EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005663 (Gene tree)
Gene ID: 106699678
Gene Symbol: -
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 82663 bases
Position: chr11:25671850-25754512
Accession: 106699678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005678	cwf21	PF08312.12	1.8e-15	1	1
ENSXMAP00000035800	cwf21	PF08312.12	1.8e-15	1	1
ENSXMAP00000005678	SRRM_C	PF15230.6	5.2e-23	1	1
ENSXMAP00000035800	SRRM_C	PF15230.6	5.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000005684	-	2039	-	ENSXMAP00000005678	640 (aa)	-	M3ZTY5
ENSXMAT00000040821	-	2145	XM_014469434	ENSXMAP00000035800	640 (aa)	XP_014324920	UPI0006D8ECE7

Gene Model

Click here to download ENSXMAG00000005663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005663	-	87	80.531	ENSAPOG00000000288	SRRM3	87	80.531	Acanthochromis_polyacanthus
ENSXMAG00000005663	-	87	76.460	ENSACLG00000005269	SRRM3	87	76.460	Astatotilapia_calliptera
ENSXMAG00000005663	-	87	52.422	ENSAMXG00000016051	-	54	55.866	Astyanax_mexicanus
ENSXMAG00000005663	-	87	43.514	ENSCPBG00000027784	SRRM3	52	47.253	Chrysemys_picta_bellii
ENSXMAG00000005663	-	88	70.261	ENSCSEG00000010978	-	80	70.537	Cynoglossus_semilaevis
ENSXMAG00000005663	-	100	97.344	ENSGAFG00000014777	SRRM3	100	97.344	Gambusia_affinis
ENSXMAG00000005663	-	87	43.328	ENSGAGG00000021058	SRRM3	60	45.910	Gopherus_agassizii
ENSXMAG00000005663	-	88	76.678	ENSHBUG00000005061	SRRM3	87	76.637	Haplochromis_burtoni
ENSXMAG00000005663	-	87	50.344	ENSIPUG00000012467	srrm3	87	52.696	Ictalurus_punctatus
ENSXMAG00000005663	-	88	81.501	ENSKMAG00000013495	SRRM3	87	80.986	Kryptolebias_marmoratus
ENSXMAG00000005663	-	53	55.618	ENSLOCG00000002879	SRRM3	99	56.461	Lepisosteus_oculatus
ENSXMAG00000005663	-	90	76.897	ENSMALG00000000844	-	89	77.032	Monopterus_albus
ENSXMAG00000005663	-	88	59.365	ENSONIG00000012732	-	57	63.352	Oreochromis_niloticus
ENSXMAG00000005663	-	88	76.748	ENSORLG00000026242	-	89	76.585	Oryzias_latipes
ENSXMAG00000005663	-	88	76.573	ENSORLG00020016592	-	89	76.408	Oryzias_latipes_hni
ENSXMAG00000005663	-	88	76.573	ENSORLG00015022712	SRRM3	89	76.408	Oryzias_latipes_hsok
ENSXMAG00000005663	-	100	73.416	ENSOMEG00000010768	-	88	75.795	Oryzias_melastigma
ENSXMAG00000005663	-	87	51.624	ENSPKIG00000017233	SRRM3	92	51.783	Paramormyrops_kingsleyae
ENSXMAG00000005663	-	88	67.572	ENSPFOG00000009007	SRRM3	89	64.395	Poecilia_formosa
ENSXMAG00000005663	-	87	95.170	ENSPMEG00000011981	-	87	94.275	Poecilia_mexicana
ENSXMAG00000005663	-	87	95.528	ENSPREG00000008138	-	87	95.528	Poecilia_reticulata
ENSXMAG00000005663	-	87	52.122	ENSPNAG00000009621	SRRM3	87	52.632	Pygocentrus_nattereri
ENSXMAG00000005663	-	56	56.104	ENSSFOG00015001696	SRRM3	74	62.379	Scleropages_formosus
ENSXMAG00000005663	-	88	78.735	ENSSMAG00000000476	SRRM3	89	78.735	Scophthalmus_maximus
ENSXMAG00000005663	-	87	78.547	ENSSLDG00000020070	SRRM3	87	78.893	Seriola_lalandi_dorsalis
ENSXMAG00000005663	-	68	80.000	ENSTNIG00000008549	-	71	80.000	Tetraodon_nigroviridis