100	90.710	ENSMZEG00005017945	rtca	100	90.710	Maylandia_zebra
ENSXMAG00000005482	rtca	87	68.553	ENSMGAG00000006892	RTCA	99	68.553	Meleagris_gallopavo
ENSXMAG00000005482	rtca	99	71.038	ENSMAUG00000008488	Rtca	100	71.038	Mesocricetus_auratus
ENSXMAG00000005482	rtca	84	72.816	ENSMICG00000008643	RTCA	100	72.816	Microcebus_murinus
ENSXMAG00000005482	rtca	99	70.219	ENSMOCG00000016660	Rtca	100	70.219	Microtus_ochrogaster
ENSXMAG00000005482	rtca	84	88.599	ENSMMOG00000007750	rtca	100	88.599	Mola_mola
ENSXMAG00000005482	rtca	99	71.858	ENSMODG00000003557	RTCA	100	71.858	Monodelphis_domestica
ENSXMAG00000005482	rtca	99	91.209	ENSMALG00000020844	rtca	100	91.209	Monopterus_albus
ENSXMAG00000005482	rtca	99	69.672	MGP_CAROLIEiJ_G0025565	Rtca	100	69.672	Mus_caroli
ENSXMAG00000005482	rtca	99	69.399	ENSMUSG00000000339	Rtca	100	69.399	Mus_musculus
ENSXMAG00000005482	rtca	99	69.672	MGP_PahariEiJ_G0027011	Rtca	100	69.672	Mus_pahari
ENSXMAG00000005482	rtca	99	69.672	MGP_SPRETEiJ_G0026515	Rtca	100	69.672	Mus_spretus
ENSXMAG00000005482	rtca	99	71.858	ENSMPUG00000012119	RTCA	100	71.858	Mustela_putorius_furo
ENSXMAG00000005482	rtca	99	67.847	ENSMLUG00000009922	RTCA	100	67.847	Myotis_lucifugus
ENSXMAG00000005482	rtca	99	70.492	ENSNGAG00000011540	Rtca	99	70.492	Nannospalax_galili
ENSXMAG00000005482	rtca	100	90.984	ENSNBRG00000003062	rtca	100	90.984	Neolamprologus_brichardi
ENSXMAG00000005482	rtca	99	71.585	ENSNLEG00000031426	RTCA	100	71.585	Nomascus_leucogenys
ENSXMAG00000005482	rtca	73	69.517	ENSOPRG00000012092	RTCA	71	69.517	Ochotona_princeps
ENSXMAG00000005482	rtca	95	72.126	ENSODEG00000006990	RTCA	96	72.365	Octodon_degus
ENSXMAG00000005482	rtca	100	91.257	ENSONIG00000007753	rtca	100	91.257	Oreochromis_niloticus
ENSXMAG00000005482	rtca	86	72.555	ENSOANG00000012055	RTCA	98	72.555	Ornithorhynchus_anatinus
ENSXMAG00000005482	rtca	99	71.858	ENSOCUG00000014247	RTCA	100	71.858	Oryctolagus_cuniculus
ENSXMAG00000005482	rtca	99	89.560	ENSORLG00000013605	rtca	100	89.560	Oryzias_latipes
ENSXMAG00000005482	rtca	99	89.835	ENSORLG00020001904	rtca	100	89.835	Oryzias_latipes_hni
ENSXMAG00000005482	rtca	99	89.560	ENSORLG00015021064	rtca	100	89.560	Oryzias_latipes_hsok
ENSXMAG00000005482	rtca	99	89.560	ENSOMEG00000000756	rtca	100	89.560	Oryzias_melastigma
ENSXMAG00000005482	rtca	99	66.940	ENSOGAG00000005627	RTCA	100	66.940	Otolemur_garnettii
ENSXMAG00000005482	rtca	86	72.642	ENSOARG00000018122	RTCA	100	72.642	Ovis_aries
ENSXMAG00000005482	rtca	99	68.602	ENSPPAG00000035119	RTCA	100	71.197	Pan_paniscus
ENSXMAG00000005482	rtca	99	71.858	ENSPPRG00000000350	RTCA	100	71.858	Panthera_pardus
ENSXMAG00000005482	rtca	99	71.585	ENSPTIG00000012816	RTCA	100	71.585	Panthera_tigris_altaica
ENSXMAG00000005482	rtca	99	68.602	ENSPTRG00000001004	RTCA	100	71.197	Pan_troglodytes
ENSXMAG00000005482	rtca	99	71.858	ENSPANG00000000346	RTCA	100	71.858	Papio_anubis
ENSXMAG00000005482	rtca	99	79.396	ENSPKIG00000001653	rtca	100	79.396	Paramormyrops_kingsleyae
ENSXMAG00000005482	rtca	99	67.945	ENSPSIG00000011408	RTCA	100	67.945	Pelodiscus_sinensis
ENSXMAG00000005482	rtca	99	70.219	ENSPEMG00000018582	Rtca	100	70.219	Peromyscus_maniculatus_bairdii
ENSXMAG00000005482	rtca	98	55.956	ENSPMAG00000009110	rtca	98	55.956	Petromyzon_marinus
ENSXMAG00000005482	rtca	99	71.585	ENSPCIG00000007684	RTCA	100	71.585	Phascolarctos_cinereus
ENSXMAG00000005482	rtca	99	97.808	ENSPFOG00000004824	rtca	100	97.808	Poecilia_formosa
ENSXMAG00000005482	rtca	100	97.814	ENSPLAG00000011753	rtca	100	97.814	Poecilia_latipinna
ENSXMAG00000005482	rtca	100	97.814	ENSPMEG00000020469	rtca	100	97.814	Poecilia_mexicana
ENSXMAG00000005482	rtca	100	97.814	ENSPREG00000001365	rtca	100	97.814	Poecilia_reticulata
ENSXMAG00000005482	rtca	99	71.858	ENSPPYG00000001115	RTCA	100	71.858	Pongo_abelii
ENSXMAG00000005482	rtca	99	68.852	ENSPCAG00000005076	RTCA	100	68.852	Procavia_capensis
ENSXMAG00000005482	rtca	99	72.131	ENSPCOG00000005603	RTCA	100	72.131	Propithecus_coquereli
ENSXMAG00000005482	rtca	99	67.546	ENSPVAG00000009478	RTCA	100	67.546	Pteropus_vampyrus
ENSXMAG00000005482	rtca	100	90.710	ENSPNYG00000004722	rtca	100	90.710	Pundamilia_nyererei
ENSXMAG00000005482	rtca	99	77.747	ENSPNAG00000022270	rtca	100	77.747	Pygocentrus_nattereri
ENSXMAG00000005482	rtca	99	69.672	ENSRNOG00000014575	Rtca	100	69.672	Rattus_norvegicus
ENSXMAG00000005482	rtca	99	68.865	ENSRBIG00000041180	RTCA	100	71.521	Rhinopithecus_bieti
ENSXMAG00000005482	rtca	99	71.311	ENSRROG00000024929	RTCA	100	71.311	Rhinopithecus_roxellana
ENSXMAG00000005482	rtca	99	70.765	ENSSBOG00000028626	RTCA	100	70.765	Saimiri_boliviensis_boliviensis
ENSXMAG00000005482	rtca	99	71.585	ENSSHAG00000001758	RTCA	100	71.585	Sarcophilus_harrisii
ENSXMAG00000005482	rtca	99	86.150	ENSSMAG00000014680	rtca	98	86.150	Scophthalmus_maximus
ENSXMAG00000005482	rtca	98	91.061	ENSSDUG00000015585	rtca	98	90.608	Seriola_dumerili
ENSXMAG00000005482	rtca	95	91.691	ENSSLDG00000018985	rtca	95	91.691	Seriola_lalandi_dorsalis
ENSXMAG00000005482	rtca	86	67.823	ENSSARG00000013993	RTCA	100	67.823	Sorex_araneus
ENSXMAG00000005482	rtca	100	91.257	ENSSPAG00000011938	rtca	100	91.257	Stegastes_partitus
ENSXMAG00000005482	rtca	99	71.858	ENSSSCG00000006865	RTCA	100	71.858	Sus_scrofa
ENSXMAG00000005482	rtca	99	69.315	ENSTGUG00000005154	RTCA	100	69.315	Taeniopygia_guttata
ENSXMAG00000005482	rtca	99	88.736	ENSTRUG00000008799	rtca	100	88.736	Takifugu_rubripes
ENSXMAG00000005482	rtca	99	86.538	ENSTNIG00000004725	rtca	100	86.538	Tetraodon_nigroviridis
ENSXMAG00000005482	rtca	57	57.143	ENSTBEG00000000943	RTCA	59	57.143	Tupaia_belangeri
ENSXMAG00000005482	rtca	99	69.657	ENSTTRG00000015327	RTCA	100	69.657	Tursiops_truncatus
ENSXMAG00000005482	rtca	95	70.029	ENSUAMG00000017265	RTCA	97	70.029	Ursus_americanus
ENSXMAG00000005482	rtca	99	71.311	ENSUMAG00000007881	RTCA	100	71.311	Ursus_maritimus
ENSXMAG00000005482	rtca	86	64.353	ENSVPAG00000001039	RTCA	84	64.353	Vicugna_pacos
ENSXMAG00000005482	rtca	99	71.311	ENSVVUG00000022041	RTCA	68	71.311	Vulpes_vulpes
ENSXMAG00000005482	rtca	99	57.766	ENSXETG00000031661	RTCA	99	57.766	Xenopus_tropicalis
ENSXMAG00000005482	rtca	99	87.912	ENSXCOG00000008002	rtca	100	87.912	Xiphophorus_couchianus