EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005529 (Gene tree)
Gene ID: 102238062
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: coiled-coil domain containing 86
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3190 bases
Position: chr5:15563645-15566834
Accession: 102238062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005536	Cgr1	PF03879.14	1.5e-15	1	1
ENSXMAP00000031737	Cgr1	PF03879.14	6.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000005542	-	2236	XM_005807173	ENSXMAP00000005536	294 (aa)	XP_005807230	M3ZTJ3
ENSXMAT00000036446	-	2794	-	ENSXMAP00000031737	249 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000005529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005529	si:ch211-217k17.7	100	64.430	ENSAPOG00000010968	si:ch211-217k17.7	100	64.548	Acanthochromis_polyacanthus
ENSXMAG00000005529	si:ch211-217k17.7	69	47.525	ENSAMEG00000007330	CCDC86	51	47.525	Ailuropoda_melanoleuca
ENSXMAG00000005529	si:ch211-217k17.7	100	62.171	ENSACIG00000020679	si:ch211-217k17.7	88	59.868	Amphilophus_citrinellus
ENSXMAG00000005529	si:ch211-217k17.7	100	63.758	ENSAOCG00000006303	si:ch211-217k17.7	100	63.758	Amphiprion_ocellaris
ENSXMAG00000005529	si:ch211-217k17.7	100	63.423	ENSAPEG00000015364	si:ch211-217k17.7	100	63.423	Amphiprion_percula
ENSXMAG00000005529	si:ch211-217k17.7	100	61.873	ENSATEG00000016386	si:ch211-217k17.7	93	63.958	Anabas_testudineus
ENSXMAG00000005529	si:ch211-217k17.7	51	60.526	ENSACAG00000017814	CCDC86	91	60.526	Anolis_carolinensis
ENSXMAG00000005529	si:ch211-217k17.7	50	61.538	ENSAMXG00000037666	si:ch211-217k17.7	78	61.538	Astyanax_mexicanus
ENSXMAG00000005529	si:ch211-217k17.7	65	49.515	ENSCATG00000031881	CCDC86	57	49.515	Cercocebus_atys
ENSXMAG00000005529	si:ch211-217k17.7	65	49.515	ENSCSAG00000006236	CCDC86	57	49.515	Chlorocebus_sabaeus
ENSXMAG00000005529	si:ch211-217k17.7	98	56.902	ENSCSEG00000002637	si:ch211-217k17.7	97	56.902	Cynoglossus_semilaevis
ENSXMAG00000005529	si:ch211-217k17.7	100	72.542	ENSCVAG00000003135	si:ch211-217k17.7	100	72.542	Cyprinodon_variegatus
ENSXMAG00000005529	si:ch211-217k17.7	85	50.769	ENSDARG00000059908	si:ch211-217k17.7	85	49.416	Danio_rerio
ENSXMAG00000005529	si:ch211-217k17.7	85	54.826	ENSELUG00000022687	si:ch211-217k17.7	84	53.160	Esox_lucius
ENSXMAG00000005529	si:ch211-217k17.7	86	51.751	ENSGMOG00000016242	-	91	50.000	Gadus_morhua
ENSXMAG00000005529	si:ch211-217k17.7	100	90.476	ENSGAFG00000005681	si:ch211-217k17.7	100	90.476	Gambusia_affinis
ENSXMAG00000005529	si:ch211-217k17.7	84	58.800	ENSGACG00000017630	si:ch211-217k17.7	99	57.312	Gasterosteus_aculeatus
ENSXMAG00000005529	si:ch211-217k17.7	94	63.121	ENSHBUG00000010352	si:ch211-217k17.7	100	61.639	Haplochromis_burtoni
ENSXMAG00000005529	si:ch211-217k17.7	51	56.173	ENSHGLG00000003464	CCDC86	61	47.945	Heterocephalus_glaber_female
ENSXMAG00000005529	si:ch211-217k17.7	62	54.124	ENSJJAG00000013786	Ccdc86	56	54.124	Jaculus_jaculus
ENSXMAG00000005529	si:ch211-217k17.7	100	68.013	ENSKMAG00000000919	si:ch211-217k17.7	99	67.677	Kryptolebias_marmoratus
ENSXMAG00000005529	si:ch211-217k17.7	97	58.824	ENSLBEG00000020547	-	93	57.785	Labrus_bergylta
ENSXMAG00000005529	si:ch211-217k17.7	65	50.526	ENSLAFG00000009449	CCDC86	51	50.526	Loxodonta_africana
ENSXMAG00000005529	si:ch211-217k17.7	65	48.058	ENSMLEG00000035102	-	57	49.029	Mandrillus_leucophaeus
ENSXMAG00000005529	si:ch211-217k17.7	98	62.626	ENSMAMG00000016395	si:ch211-217k17.7	99	59.933	Mastacembelus_armatus
ENSXMAG00000005529	si:ch211-217k17.7	100	61.311	ENSMZEG00005019822	si:ch211-217k17.7	100	61.639	Maylandia_zebra
ENSXMAG00000005529	si:ch211-217k17.7	100	59.197	ENSMMOG00000006446	si:ch211-217k17.7	100	58.194	Mola_mola
ENSXMAG00000005529	si:ch211-217k17.7	61	51.832	MGP_CAROLIEiJ_G0022707	-	56	51.020	Mus_caroli
ENSXMAG00000005529	si:ch211-217k17.7	65	52.356	ENSNGAG00000013322	Ccdc86	51	51.031	Nannospalax_galili
ENSXMAG00000005529	si:ch211-217k17.7	100	57.333	ENSNBRG00000013330	-	82	82.653	Neolamprologus_brichardi
ENSXMAG00000005529	si:ch211-217k17.7	100	62.252	ENSONIG00000017568	si:ch211-217k17.7	100	62.252	Oreochromis_niloticus
ENSXMAG00000005529	si:ch211-217k17.7	99	52.756	ENSORLG00000006331	-	96	57.040	Oryzias_latipes
ENSXMAG00000005529	si:ch211-217k17.7	99	52.610	ENSORLG00020021345	si:ch211-217k17.7	96	57.246	Oryzias_latipes_hni
ENSXMAG00000005529	si:ch211-217k17.7	99	53.150	ENSORLG00015021538	si:ch211-217k17.7	96	57.401	Oryzias_latipes_hsok
ENSXMAG00000005529	si:ch211-217k17.7	99	54.373	ENSOMEG00000007064	si:ch211-217k17.7	91	54.373	Oryzias_melastigma
ENSXMAG00000005529	si:ch211-217k17.7	99	44.528	ENSPKIG00000016503	si:ch211-217k17.7	97	47.651	Paramormyrops_kingsleyae
ENSXMAG00000005529	si:ch211-217k17.7	84	59.438	ENSPMGG00000023665	si:ch211-217k17.7	92	56.180	Periophthalmus_magnuspinnatus
ENSXMAG00000005529	si:ch211-217k17.7	98	93.197	ENSPFOG00000011617	si:ch211-217k17.7	99	93.197	Poecilia_formosa
ENSXMAG00000005529	si:ch211-217k17.7	98	92.857	ENSPLAG00000016122	si:ch211-217k17.7	99	92.857	Poecilia_latipinna
ENSXMAG00000005529	si:ch211-217k17.7	100	92.667	ENSPMEG00000018535	si:ch211-217k17.7	100	92.667	Poecilia_mexicana
ENSXMAG00000005529	si:ch211-217k17.7	100	90.333	ENSPREG00000005478	si:ch211-217k17.7	100	90.333	Poecilia_reticulata
ENSXMAG00000005529	si:ch211-217k17.7	71	53.081	ENSPNAG00000010886	si:ch211-217k17.7	85	53.234	Pygocentrus_nattereri
ENSXMAG00000005529	si:ch211-217k17.7	72	47.257	ENSRNOG00000020925	Ccdc86	69	48.085	Rattus_norvegicus
ENSXMAG00000005529	si:ch211-217k17.7	65	49.029	ENSRBIG00000042197	CCDC86	57	49.029	Rhinopithecus_bieti
ENSXMAG00000005529	si:ch211-217k17.7	93	63.273	ENSSMAG00000007686	si:ch211-217k17.7	91	62.857	Scophthalmus_maximus
ENSXMAG00000005529	si:ch211-217k17.7	99	59.289	ENSSDUG00000002689	si:ch211-217k17.7	94	62.547	Seriola_dumerili
ENSXMAG00000005529	si:ch211-217k17.7	90	65.038	ENSSLDG00000016681	si:ch211-217k17.7	99	63.123	Seriola_lalandi_dorsalis
ENSXMAG00000005529	si:ch211-217k17.7	100	65.886	ENSSPAG00000000367	si:ch211-217k17.7	100	65.217	Stegastes_partitus
ENSXMAG00000005529	si:ch211-217k17.7	98	52.083	ENSTRUG00000024101	si:ch211-217k17.7	100	52.083	Takifugu_rubripes
ENSXMAG00000005529	si:ch211-217k17.7	100	97.959	ENSXCOG00000011207	si:ch211-217k17.7	100	97.959	Xiphophorus_couchianus