EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005714 (Gene tree)
Gene ID: 102230926
Gene Symbol: -
Alias: -
Full Name: DEAH-box helicase 15
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 14652 bases
Position: chr5:15324435-15339086
Accession: 102230926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005744	DEAD	PF00270.29	2.4e-07	1	1
ENSXMAP00000029869	DEAD	PF00270.29	2.7e-07	1	1
ENSXMAP00000005744	HA2	PF04408.23	9.8e-24	1	1
ENSXMAP00000029869	HA2	PF04408.23	2.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028708	-	6703	XM_005807147	ENSXMAP00000029869	754 (aa)	XP_005807204	-
ENSXMAT00000005750	-	2136	-	ENSXMAP00000005744	711 (aa)	-	M3ZU51

Gene Model

Click here to download ENSXMAG00000005714's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005714	-	90	34.049	ENSCING00000016347	-	93	35.460	Ciona_intestinalis
ENSXMAG00000005714	-	99	94.347	ENSLBEG00000021832	-	99	94.347	Labrus_bergylta
ENSXMAG00000005714	-	90	65.205	YGL120C	PRP43	89	65.205	Saccharomyces_cerevisiae