EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000005915 (Gene tree)
Gene ID: 102217222
Gene Symbol: brap
Alias: zgc:92894
Full Name: BRCA1 associated protein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 16951 bases
Position: chr8:24714386-24731336
Accession: 102217222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000005936	RRM_1	PF00076.22	0.00012	1	1
ENSXMAP00000028928	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000040893	-	3175	XM_005815074	ENSXMAP00000028928	590 (aa)	XP_005815131	UPI000293A024
ENSXMAT00000005942	-	1626	-	ENSXMAP00000005936	541 (aa)	-	M3ZUP3

Gene Model

Click here to download ENSXMAG00000005915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000005915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000005915	brap	86	88.723	ENSACIG00000018590	brap	97	91.915	Amphilophus_citrinellus
ENSXMAG00000005915	brap	97	77.901	ENSAOCG00000018827	brap	98	79.053	Amphiprion_ocellaris
ENSXMAG00000005915	brap	98	86.034	ENSACLG00000024094	brap	98	86.034	Astatotilapia_calliptera
ENSXMAG00000005915	brap	98	75.731	ENSAMXG00000041761	brap	99	75.085	Astyanax_mexicanus
ENSXMAG00000005915	brap	98	79.281	ENSCSEG00000012400	brap	98	79.898	Cynoglossus_semilaevis
ENSXMAG00000005915	brap	98	92.215	ENSCVAG00000006044	brap	98	92.215	Cyprinodon_variegatus
ENSXMAG00000005915	brap	100	78.305	ENSDARG00000008560	brap	97	79.478	Danio_rerio
ENSXMAG00000005915	brap	98	92.215	ENSFHEG00000020426	brap	98	92.215	Fundulus_heteroclitus
ENSXMAG00000005915	brap	94	83.993	ENSGMOG00000012362	brap	99	83.993	Gadus_morhua
ENSXMAG00000005915	brap	100	98.814	ENSGAFG00000005563	brap	100	98.814	Gambusia_affinis
ENSXMAG00000005915	brap	98	85.959	ENSHBUG00000010347	brap	98	85.959	Haplochromis_burtoni
ENSXMAG00000005915	brap	95	85.536	ENSHCOG00000004954	brap	97	84.348	Hippocampus_comes
ENSXMAG00000005915	brap	98	85.911	ENSMZEG00005008433	brap	98	85.911	Maylandia_zebra
ENSXMAG00000005915	brap	98	85.121	ENSMALG00000020336	brap	98	85.121	Monopterus_albus
ENSXMAG00000005915	brap	86	88.486	ENSNBRG00000018425	brap	97	91.489	Neolamprologus_brichardi
ENSXMAG00000005915	brap	98	76.125	ENSORLG00000000523	brap	98	76.125	Oryzias_latipes
ENSXMAG00000005915	brap	98	80.863	ENSPMGG00000017256	brap	98	81.056	Periophthalmus_magnuspinnatus
ENSXMAG00000005915	brap	100	97.797	ENSPLAG00000021393	brap	100	97.797	Poecilia_latipinna
ENSXMAG00000005915	brap	100	97.797	ENSPMEG00000016233	brap	100	97.797	Poecilia_mexicana
ENSXMAG00000005915	brap	100	98.305	ENSPREG00000016387	brap	100	98.305	Poecilia_reticulata
ENSXMAG00000005915	brap	98	85.959	ENSPNYG00000003247	brap	98	85.959	Pundamilia_nyererei
ENSXMAG00000005915	brap	100	79.492	ENSPNAG00000002344	brap	98	80.416	Pygocentrus_nattereri
ENSXMAG00000005915	brap	98	83.032	ENSSLDG00000010908	brap	98	86.643	Seriola_lalandi_dorsalis
ENSXMAG00000005915	brap	99	74.101	ENSSPUG00000010293	BRAP	98	76.503	Sphenodon_punctatus
ENSXMAG00000005915	brap	98	86.552	ENSSPAG00000015585	brap	98	86.598	Stegastes_partitus
ENSXMAG00000005915	brap	100	99.445	ENSXCOG00000010198	brap	95	99.445	Xiphophorus_couchianus