EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005737 (Gene tree)
Gene ID: 102222475
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 10846 bases
Position: chr7:30872378-30883223
Accession: 102222475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005799	Symplekin_C	PF12295.8	6e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029814	-	696	-	ENSXMAP00000026994	231 (aa)	-	-
ENSXMAT00000005805	-	4850	XM_005812228	ENSXMAP00000005799	1214 (aa)	XP_005812285	M3ZUA6

Gene Model

Click here to download ENSXMAG00000005737's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03015	mRNA surveillance pathway	KEGG
xma04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005737	sympk	90	75.272	ENSG00000125755	SYMPK	85	80.000	Homo_sapiens
ENSXMAG00000005737	sympk	100	84.395	ENSAPOG00000015934	sympk	98	86.776	Acanthochromis_polyacanthus
ENSXMAG00000005737	sympk	90	75.453	ENSAMEG00000000680	SYMPK	86	75.453	Ailuropoda_melanoleuca
ENSXMAG00000005737	sympk	89	89.002	ENSACIG00000006357	sympk	91	89.002	Amphilophus_citrinellus
ENSXMAG00000005737	sympk	96	86.638	ENSAOCG00000024124	sympk	93	89.624	Amphiprion_ocellaris
ENSXMAG00000005737	sympk	100	84.641	ENSAPEG00000003465	sympk	91	89.730	Amphiprion_percula
ENSXMAG00000005737	sympk	99	84.020	ENSATEG00000008472	sympk	90	88.707	Anabas_testudineus
ENSXMAG00000005737	sympk	82	75.151	ENSACAG00000004126	SYMPK	83	75.151	Anolis_carolinensis
ENSXMAG00000005737	sympk	90	75.362	ENSANAG00000021087	SYMPK	96	76.329	Aotus_nancymaae
ENSXMAG00000005737	sympk	95	86.856	ENSACLG00000001813	sympk	90	89.321	Astatotilapia_calliptera
ENSXMAG00000005737	sympk	95	78.621	ENSAMXG00000013677	sympk	90	82.358	Astyanax_mexicanus
ENSXMAG00000005737	sympk	90	75.159	ENSBTAG00000012101	SYMPK	86	75.181	Bos_taurus
ENSXMAG00000005737	sympk	90	75.849	ENSCJAG00000012172	SYMPK	96	74.589	Callithrix_jacchus
ENSXMAG00000005737	sympk	90	75.453	ENSCAFG00000004376	SYMPK	86	75.453	Canis_familiaris
ENSXMAG00000005737	sympk	90	75.453	ENSCAFG00020001815	SYMPK	86	75.453	Canis_lupus_dingo
ENSXMAG00000005737	sympk	90	75.249	ENSCHIG00000026784	SYMPK	86	75.272	Capra_hircus
ENSXMAG00000005737	sympk	91	74.709	ENSTSYG00000006268	SYMPK	95	74.313	Carlito_syrichta
ENSXMAG00000005737	sympk	86	73.785	ENSCAPG00000005112	SYMPK	93	73.770	Cavia_aperea
ENSXMAG00000005737	sympk	93	74.074	ENSCPOG00000010434	SYMPK	88	75.000	Cavia_porcellus
ENSXMAG00000005737	sympk	90	75.272	ENSCCAG00000036309	SYMPK	97	76.141	Cebus_capucinus
ENSXMAG00000005737	sympk	93	73.928	ENSCATG00000045107	SYMPK	98	76.118	Cercocebus_atys
ENSXMAG00000005737	sympk	93	74.012	ENSCLAG00000001206	SYMPK	87	75.045	Chinchilla_lanigera
ENSXMAG00000005737	sympk	90	75.362	ENSCSAG00000003115	SYMPK	86	75.362	Chlorocebus_sabaeus
ENSXMAG00000005737	sympk	68	90.909	ENSCHOG00000012456	SYMPK	75	90.909	Choloepus_hoffmanni
ENSXMAG00000005737	sympk	89	75.460	ENSCPBG00000007170	SYMPK	88	74.819	Chrysemys_picta_bellii
ENSXMAG00000005737	sympk	88	47.952	ENSCING00000021232	-	97	47.952	Ciona_intestinalis
ENSXMAG00000005737	sympk	86	47.458	ENSCSAVG00000005154	-	100	47.458	Ciona_savignyi
ENSXMAG00000005737	sympk	93	73.339	ENSCANG00000040907	SYMPK	95	74.855	Colobus_angolensis_palliatus
ENSXMAG00000005737	sympk	83	74.320	ENSCGRG00001010086	Sympk	85	73.952	Cricetulus_griseus_chok1gshd
ENSXMAG00000005737	sympk	98	84.289	ENSCSEG00000016802	sympk	91	87.882	Cynoglossus_semilaevis
ENSXMAG00000005737	sympk	99	76.144	ENSDARG00000059553	sympk	93	78.351	Danio_rerio
ENSXMAG00000005737	sympk	97	71.609	ENSDNOG00000016149	SYMPK	86	75.000	Dasypus_novemcinctus
ENSXMAG00000005737	sympk	88	37.044	FBgn0037371	Sym	92	36.866	Drosophila_melanogaster
ENSXMAG00000005737	sympk	71	61.187	ENSEBUG00000000387	sympk	89	61.029	Eptatretus_burgeri
ENSXMAG00000005737	sympk	90	75.362	ENSEASG00005014227	SYMPK	87	75.362	Equus_asinus_asinus
ENSXMAG00000005737	sympk	90	75.362	ENSECAG00000008163	SYMPK	87	75.362	Equus_caballus
ENSXMAG00000005737	sympk	70	84.000	ENSEEUG00000000270	-	78	84.000	Erinaceus_europaeus
ENSXMAG00000005737	sympk	91	74.888	ENSFCAG00000007337	SYMPK	86	75.453	Felis_catus
ENSXMAG00000005737	sympk	90	74.728	ENSFDAG00000011272	SYMPK	87	74.774	Fukomys_damarensis
ENSXMAG00000005737	sympk	100	87.777	ENSFHEG00000010274	sympk	94	90.510	Fundulus_heteroclitus
ENSXMAG00000005737	sympk	89	82.733	ENSGMOG00000002357	sympk	99	82.733	Gadus_morhua
ENSXMAG00000005737	sympk	100	97.862	ENSGAFG00000010976	sympk	100	97.862	Gambusia_affinis
ENSXMAG00000005737	sympk	99	82.028	ENSGACG00000002735	sympk	99	86.697	Gasterosteus_aculeatus
ENSXMAG00000005737	sympk	65	68.045	ENSGAGG00000012538	-	86	73.994	Gopherus_agassizii
ENSXMAG00000005737	sympk	90	75.272	ENSGGOG00000003410	SYMPK	94	76.232	Gorilla_gorilla
ENSXMAG00000005737	sympk	95	86.770	ENSHBUG00000023564	sympk	90	89.231	Haplochromis_burtoni
ENSXMAG00000005737	sympk	90	71.105	ENSHGLG00000005228	SYMPK	86	71.105	Heterocephalus_glaber_female
ENSXMAG00000005737	sympk	91	75.248	ENSHGLG00100018571	SYMPK	88	75.248	Heterocephalus_glaber_male
ENSXMAG00000005737	sympk	89	82.934	ENSHCOG00000017400	sympk	90	82.934	Hippocampus_comes
ENSXMAG00000005737	sympk	89	81.543	ENSIPUG00000024020	SYMPK	89	81.108	Ictalurus_punctatus
ENSXMAG00000005737	sympk	90	75.362	ENSSTOG00000001534	SYMPK	87	75.407	Ictidomys_tridecemlineatus
ENSXMAG00000005737	sympk	93	74.035	ENSJJAG00000006633	Sympk	87	74.865	Jaculus_jaculus
ENSXMAG00000005737	sympk	99	85.644	ENSKMAG00000016292	sympk	91	89.856	Kryptolebias_marmoratus
ENSXMAG00000005737	sympk	99	83.088	ENSLBEG00000027913	sympk	95	86.723	Labrus_bergylta
ENSXMAG00000005737	sympk	89	69.881	ENSLACG00000016497	SYMPK	91	69.589	Latimeria_chalumnae
ENSXMAG00000005737	sympk	90	75.453	ENSLAFG00000008726	SYMPK	86	75.656	Loxodonta_africana
ENSXMAG00000005737	sympk	90	75.362	ENSMMUG00000015428	SYMPK	93	74.725	Macaca_mulatta
ENSXMAG00000005737	sympk	93	74.561	ENSMNEG00000019439	SYMPK	98	76.213	Macaca_nemestrina
ENSXMAG00000005737	sympk	93	74.386	ENSMLEG00000040508	SYMPK	98	76.118	Mandrillus_leucophaeus
ENSXMAG00000005737	sympk	94	86.655	ENSMAMG00000010486	sympk	92	88.283	Mastacembelus_armatus
ENSXMAG00000005737	sympk	95	86.856	ENSMZEG00005014146	sympk	90	89.321	Maylandia_zebra
ENSXMAG00000005737	sympk	89	75.000	ENSMAUG00000015657	Sympk	87	73.575	Mesocricetus_auratus
ENSXMAG00000005737	sympk	90	74.909	ENSMICG00000001871	SYMPK	90	74.340	Microcebus_murinus
ENSXMAG00000005737	sympk	97	71.453	ENSMOCG00000008388	Sympk	86	74.909	Microtus_ochrogaster
ENSXMAG00000005737	sympk	100	80.247	ENSMMOG00000019227	sympk	95	85.112	Mola_mola
ENSXMAG00000005737	sympk	89	75.894	ENSMODG00000021534	SYMPK	86	75.316	Monodelphis_domestica
ENSXMAG00000005737	sympk	77	85.638	ENSMALG00000008347	sympk	97	84.728	Monopterus_albus
ENSXMAG00000005737	sympk	97	71.537	MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	Mus_caroli
ENSXMAG00000005737	sympk	90	74.819	ENSMUSG00000023118	Sympk	76	85.321	Mus_musculus
ENSXMAG00000005737	sympk	90	74.819	MGP_PahariEiJ_G0021127	Sympk	77	85.321	Mus_pahari
ENSXMAG00000005737	sympk	90	74.909	MGP_SPRETEiJ_G0030351	-	77	85.321	Mus_spretus
ENSXMAG00000005737	sympk	90	74.161	ENSMPUG00000005505	SYMPK	86	74.161	Mustela_putorius_furo
ENSXMAG00000005737	sympk	74	72.031	ENSMLUG00000001359	SYMPK	90	72.031	Myotis_lucifugus
ENSXMAG00000005737	sympk	90	74.819	ENSNGAG00000000820	Sympk	86	74.819	Nannospalax_galili
ENSXMAG00000005737	sympk	92	86.388	ENSNBRG00000018101	sympk	92	89.242	Neolamprologus_brichardi
ENSXMAG00000005737	sympk	90	58.818	ENSNLEG00000002369	SYMPK	86	63.620	Nomascus_leucogenys
ENSXMAG00000005737	sympk	76	67.235	ENSMEUG00000003866	SYMPK	66	81.890	Notamacropus_eugenii
ENSXMAG00000005737	sympk	89	74.333	ENSOPRG00000009967	SYMPK	85	74.333	Ochotona_princeps
ENSXMAG00000005737	sympk	97	71.862	ENSODEG00000007519	SYMPK	86	75.181	Octodon_degus
ENSXMAG00000005737	sympk	92	88.104	ENSONIG00000016802	sympk	96	88.799	Oreochromis_niloticus
ENSXMAG00000005737	sympk	78	74.473	ENSOCUG00000005511	SYMPK	88	74.473	Oryctolagus_cuniculus
ENSXMAG00000005737	sympk	99	82.662	ENSORLG00000015338	sympk	97	86.297	Oryzias_latipes
ENSXMAG00000005737	sympk	99	82.815	ENSORLG00020004402	sympk	92	87.320	Oryzias_latipes_hni
ENSXMAG00000005737	sympk	99	82.744	ENSORLG00015005712	sympk	92	87.230	Oryzias_latipes_hsok
ENSXMAG00000005737	sympk	99	83.361	ENSOMEG00000022561	sympk	93	86.690	Oryzias_melastigma
ENSXMAG00000005737	sympk	90	75.362	ENSOGAG00000013483	SYMPK	86	75.362	Otolemur_garnettii
ENSXMAG00000005737	sympk	89	72.928	ENSOARG00000010349	SYMPK	85	72.928	Ovis_aries
ENSXMAG00000005737	sympk	90	75.272	ENSPPAG00000043204	SYMPK	94	74.588	Pan_paniscus
ENSXMAG00000005737	sympk	90	75.453	ENSPPRG00000004282	SYMPK	86	75.453	Panthera_pardus
ENSXMAG00000005737	sympk	93	73.114	ENSPTIG00000015420	SYMPK	92	75.568	Panthera_tigris_altaica
ENSXMAG00000005737	sympk	90	75.272	ENSPTRG00000011169	SYMPK	94	74.588	Pan_troglodytes
ENSXMAG00000005737	sympk	90	75.362	ENSPANG00000019930	SYMPK	98	76.118	Papio_anubis
ENSXMAG00000005737	sympk	90	83.439	ENSPKIG00000017132	sympk	91	82.566	Paramormyrops_kingsleyae
ENSXMAG00000005737	sympk	90	74.909	ENSPEMG00000007564	Sympk	86	74.909	Peromyscus_maniculatus_bairdii
ENSXMAG00000005737	sympk	85	65.613	ENSPMAG00000004936	sympk	100	65.451	Petromyzon_marinus
ENSXMAG00000005737	sympk	94	73.524	ENSPCIG00000024476	SYMPK	90	73.094	Phascolarctos_cinereus
ENSXMAG00000005737	sympk	100	97.451	ENSPFOG00000001194	sympk	100	97.451	Poecilia_formosa
ENSXMAG00000005737	sympk	100	97.451	ENSPLAG00000012995	sympk	100	97.451	Poecilia_latipinna
ENSXMAG00000005737	sympk	100	97.451	ENSPMEG00000008099	sympk	100	97.451	Poecilia_mexicana
ENSXMAG00000005737	sympk	100	96.721	ENSPREG00000006176	sympk	100	96.721	Poecilia_reticulata
ENSXMAG00000005737	sympk	89	75.691	ENSPPYG00000010135	SYMPK	97	75.691	Pongo_abelii
ENSXMAG00000005737	sympk	84	76.471	ENSPCAG00000005182	SYMPK	79	75.381	Procavia_capensis
ENSXMAG00000005737	sympk	93	74.035	ENSPCOG00000023740	SYMPK	97	75.714	Propithecus_coquereli
ENSXMAG00000005737	sympk	90	74.004	ENSPVAG00000001355	SYMPK	89	74.004	Pteropus_vampyrus
ENSXMAG00000005737	sympk	95	86.598	ENSPNYG00000011455	sympk	90	89.050	Pundamilia_nyererei
ENSXMAG00000005737	sympk	98	78.182	ENSPNAG00000016505	sympk	89	82.056	Pygocentrus_nattereri
ENSXMAG00000005737	sympk	97	71.285	ENSRNOG00000014353	Sympk	86	74.955	Rattus_norvegicus
ENSXMAG00000005737	sympk	93	73.928	ENSRBIG00000040963	SYMPK	96	76.329	Rhinopithecus_bieti
ENSXMAG00000005737	sympk	90	75.362	ENSRROG00000024834	SYMPK	95	76.063	Rhinopithecus_roxellana
ENSXMAG00000005737	sympk	90	75.181	ENSSBOG00000034497	SYMPK	95	74.588	Saimiri_boliviensis_boliviensis
ENSXMAG00000005737	sympk	91	74.196	ENSSHAG00000003139	SYMPK	96	74.482	Sarcophilus_harrisii
ENSXMAG00000005737	sympk	99	76.786	ENSSFOG00015006974	sympk	89	82.849	Scleropages_formosus
ENSXMAG00000005737	sympk	100	84.245	ENSSDUG00000007092	sympk	91	88.869	Seriola_dumerili
ENSXMAG00000005737	sympk	100	84.245	ENSSLDG00000014774	sympk	96	87.120	Seriola_lalandi_dorsalis
ENSXMAG00000005737	sympk	60	83.077	ENSSARG00000004274	-	59	83.077	Sorex_araneus
ENSXMAG00000005737	sympk	100	85.212	ENSSPAG00000000854	sympk	91	90.000	Stegastes_partitus
ENSXMAG00000005737	sympk	90	75.340	ENSSSCG00000003093	SYMPK	86	75.362	Sus_scrofa
ENSXMAG00000005737	sympk	100	81.699	ENSTRUG00000010202	sympk	91	85.714	Takifugu_rubripes
ENSXMAG00000005737	sympk	89	86.840	ENSTNIG00000017855	sympk	96	86.840	Tetraodon_nigroviridis
ENSXMAG00000005737	sympk	79	87.013	ENSTBEG00000000454	SYMPK	75	87.500	Tupaia_belangeri
ENSXMAG00000005737	sympk	90	67.362	ENSTTRG00000014311	SYMPK	86	67.391	Tursiops_truncatus
ENSXMAG00000005737	sympk	93	72.496	ENSUAMG00000022272	SYMPK	93	73.792	Ursus_americanus
ENSXMAG00000005737	sympk	90	75.453	ENSUMAG00000023698	SYMPK	86	75.453	Ursus_maritimus
ENSXMAG00000005737	sympk	92	74.709	ENSVVUG00000003024	SYMPK	94	75.941	Vulpes_vulpes
ENSXMAG00000005737	sympk	90	69.818	ENSXETG00000024453	sympk	90	70.718	Xenopus_tropicalis
ENSXMAG00000005737	sympk	88	97.683	ENSXCOG00000015368	sympk	100	97.683	Xiphophorus_couchianus